Heatmap: Cluster_34 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA44127 (VCV51_033968)
0.35 -2.94 1.15 -0.93 -1.71 -1.97 -1.92 -1.1 -1.14 0.25 -1.34 1.86 -3.97 -2.25 -2.31 -0.54 -2.35 -0.58 -0.57 -0.46 -1.04 -0.55 2.87
KNA44193 (VCV51_033961)
-0.39 -2.2 1.33 -2.61 -0.98 -2.44 -1.35 -0.94 0.7 -1.89 -3.1 0.42 - -2.27 -1.32 - -2.93 -2.34 -2.35 -0.04 -1.29 0.48 3.39
KNA44586 (VCV51_033944)
- -24.05 -11.91 -2.17 -12.58 -2.15 -17.3 -17.1 - -3.13 - 0.44 -2.21 - -1.24 - - - -29.47 - - -31.54 4.35
KNA46119 (VCV51_033913)
-3.03 -5.16 1.34 -3.11 -1.56 -3.14 -3.78 -2.26 -3.3 -4.13 -6.06 1.68 -3.55 -2.88 0.06 -4.01 -2.41 -2.29 -2.17 -2.88 -3.62 -3.53 3.79
KNA49218 (VCV51_030338)
-0.1 -0.0 -1.1 -0.62 -1.39 -1.14 -1.16 -1.34 -0.24 0.05 -0.38 0.59 0.18 0.09 -0.56 0.9 1.05 -0.21 -0.19 -0.15 1.05 0.14 0.55
KNA49229 (VCV51_030350)
-0.3 -1.19 -1.65 -0.51 -0.15 -0.2 -0.2 -0.44 0.31 0.14 -0.41 0.31 -0.01 -0.89 0.12 0.57 0.77 -0.03 -0.09 0.33 0.01 0.2 0.91
KNA49654 (VCV51_030210)
0.17 -2.09 -0.62 -1.3 -1.66 -1.29 -1.13 -1.92 0.14 0.73 -0.27 0.08 1.02 -2.12 -3.08 1.07 1.15 -1.88 -1.47 0.21 1.55 0.43 0.78
KNA49867 (VCV51_033770)
-1.65 -5.41 1.37 -1.63 -2.63 -2.53 -3.3 -3.22 -1.84 -2.11 -3.42 2.26 -3.12 -5.19 -0.69 -2.88 -2.68 -2.56 -3.24 -1.77 -3.18 -2.15 3.56
KNA49918 (VCV51_033765)
0.14 -4.24 1.47 0.57 -1.14 -0.46 -1.13 -1.74 -0.27 -1.04 -2.12 0.88 -1.85 -4.06 0.94 -2.48 -2.3 -1.73 -2.14 -0.37 -1.47 -0.46 2.85
KNA50239 (VCV51_033687)
-5.94 -5.43 1.91 -6.07 -2.54 -4.34 -4.43 -2.6 -4.67 -5.86 -8.36 0.24 -5.31 -5.09 -0.65 -5.27 -5.37 -3.96 -3.9 -5.02 -5.01 -4.95 4.05
KNA50365 (VCV51_033668)
-0.21 -0.67 -1.89 -0.76 0.24 0.06 0.05 0.05 -0.65 -0.46 -0.44 -0.09 -0.47 -0.58 -1.12 0.48 0.17 0.64 0.69 -0.82 -0.98 -0.62 2.02
KNA50390 (FliN)
-0.43 -1.7 0.83 -0.3 -0.74 -0.74 -0.62 -0.82 -1.01 0.5 -1.47 1.07 0.71 -1.87 -0.06 0.36 0.18 0.38 0.44 -0.94 0.01 -1.06 1.4
KNA50406 (FlaG)
0.58 -1.45 1.19 0.69 -2.01 -1.8 -1.87 -2.17 1.08 -0.44 -2.56 -0.03 -0.46 -1.5 -1.84 0.1 0.05 0.24 0.11 0.82 0.8 0.91 0.14
KNA50407 (VCV51_031430)
0.81 -1.95 0.37 0.83 -1.63 -1.41 -1.48 -1.86 1.15 -0.04 -2.69 0.68 0.05 -2.22 -2.3 -0.31 -0.31 0.08 0.19 0.82 0.66 0.9 0.24
KNA50932 (VCV51_033643)
-0.6 -1.01 -0.21 -0.81 -0.31 -0.34 -0.24 -0.56 0.25 0.3 -1.3 0.32 0.89 -1.19 -0.77 0.96 0.35 -0.62 -0.31 0.06 -0.33 -0.05 1.52
