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Heatmap: Cluster_9 (HCCA)

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Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA48024 (VCV51_033859)
 86.13 102.96 33.72 61.71 152.26 213.59 183.49 121.2 113.98 142.08 172.5 98.49 51.31 239.23 79.46 139.76 136.21 79.11 85.2 86.9 96.82 106.17 115.62
KNA48530 (VCV51_030200)
 29.94 26.94 10.33 17.5 26.56 38.07 35.67 22.59 18.91 92.44 35.87 49.18 87.96 31.83 25.88 65.99 73.82 29.57 34.34 20.1 24.31 28.26 29.99
KNA49504 (VCV51_033792)
 35.12 41.15 19.17 33.81 13.74 20.12 15.65 16.57 42.34 38.08 36.23 69.47 41.76 49.57 22.14 85.05 93.54 117.86 106.86 39.55 28.59 38.72 33.25
KNA49505 (VCV51_033793)
 99.23 81.19 24.52 108.66 55.28 75.0 70.1 54.15 141.05 107.1 103.61 70.97 109.05 100.5 75.01 99.4 118.63 211.67 197.46 108.25 91.25 118.13 66.64
KNA49506 (VCV51_030308)
 170.45 64.75 62.75 201.14 66.53 100.33 87.36 72.33 156.62 215.16 133.9 145.65 179.93 78.07 60.2 156.68 181.44 336.02 307.92 124.56 108.27 146.28 134.94
KNA49507 (VCV51_030309)
 34.63 77.18 11.13 23.05 47.82 70.81 60.25 50.27 61.61 121.96 98.18 87.84 105.69 84.16 56.53 81.6 86.38 97.55 95.81 49.06 53.27 63.12 42.01
KNA51817 (VCV51_030368)
 52.7 112.85 31.6 48.77 68.6 98.34 90.21 72.04 65.88 208.53 153.7 188.48 167.2 149.38 117.05 212.91 220.04 394.76 334.87 59.99 57.56 60.77 76.73
KNA51844 (VCV51_033528)
 24.27 30.84 5.39 15.57 88.72 163.12 135.27 97.41 30.61 136.1 74.12 65.45 131.72 49.68 37.77 66.12 70.93 66.18 60.61 25.53 25.5 29.49 21.48
KNA51845 (VCV51_033529)
 33.31 45.38 10.49 17.4 80.59 133.32 107.75 80.59 33.84 112.4 60.04 57.77 105.84 76.45 25.69 34.49 38.58 67.04 63.05 27.92 27.7 37.13 28.07
KNA52464 (VCV51_030128)
 53.71 41.39 23.35 40.08 125.84 205.62 173.76 135.14 41.42 353.92 131.4 141.58 288.55 59.91 67.35 155.15 154.29 216.54 193.53 36.67 36.21 52.6 48.7
KNA53293 (VCV51_031610)
 165.06 219.82 113.22 98.73 147.36 201.12 179.44 148.2 154.04 202.68 307.1 191.61 218.23 249.32 188.8 233.8 135.95 402.12 375.78 143.62 200.05 184.74 171.21
KNA53795 (VCV51_031857)
 2867.0 1204.39 2950.5 2566.18 2525.62 2592.35 2813.73 2522.27 1940.55 6721.54 2198.91 5566.02 4187.7 973.86 3030.25 2403.54 2913.86 2715.84 2644.1 2278.82 2864.19 2281.8 1933.99
KNA53796 (VCV51_031858)
 1415.11 2050.02 812.43 1029.13 1166.62 1376.97 1547.44 1196.93 1388.47 3973.5 2140.98 3689.88 3008.32 1851.36 2267.11 1952.11 2155.47 2512.88 2523.1 1367.32 1385.66 1505.74 778.66
KNA53797 (VCV51_031859)
 904.97 2880.12 523.16 609.37 1292.48 1429.36 1572.85 1333.9 1071.43 2921.94 1978.72 2808.18 2476.83 2864.97 2201.16 1730.07 1920.72 1570.44 1528.69 1067.69 1020.64 1183.27 466.01
KNA53798 (VCV51_031860)
 876.22 1467.66 641.68 625.11 1407.83 1630.93 1817.0 1467.59 741.03 3992.1 1911.9 2932.92 2996.6 1305.96 2340.43 1947.54 2157.08 1835.06 1920.22 709.82 696.03 781.13 594.04
