Heatmap: Cluster_37 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA49219 (VCV51_030339)
1.38 -4.02 -1.55 0.67 -3.82 -3.24 -3.28 -3.95 1.55 -1.59 -3.34 -1.73 -0.44 -4.04 -5.28 0.08 0.91 -1.33 -1.44 1.5 1.55 1.89 -1.33
KNA49670 (VCV51_033785)
1.29 -3.1 -0.28 0.38 -2.81 -3.09 -2.84 -3.14 0.8 0.7 -3.11 0.28 -0.73 -3.34 -1.85 0.86 1.56 -0.7 -0.56 0.67 0.63 0.91 0.08
KNA49671 (VCV51_030215)
1.34 -4.84 0.35 0.42 -4.18 -3.88 -3.98 -4.24 1.22 0.6 -4.19 0.78 -0.8 -4.96 -3.41 0.66 1.26 -1.39 -1.34 0.81 0.86 1.22 -0.71
KNA50121 (VCV51_033738)
0.74 -1.9 -0.92 0.65 -0.41 -0.02 -0.34 -0.81 0.83 0.61 -1.38 0.79 0.23 -1.71 -2.1 -0.01 -0.03 -0.4 -0.4 0.78 0.33 0.93 -1.4
KNA50222 (VCV51_030257)
1.02 -3.05 0.74 0.19 -1.59 -1.65 -1.6 -1.85 0.02 0.78 -1.4 1.28 0.63 -3.27 -1.91 1.08 1.43 -1.54 -1.32 -0.22 -0.22 0.3 -0.28
KNA51530 (VCV51_033570)
1.1 -2.84 0.1 0.0 -2.76 -2.72 -2.73 -3.04 1.14 1.04 -2.71 0.39 0.15 -2.79 -1.19 0.23 0.78 -1.44 -1.3 1.0 0.6 1.21 0.22
KNA51672 (VCV51_031489)
-0.45 -1.15 -1.17 -0.56 -0.69 -0.32 -0.39 -0.68 -0.6 0.38 1.88 -0.34 0.01 -1.22 0.44 0.35 -0.06 0.53 0.63 -0.6 0.1 -0.51 0.01
KNA51864 (VCV51_030394)
0.14 -0.75 -0.35 0.46 -0.67 -0.71 -0.59 -0.84 -0.21 0.03 0.13 0.42 -0.55 -0.79 -0.36 0.16 0.48 1.02 0.87 -0.22 -0.34 -0.07 0.42
KNA51865 (VCV51_030395)
-1.17 -0.57 -1.68 -1.39 -0.92 -0.88 -0.74 -1.06 -0.9 0.32 0.87 0.68 -0.06 -0.7 -0.76 0.92 0.74 1.5 1.4 -1.04 -0.98 -0.81 0.09
KNA51866 (VCV51_030396)
-0.49 -1.22 -1.05 -0.59 -0.82 -0.86 -0.84 -1.03 -0.52 0.28 1.19 0.64 -0.14 -1.31 -0.61 0.76 0.75 1.04 1.07 -0.65 -0.68 -0.26 0.27
KNA51867 (VCV51_030397)
-0.77 -1.32 -1.33 -1.0 -1.68 -1.41 -1.26 -1.72 -1.26 0.02 1.2 0.92 0.13 -1.46 -0.74 0.38 0.93 1.65 1.59 -1.29 -1.31 -0.74 0.33
KNA51869 (VCV51_030399)
-0.76 -1.39 -1.67 -1.03 -1.28 -1.26 -1.28 -1.51 -0.93 -0.31 2.95 0.33 -0.45 -1.65 -1.06 0.44 0.55 0.2 0.13 -0.95 -0.56 -0.69 -0.16
KNA51870 (VCV51_030400)
-0.93 -1.26 -2.19 -1.36 -1.0 -0.98 -1.06 -1.27 -0.64 -0.26 3.04 -0.55 -0.4 -1.54 -1.04 0.26 0.64 -0.04 0.05 -0.71 -0.74 -0.46 -0.15
KNA51871 (VCV51_030401)
-1.26 -1.71 -2.29 -2.04 -2.16 -1.72 -1.98 -1.86 -1.18 -0.96 3.67 -0.4 -1.36 -2.17 -1.32 -0.51 -0.44 -0.27 0.01 -1.3 -1.23 -0.62 -0.8
KNA51872 (VCV51_030402)
-1.05 -1.26 -2.51 -1.67 -1.09 -1.09 -1.02 -1.24 -0.69 -1.05 3.42 -0.95 -1.09 -1.18 -1.0 -0.41 -0.22 -0.37 -0.22 -0.84 -0.76 -0.46 -0.19
KNA51873 (VCV51_030403)
0.7 -1.46 -1.83 -1.7 -1.78 -1.49 -1.51 -1.91 -0.75 -0.06 2.56 -0.35 0.34 -1.62 -0.33 0.67 1.0 -1.99 -1.81 -0.96 -0.47 1.3 -0.49
KNA51913 (VCV51_033503)