KNA51125 (VCV51_033626)
0.66 -2.66 1.57 0.64 -0.73 -0.72 -0.6 -0.97 -1.75 0.78 -0.83 0.59 1.18 -3.01 -0.3 0.97 0.43 -1.4 -0.76 -1.26 -1.9 -1.65 0.83
KNA51169 (VCV51_031669)
0.52 -1.26 -1.5 0.3 -0.83 -0.68 -0.44 -0.74 0.1 -0.76 -0.4 0.66 -0.87 -1.12 0.96 0.72 0.2 0.17 0.33 -0.18 -0.7 -0.14 1.33
KNA51528 (VCV51_033567)
0.43 -0.69 -0.48 0.28 -0.78 -0.62 -0.71 -0.72 0.24 -0.13 -1.09 0.74 -0.43 -0.91 -1.34 0.3 0.62 -0.51 -0.4 0.16 -0.3 0.19 1.78
KNA51651 (VCV51_033549)
0.48 -3.89 1.31 0.66 -2.69 -2.5 -2.53 -2.77 -0.67 -0.1 -2.67 0.26 0.32 -4.02 -2.91 1.41 1.35 -1.88 -1.63 -0.57 -0.98 -0.55 2.26
KNA51657 (VCV51_031503)
0.57 -1.07 -0.93 -0.38 -0.58 -0.52 -0.63 -0.63 -0.12 0.05 -0.87 0.14 0.1 -1.06 -1.02 0.98 0.76 0.01 0.25 -0.04 0.08 0.39 1.16
KNA51658 (VCV51_031502)
0.87 0.17 -1.25 -0.05 -2.16 -1.84 -2.0 -2.11 0.02 -0.41 -0.5 0.65 -0.86 0.08 -0.96 1.11 0.89 0.07 0.19 -0.11 -0.14 0.29 1.18
KNA51868 (VCV51_030398)
-0.82 -2.18 1.25 -0.87 -1.82 -1.44 -1.72 -1.83 -1.24 -1.2 1.15 -0.83 -1.54 -2.46 -1.94 0.06 0.41 0.37 0.43 -1.06 -0.98 -0.54 2.79
KNA52119 (VCV51_033488)
-0.39 -2.2 1.33 -2.61 -0.98 -2.44 -1.35 -0.94 0.7 -1.89 -3.1 0.42 - -2.27 -1.32 - -2.93 -2.34 -2.35 -0.04 -1.29 0.48 3.39
KNA52254 (VCV51_033419)
0.02 -1.42 0.32 0.08 -0.62 -0.6 -0.68 -0.76 -0.23 -1.1 -1.64 0.85 -0.99 -1.11 0.29 0.73 0.94 -1.69 -1.61 -0.1 -0.35 -0.17 2.11
KNA52421 (VCV51_030197)
0.45 -1.14 -0.16 -0.37 -2.02 -1.77 -1.82 -2.11 -0.44 0.73 -0.36 1.22 0.6 -1.25 -1.09 1.0 1.15 0.16 0.39 -0.32 -0.57 -0.07 0.56
KNA52478 (VCV51_030140)
-0.46 -1.68 -3.41 -2.07 -0.5 -0.57 -0.51 -0.52 -0.64 0.38 0.45 -0.16 1.48 -1.82 1.01 0.92 1.09 -0.16 0.28 -0.27 -0.15 -0.23 -0.25
KNA52701 (NrdR)
0.48 -1.56 0.57 -0.01 -0.1 -0.09 -0.12 -0.09 -1.04 0.65 -0.46 0.73 0.63 -1.86 0.95 0.37 0.12 -1.27 -0.07 -0.92 -1.0 -0.79 0.59
KNA53058 (VCV51_033362)
-1.46 -5.93 0.69 -1.92 0.21 -0.23 -0.18 0.02 -6.21 1.0 -0.22 1.29 0.51 -3.82 0.86 -3.92 -4.95 -1.73 -1.73 -5.61 -4.52 -6.31 2.89
KNA53580 (VCV51_030058)
-4.35 -5.25 2.41 -6.09 -2.55 -3.13 -3.09 -2.39 -4.45 -4.21 -5.32 0.98 -2.87 -6.63 -0.21 -3.06 -3.36 -3.76 -3.5 -4.39 -5.01 -5.11 3.74
KNA53633 (VCV51_033307)
-0.16 -2.65 -0.43 -0.59 -0.21 -0.09 -0.16 -0.35 -0.6 0.74 -1.04 -0.2 0.7 -2.57 -0.66 0.8 1.07 -0.83 -0.48 -0.36 -0.56 -0.44 1.87