KNA53799 (VCV51_031861)
 787.66 2016.76 743.0 563.07 1792.45 1820.27 1992.26 1788.3 1066.7 3177.99 1999.11 2026.14 2641.56 1944.86 1941.36 1552.49 1819.29 1590.51 1702.9 1003.87 973.74 1125.67 885.47
KNA53800 (VCV51_031862)
 1725.39 4216.08 1357.37 1187.71 3270.95 3385.86 3705.08 3295.82 2487.16 4718.21 3669.84 3410.76 4410.18 4374.46 2366.82 2404.49 2249.49 2784.07 2921.32 2501.51 2410.89 2641.29 1365.49
KNA53801 (VCV51_031863)
 2065.58 1870.81 1697.92 1626.83 6478.11 6757.53 7262.28 6387.33 1279.31 11340.23 3419.28 4061.75 9281.6 1646.35 2110.72 4291.12 3419.28 2750.81 3133.61 1271.82 1266.26 1383.25 1158.94
KNA53802 (VCV51_031864)
 1672.56 1110.53 952.76 1195.45 1839.63 2007.39 2299.43 1748.12 1214.87 3494.1 2148.59 2302.53 3434.9 1088.62 1091.59 1958.76 1604.08 1610.14 1702.37 1148.95 1181.79 1329.36 1514.45
KNA53803 (VCV51_031865)
 1500.41 1006.25 2462.61 1063.7 2412.78 2614.44 2902.48 2187.93 1249.16 5586.86 1665.18 3930.87 4304.97 961.41 1306.83 4196.17 3605.06 1749.86 1913.43 1389.17 1406.71 1513.18 2348.77
KNA53806 (VCV51_031868)
 59.79 168.44 106.51 46.3 115.72 107.51 122.85 102.67 59.79 116.21 113.34 187.57 100.66 164.14 218.79 82.09 64.63 74.47 100.25 65.12 68.18 55.99 60.81
KNA53807 (GidA)
 33.4 184.59 62.22 24.21 99.04 109.67 118.76 96.77 51.61 127.23 137.05 205.92 106.14 168.72 190.07 81.59 68.86 83.54 105.16 41.7 39.23 45.54 80.14
KNA53845 (VCV51_030786)
 129.41 38.88 89.24 91.26 169.98 235.41 208.6 166.84 127.61 484.51 37.71 207.37 240.74 33.98 57.21 520.68 412.71 154.53 153.22 129.12 122.67 138.11 128.66
KNA54902 (VCV51_033130)
 49.58 77.06 16.62 37.46 168.98 266.69 221.96 175.34 87.01 434.57 148.6 124.94 299.46 105.6 62.14 83.01 92.98 183.01 160.67 83.65 76.42 87.59 39.84
KNA54903 (VCV51_031793)
 66.58 125.53 26.19 54.4 89.21 144.83 118.51 96.91 73.23 283.3 171.28 191.04 256.77 190.65 137.31 126.36 144.24 350.26 320.22 64.73 54.71 74.31 42.59
KNA54912 (VCV51_033135)
 381.14 880.21 85.89 296.12 4896.67 8077.09 6824.07 4425.61 706.44 10360.7 1450.69 1514.39 8670.95 1201.27 2454.94 1189.27 1308.13 688.03 593.0 673.5 575.29 620.08 150.3
KNA54913 (GroL)
 150.6 323.21 79.1 135.29 1419.8 2605.51 2266.27 1204.97 171.04 4573.52 490.81 1386.46 3620.52 416.23 1362.95 967.21 995.82 528.31 440.9 136.1 124.1 152.75 124.57
KNA54922 (VCV51_033138)
 365.4 398.96 101.87 193.41 377.96 477.02 453.21 388.11 325.63 441.57 487.81 389.39 429.85 370.94 204.02 400.89 497.35 187.07 199.03 332.72 283.72 438.88 328.92
KNA54923 (SecB)
 629.43 396.31 235.35 297.57 955.65 1225.34 1033.2 1013.75 383.36 1205.62 1278.91 912.3 1085.33 415.41 900.23 596.93 670.44 361.32 365.21 390.31 416.64 712.97 870.01
KNA54959 (VCV51_031749)
 10.78 2.29 7.07 7.57 7.47 10.15 10.07 7.92 6.07 39.3 12.16 17.61 17.9 2.59 28.09 4.95 6.39 5.41 6.14 5.02 5.56 5.78 29.48
KNA55097 (VCV51_031839)