0.88 -2.53 -0.58 0.59 -0.31 -0.16 -0.48 -0.74 1.22 -0.43 -1.35 0.53 -0.62 -2.08 -0.34 -1.49 -0.68 -0.51 -0.73 1.0 0.54 1.26 0.09
KNA52028 (VCV51_033490)
-0.38 -1.82 -2.2 -0.43 -1.23 -0.54 -0.74 -1.25 1.8 -0.53 -1.67 0.0 -0.87 -1.73 -1.74 -1.14 -0.45 -1.16 -1.32 1.67 1.27 1.78 0.21
KNA52270 (VCV51_033436)
0.58 -0.44 -1.5 -0.35 -1.35 -1.17 -1.23 -2.08 0.7 0.28 -1.36 -0.4 1.54 -0.69 -1.76 -0.35 -0.04 0.56 0.8 0.7 0.05 0.79 -0.06
KNA52273 (VCV51_033439)
1.18 -1.37 -3.16 0.26 -3.02 -3.15 -2.84 -2.96 0.46 0.38 -1.21 0.24 2.06 -1.56 -3.05 0.16 0.63 0.37 0.15 0.25 -0.45 0.61 0.15
KNA55333 (VCV51_031030)
1.08 -3.62 -1.0 0.85 -1.91 -1.9 -1.79 -2.15 0.07 1.25 -2.79 -0.17 0.59 -3.38 -2.88 1.09 1.33 0.08 0.2 0.47 0.47 0.19 -1.07
KNA57459 (CstA)
-1.51 -0.85 -2.34 -2.39 0.88 0.6 0.19 0.72 -1.77 -0.79 2.72 -0.15 0.44 -1.14 0.31 -1.72 -1.45 -1.26 -0.74 -1.58 -2.28 -1.18 0.57
KNA59820 (VCV51_030880)
-1.55 -0.09 2.52 -2.14 -2.12 -1.82 -1.76 -2.27 -1.6 0.02 2.34 -0.19 -0.62 -0.87 -1.57 0.17 0.27 -0.85 -0.7 -1.41 -1.56 -1.37 0.4
KNA59823 (VCV51_030882)
-2.05 -0.83 0.03 -2.7 -2.79 -2.55 -2.55 -2.91 -1.59 0.62 3.29 -0.65 0.36 -1.72 -1.22 0.99 0.78 -3.19 -2.83 -0.94 -1.39 -1.53 -0.18
KNA59824 (VCV51_030883)
-1.54 -1.37 0.19 -1.81 -2.61 -2.3 -2.21 -2.78 -1.78 0.91 2.81 0.28 0.5 -2.39 -1.41 1.32 1.27 -0.75 -0.74 -1.66 -1.95 -1.88 -0.34
KNA59871 (VCV51_032282)
-0.58 -0.1 -0.08 -0.47 -2.02 -1.92 -1.97 -2.22 -0.76 0.34 0.87 1.6 -0.46 -0.45 0.73 -0.07 0.46 0.72 0.85 -0.8 -1.36 -0.65 0.61
KNA59891 (VCV51_032302)
0.54 -0.7 -0.6 0.28 -0.93 -0.88 -0.67 -0.58 1.03 0.05 -0.49 -0.14 -0.21 -0.79 -0.51 -1.03 -0.56 -0.03 -0.08 0.96 0.78 1.24 -0.42
KNA59923 (VCV51_032334)
1.31 -0.89 -0.25 0.75 -2.34 -2.13 -2.07 -2.3 0.67 -0.72 -1.53 0.09 0.37 -1.27 -1.54 -0.73 -0.27 0.49 0.37 0.88 0.88 1.17 -0.19
KNA59973 (VCV51_032385)
-0.65 -0.68 0.12 -0.85 -1.79 -1.54 -1.62 -1.74 1.74 -1.21 -2.53 -0.56 -0.69 -0.67 -2.05 -1.29 -0.55 0.31 0.3 1.52 1.44 1.27 0.25
KNA59986 (VCV51_032398)
1.57 -2.99 0.39 1.15 -1.92 -1.84 -1.76 -2.06 0.67 0.79 -1.45 -0.51 -0.55 -3.01 -1.92 -0.59 -0.09 0.11 -0.08 0.5 0.88 0.99 -0.02
KNA60012 (VCV51_032424)
1.32 -6.28 -1.38 0.94 -6.38 -6.12 -6.26 -6.66 0.54 1.14 -3.38 0.37 1.71 -7.31 -5.32 1.03 1.47 -6.99 -6.66 0.87 0.07 0.74 -1.38
KNA60014 (VCV51_032426)
0.34 -1.46 -2.5 -0.85 -0.97 -1.5 -1.1 -0.91 1.9 0.02 0.49 -1.14 -0.88 -2.14 -3.02 -1.17 -0.09 -0.54 -0.64 1.38 1.2 1.69 -1.15
KNA60580 (VCV51_032251)
1.58 -3.33 -0.8 0.98 -2.09 -2.56 -3.11 -2.07 1.08 -0.45 -2.48 1.19 0.77 -3.29 -2.61 0.05 0.58 -4.76 -4.77 1.21 1.25 0.96 -3.68
KNA60581 (VCV51_032252)