KNA53678 (VCV51_030033)
0.27 -0.83 -1.65 -0.16 -1.22 -1.15 -1.15 -1.2 0.17 -0.76 -0.9 -0.27 -0.73 -0.79 1.86 0.08 0.33 -0.24 -0.19 0.23 0.03 0.6 1.39
KNA53926 (VCV51_030849)
-0.06 -1.91 -0.89 0.0 -2.35 -2.16 -2.01 -2.43 -0.04 0.58 -0.15 -0.43 1.09 -1.93 -1.13 1.01 0.43 -0.1 1.45 0.0 -0.01 -0.35 1.39
KNA54648 (VCV51_033219)
0.15 -1.47 0.08 -0.24 -1.52 -1.14 -1.28 -1.46 -0.33 0.96 0.05 1.01 0.39 -1.59 0.49 0.88 0.68 -1.6 -1.31 -0.15 -0.94 -0.19 1.46
KNA54962 (VCV51_033147)
0.49 -1.15 0.12 0.16 -1.24 -1.34 -1.37 -1.32 -0.19 -0.89 -0.58 0.49 -0.71 -1.08 0.37 0.04 0.61 -0.41 -0.39 0.24 0.03 -0.03 2.08
KNA55002 (VCV51_031734)
0.33 -1.24 -0.19 -0.46 -2.43 -2.09 -2.21 -2.51 -0.27 -0.96 -0.43 -0.31 -0.72 -1.15 -2.17 0.85 0.64 0.27 0.32 -0.51 -0.46 -0.15 2.72
KNA55045 (VCV51_033194)
- -6.0 1.47 -5.51 -1.55 -3.39 -2.82 -1.28 - -3.75 -7.19 2.29 -5.23 -2.61 1.43 - -6.32 -4.26 -3.03 -6.36 -5.27 -5.29 3.47
KNA55232 (VCV51_031077)
0.42 -2.01 -0.85 0.13 -0.51 -0.67 -0.74 -1.1 0.79 -0.24 -1.88 -0.27 -0.69 -2.32 -1.78 0.72 0.64 0.3 0.41 0.88 0.49 0.86 0.79
KNA55254 (VCV51_033067)
-0.22 0.21 -1.11 -0.78 -2.32 -1.62 -1.73 -2.4 -0.9 0.65 -0.9 0.86 1.39 -0.56 -1.11 1.13 1.01 -0.53 -0.6 -0.96 -1.78 -0.92 1.93
KNA55255 (VCV51_033068)
-0.15 0.38 -1.37 -0.97 -2.06 -1.15 -1.3 -2.24 0.13 0.66 -0.43 -0.33 1.61 -0.42 -1.1 0.12 -0.34 -0.16 -0.28 0.45 -0.32 0.25 1.67
KNA55256 (VCV51_033069)
0.56 -0.71 -1.09 -0.14 -1.65 -1.63 -1.62 -1.87 -0.21 0.76 -0.89 0.96 0.79 -0.61 -0.9 1.09 0.79 -0.44 -0.12 -0.03 -0.2 0.13 0.91
KNA55259 (VCV51_033072)
-0.62 0.35 -0.47 -0.97 -1.44 -0.94 -0.91 -1.25 -0.05 -0.23 -0.4 -0.1 1.01 -0.29 -0.27 1.04 0.66 0.4 0.16 -0.23 -0.18 -0.36 1.16
KNA55337 (VCV51_031033)
0.95 -0.48 0.59 0.63 -0.42 -0.73 -0.73 -1.04 0.67 -0.53 0.18 -0.79 -0.3 -0.74 -0.9 -0.49 -0.72 0.35 0.48 0.69 0.61 0.6 -1.91
KNA55645 (VCV51_030962)
1.38 -3.25 -1.26 0.33 -4.16 -4.21 -4.09 -4.31 -0.3 -0.7 -1.3 0.16 -0.11 -2.31 -3.18 1.42 1.31 0.38 0.48 -0.24 -0.5 0.6 1.71
KNA55658 (VCV51_030973)
0.6 -3.7 -1.19 -0.23 -2.05 -1.63 -1.56 -2.62 -0.29 3.36 -2.59 1.45 -1.57 -3.79 -2.46 -0.96 -0.89 -1.29 -1.53 -0.45 -0.43 -0.29 -1.45
KNA55659 (VCV51_033020)
-0.31 -4.85 -1.79 -1.39 -2.2 -1.86 -1.76 -2.61 0.57 2.81 -3.55 0.62 -2.47 -5.12 -4.58 -2.09 -1.93 -1.94 -2.22 0.19 -0.21 0.25 2.58
KNA55660 (VCV51_030974)
0.2 -7.21 -0.54 -0.53 -3.36 -2.54 -2.58 -3.91 1.17 3.44 -3.91 -0.11 -2.09 -7.35 -5.86 -1.13 -1.43 -2.57 -2.98 0.48 0.14 0.83 -2.49
KNA55678 (VCV51_030994)
0.76 -1.99 0.98 0.83 -0.95 -0.75 -0.87 -1.31 1.02 -0.04 -1.99 -1.21 -0.34 -2.07 -2.07 0.34 0.39 0.15 0.23 0.69 0.43 0.65 -0.16
KNA55699 (VCV51_031010)
1.0 -0.88 -0.49 0.65 -0.2 -0.46 -0.34 -0.34 0.23 -1.27 -0.68 0.15 -0.86 -1.06 -1.11 0.89 0.78 -0.67 -0.66 0.23 0.19 -0.0 1.03
KNA55851 (VCV51_033011)
0.59 -1.52 -1.72 0.46 -2.11 -1.82 -1.78 -1.91 0.79 -0.08 -0.98 0.03 -0.04 -1.4 -0.36 0.57 0.41 0.37 0.41 0.94 0.41 0.71 0.8
KNA56021 (VCV51_030937)
-0.59 0.22 -2.27 -1.4 -0.4 -0.39 -0.27 -0.45 -0.0 0.03 -0.47 0.26 0.3 0.24 -1.13 1.16 0.93 -1.18 -0.88 -0.02 0.92 0.03 0.75
KNA56285 (VCV51_030603)
0.52 -1.48 0.44 0.43 -1.41 -1.4 -1.37 -1.6 0.67 0.04 -1.87 -0.12 0.19 -1.58 -0.83 0.66 0.56 0.04 0.18 0.61 0.67 0.57 0.44
KNA56291 (VCV51_030609)
0.07 -0.36 -2.88 -1.02 -1.02 -1.07 -1.05 -1.05 0.2 -0.93 -0.49 -0.11 0.0 -0.28 -0.13 1.13 0.85 0.06 0.22 0.11 1.31 0.58 0.39
KNA56427 (VCV51_030697)
0.07 -0.79 -2.08 -0.49 -0.66 -0.48 -0.44 -0.79 0.41 0.27 -0.46 0.12 0.42 -0.98 -0.06 0.9 0.56 -0.7 -0.61 0.52 0.7 0.53 0.58
KNA56840 (VCV51_030479)
0.4 -0.81 -1.86 -0.41 -1.64 -1.49 -1.64 -1.9 0.54 0.51 -0.86 0.19 0.65 -0.96 -1.98 0.8 1.15 -0.48 -0.29 0.72 0.29 0.99 0.66
KNA56845 (VCV51_030484)
0.91 -2.11 -0.25 0.84 -3.02 -2.45 -2.6 -3.11 0.78 -0.2 -1.3 0.49 0.06 -2.34 -1.51 0.75 1.04 -0.3 -0.18 0.69 0.07 0.8 0.89
KNA56967 (VCV51_030586)
0.25 -0.96 -0.96 -0.62 -1.89 -2.14 -2.22 -2.05 -0.84 0.76 0.36 0.12 0.43 -1.43 -0.11 1.22 0.75 -2.76 -2.4 -0.73 -0.28 0.14 2.33
KNA57463 (VCV51_032849)
-0.35 -0.5 -1.36 -1.06 -2.08 -1.78 -1.63 -2.29 0.01 0.48 -0.58 0.43 0.75 -0.73 -0.65 1.07 1.35 -0.17 0.35 0.07 -0.17 0.37 1.14
KNA58540 (VCV51_031159)
0.53 -2.09 -1.14 0.49 -2.13 -0.33 -0.62 -2.92 0.89 1.51 -0.62 0.43 0.36 -2.37 -2.3 0.56 0.46 -1.88 -1.4 0.79 0.06 0.61 0.58
KNA58541 (VCV51_032723)
0.31 -1.84 -0.47 0.22 -1.52 -1.02 -0.99 -1.74 0.68 0.86 -0.24 0.16 0.16 -2.26 -1.27 0.97 0.96 -0.7 -0.4 0.58 0.04 0.37 0.78
KNA58542 (VCV51_031158)
0.46 -1.03 -0.6 0.15 -0.64 -0.74 -0.52 -0.9 0.71 -0.15 -0.31 0.77 -0.36 -1.15 -0.42 0.2 0.1 -0.21 -0.02 0.58 0.17 0.74 0.6