1.39 -2.03 -1.16 0.66 -1.1 -1.74 -2.31 -1.23 0.5 0.76 -1.44 1.5 1.37 -1.96 -2.34 0.1 0.88 -4.44 -4.45 0.47 0.59 0.46 -3.19
KNA60647 (VCV51_032086)
0.9 -2.43 0.22 0.89 -0.5 -0.34 -0.16 -0.71 0.15 0.51 -1.68 0.22 0.87 -2.34 -1.29 0.22 0.72 -0.46 -0.32 0.2 0.46 -0.06 -0.55
KNA60648 (VCV51_032087)
1.02 -2.78 0.3 0.6 -1.51 -1.06 -0.87 -1.92 0.92 0.74 -2.03 0.39 1.35 -2.78 -2.98 -0.64 -0.0 -0.12 0.14 0.9 0.25 0.31 -0.86
KNA60649 (VCV51_032088)
0.5 -2.72 -0.36 -0.03 -2.45 -1.88 -1.89 -2.59 1.71 -0.02 -2.12 0.14 1.21 -2.77 -2.34 -0.02 0.65 -0.93 -0.78 1.62 0.59 0.86 -1.07
KNA60654 (VCV51_032093)
-1.56 -1.14 2.02 -2.1 -4.56 -4.19 -4.09 -4.89 -1.5 0.9 2.5 0.52 0.78 -1.97 -1.02 0.78 0.8 -2.63 -2.65 -1.47 -1.48 -1.42 0.13
KNA60655 (VCV51_032094)
-0.84 -0.94 1.42 -1.41 -2.55 -2.35 -2.26 -2.55 -1.07 0.15 2.71 0.26 0.19 -1.77 -0.93 0.31 0.44 0.05 0.01 -1.26 -0.93 -1.08 -0.34
KNA60660 (VCV51_032099)
0.2 -0.02 -1.27 -0.03 -1.64 -1.69 -1.64 -1.95 0.28 -0.1 0.98 -0.07 0.32 -0.24 -1.25 0.38 1.15 0.11 0.51 0.67 0.07 0.41 -0.55
KNA60661 (VCV51_032100)
0.95 -0.23 -1.61 0.89 -3.15 -2.95 -2.71 -3.29 1.08 -0.01 0.36 0.31 0.31 -0.63 -1.59 0.23 0.78 -2.04 -2.08 0.95 0.55 0.78 0.29
KNA60662 (VCV51_032101)
0.54 0.83 -1.32 0.31 -1.28 -1.37 -1.34 -1.69 -0.14 0.08 1.39 0.19 0.44 0.57 0.31 -0.02 0.57 -0.93 -0.95 -0.07 -0.32 -0.15 -0.63
KNA60663 (VCV51_032102)
-0.27 1.32 -2.37 -0.78 -1.86 -1.79 -1.53 -2.19 -0.2 -0.05 1.35 0.37 0.45 1.06 0.94 -0.27 0.16 -1.51 -0.93 0.08 -0.24 -0.01 0.0
KNA60664 (VCV51_032103)
-0.35 1.0 -2.37 -0.59 -1.59 -1.6 -1.54 -1.95 -0.18 -0.46 1.3 -0.17 0.35 0.88 1.4 -0.95 -0.57 -0.64 -0.08 0.34 0.16 0.17 0.11
KNA60700 (VCV51_032139)
-0.67 -0.11 -1.76 -1.06 0.02 -0.85 -0.98 0.2 -0.29 0.35 2.04 1.48 0.55 -0.61 -0.05 -0.31 -0.05 -2.18 -2.08 -0.52 0.15 -0.5 -0.69
KNA60779 (VCV51_032041)
0.44 -4.48 -0.27 0.19 -2.05 -1.58 -1.79 -2.32 1.52 0.0 -2.76 -0.22 0.3 -4.27 -4.21 0.11 0.72 -2.53 -2.57 1.51 1.01 1.59 0.48
KNA60829 (VCV51_032019)
0.46 -1.7 0.27 0.62 -1.33 -1.48 -1.38 -1.37 1.17 0.24 -1.95 0.74 0.26 -1.55 -1.95 -0.79 0.04 0.17 0.43 0.89 0.27 0.98 -0.37
KNA60917 (VCV51_031891)
-0.23 -1.45 -1.02 -0.63 0.3 0.12 0.11 -0.03 1.05 0.42 -0.64 -0.1 0.2 -1.52 -1.66 -1.18 -0.74 0.03 0.26 0.84 0.73 0.95 -0.28
KNA60982 (VCV51_031957)
-2.81 -0.28 1.5 -3.67 -1.88 -1.66 -1.58 -2.18 -1.45 -2.42 3.29 -0.08 -3.28 -0.96 1.02 -0.53 -0.95 -2.91 -2.45 -1.0 -0.35 -1.07 -0.34
KNA61001 (VCV51_031976)
1.62 -5.41 -1.06 0.74 -4.87 -4.96 -4.98 -5.21 1.22 -0.03 -0.69 -1.97 1.12 -5.92 -5.63 0.98 0.93 -4.44 -4.15 1.43 0.57 1.4 -1.19

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.