KNA58564 (VCV51_031139)
-0.69 -1.99 -0.86 0.47 0.45 0.77 0.66 0.59 -0.16 0.8 -2.37 -0.33 0.31 -2.08 -0.41 0.12 0.12 -1.18 -1.16 -0.05 0.35 -0.69 1.18
KNA58578 (VCV51_031128)
0.57 -0.14 -0.03 -0.66 -2.3 -2.31 -2.29 -2.47 -0.66 -0.07 -0.59 0.45 0.04 -0.51 -1.85 0.83 0.65 -1.34 -0.54 -0.4 0.3 0.52 2.24
KNA58603 (VCV51_031106)
0.7 -1.1 -1.03 0.07 -0.74 -0.42 -0.7 -0.3 0.28 -0.29 -0.66 0.9 -0.69 -1.16 -1.09 0.73 0.54 -0.02 0.13 0.33 0.09 0.74 0.43
KNA58608 (VCV51_031103)
0.52 -0.88 -1.43 -0.02 -2.06 -2.05 -1.91 -2.41 0.6 -0.49 -1.3 -0.01 -0.35 -1.0 -1.39 1.2 1.08 0.27 0.3 0.68 0.25 0.89 0.96
KNA58609 (VCV51_031102)
0.51 -0.83 -1.43 -0.17 -2.38 -1.96 -2.02 -2.33 0.61 -0.48 -0.94 0.21 -0.4 -0.77 -0.6 0.82 0.53 0.6 0.63 0.6 0.29 0.87 1.07
KNA58931 (RuvC)
-0.05 -2.2 0.38 0.15 -1.01 -1.07 -0.87 -0.86 -0.24 -0.83 -0.63 1.06 -0.89 -1.82 1.44 -1.05 -1.6 0.47 0.23 -0.43 -0.84 -0.44 2.09
KNA59328 (VCV51_031347)
0.24 -0.65 -1.82 -0.84 -0.48 -0.1 -0.05 -0.78 -0.48 0.3 -0.44 0.42 0.43 -0.75 0.52 0.99 0.82 -2.03 -1.32 -0.19 0.34 0.1 1.09
KNA59343 (DinG)
0.5 0.01 0.05 0.19 -0.82 -0.78 -0.79 -0.96 0.09 -0.7 -0.12 0.49 -1.17 0.03 0.14 0.82 0.59 -0.62 -0.36 -0.13 -0.13 0.42 0.79
KNA59385 (VCV51_031305)
0.7 -2.35 0.58 -0.61 -1.25 -0.98 -1.07 -1.32 0.48 -0.22 -0.62 0.31 1.22 -2.44 -1.32 0.5 0.62 -0.75 -0.39 0.73 0.48 0.59 0.36
KNA59403 (VCV51_032582)
0.22 -1.92 -0.66 0.23 0.25 0.14 0.04 0.11 -0.93 0.67 -0.56 -0.76 1.21 -1.96 -0.94 0.64 0.3 -1.14 -1.15 -0.71 -0.94 -0.92 1.83
KNA59421 (VCV51_031284)
0.23 -1.09 -0.95 -0.56 -0.75 -0.76 -0.87 -0.91 0.01 -0.59 -0.48 0.1 0.35 -1.31 -1.3 1.23 0.99 -0.67 0.02 0.37 -0.14 0.12 1.63
KNA59648 (VCV51_031368)
0.57 -2.1 -1.81 -0.18 -0.96 -0.98 -0.83 -1.31 0.39 -0.34 -1.92 -0.19 0.99 -1.9 -1.1 0.99 1.13 -0.43 -0.28 0.05 -0.47 0.63 1.65
KNA59929 (VCV51_032340)
-0.35 -0.5 -2.03 -0.71 -0.33 -0.33 -0.25 -0.4 0.21 0.41 -0.25 0.8 0.41 -0.59 -0.3 -0.25 0.11 -0.24 -0.15 0.02 -0.45 0.17 1.6
KNA59997 (VCV51_032409)
0.46 -2.0 -0.79 0.09 -1.44 -1.58 -1.41 -1.69 1.33 -1.33 -1.16 -0.07 -0.37 -1.69 -1.87 -0.17 0.36 -0.8 -0.54 0.78 0.33 0.99 2.1
KNA61013 (VCV51_031988)
0.27 -0.43 -0.32 0.22 -1.3 -0.47 -0.36 -1.82 0.6 0.38 -2.14 0.96 0.05 -0.79 -1.48 0.12 0.59 -2.29 -1.88 0.86 -1.84 0.18 1.85

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.