 77.06 104.96 25.4 56.55 70.45 102.1 97.78 74.05 48.73 254.99 165.96 193.14 175.25 113.07 297.19 64.51 62.96 93.02 90.47 40.46 50.19 55.47 86.19
KNA55098 (VCV51_031838)
 144.53 386.99 40.78 85.09 211.16 246.3 234.59 214.49 172.07 270.44 247.87 233.73 212.58 378.0 233.42 168.73 197.39 123.19 113.37 146.68 180.76 203.47 49.78
KNA55680 (VCV51_033023)
 650.04 68.36 570.77 459.37 773.42 946.48 749.74 802.2 445.26 1352.43 321.98 605.58 831.56 72.91 159.85 1715.62 1486.98 677.36 656.17 488.54 499.49 512.12 509.91
KNA55695 (VCV51_031006)
 9.23 21.34 6.22 7.16 7.73 9.6 8.71 7.59 11.02 18.51 12.0 21.53 16.17 19.77 2.77 22.83 19.14 34.61 28.44 10.63 9.43 11.91 12.3
KNA55696 (VCV51_031007)
 8.27 39.47 4.85 6.94 19.43 27.03 23.14 21.62 7.85 38.31 29.7 55.25 25.93 40.74 4.18 19.63 13.73 22.28 24.71 6.66 5.42 7.59 9.48
KNA55697 (VCV51_031008)
 9.17 51.55 5.08 6.11 57.55 77.71 67.17 65.19 9.9 53.22 46.36 61.01 43.06 55.63 43.68 27.65 20.55 17.64 17.12 8.63 7.94 9.13 23.7
KNA55700 (VCV51_033027)
 30.08 18.04 26.29 24.73 50.17 89.94 73.59 55.15 61.4 111.04 27.68 49.98 66.93 17.69 42.14 41.21 35.4 92.19 90.94 50.6 45.92 50.53 37.21
KNA55705 (VCV51_031013)
 6.03 5.69 8.9 5.41 9.8 12.35 10.89 9.2 3.99 12.15 8.23 12.49 11.46 5.8 12.2 9.57 8.17 20.76 18.42 5.06 4.88 4.38 6.41
KNA56145 (VCV51_032985)
 61.88 17.67 16.68 49.08 33.67 54.02 44.44 32.61 52.56 138.91 38.49 68.71 100.29 23.14 51.42 112.45 100.24 71.51 66.13 48.82 35.85 61.27 82.83
KNA56277 (VCV51_032900)
 18.1 27.22 9.84 14.41 45.55 52.41 44.32 45.96 24.57 45.85 27.9 40.57 30.2 49.09 22.94 78.15 69.42 39.95 38.88 24.72 23.61 30.39 33.43
KNA56278 (VCV51_030596)
 13.93 16.3 3.74 10.0 67.81 116.69 99.42 70.13 22.38 142.96 34.37 51.49 97.28 25.61 20.05 127.65 67.15 33.23 33.31 19.72 19.22 28.87 31.25
KNA56413 (VCV51_030684)
 32.82 29.83 3.48 29.8 65.88 79.53 70.64 54.15 48.03 114.05 71.58 24.03 100.95 42.57 11.64 58.89 48.02 53.64 45.74 44.13 36.76 35.84 20.9
KNA56420 (VCV51_030689)
 56.47 208.79 24.33 46.13 966.91 1530.87 1289.28 858.03 61.27 956.84 189.42 357.48 909.81 331.72 424.71 439.63 324.57 322.4 303.88 56.3 55.55 49.68 53.05
KNA56847 (VCV51_032859)
 887.0 1947.42 1453.64 724.05 3837.75 3992.37 4069.98 3801.18 1068.06 3560.15 2307.6 2500.61 3307.54 1831.45 1601.99 4177.79 4596.99 6309.82 6797.03 1061.02 1104.82 885.62 2954.7
KNA56854 (VCV51_030491)
 620.84 737.31 257.98 357.55 1014.94 1158.19 995.59 970.28 259.04 1115.59 852.61 614.47 967.05 732.37 339.51 867.92 884.21 253.85 271.89 304.63 451.19 430.59 648.69
KNA56912 (VCV51_032867)
 36.9 7.92 23.65 32.94 8.33 10.34 11.18 6.83 48.53 103.27 18.5 44.37 88.04 11.0 15.96 73.32 84.48 15.56 13.75 49.67 55.12 57.03 95.4
KNA56954 (VCV51_030577)
 29.66 38.56 19.76 22.59 127.27 97.74 113.91 101.03 43.45 71.99 30.54 70.69 60.25 36.48 103.38 18.78 16.17 36.76 42.29 34.69 37.18 40.13 47.36
KNA56955 (VCV51_030578)
 67.49 30.37 33.83 60.83 167.99 143.47 155.99 128.53 45.03 165.98 50.59 72.73 129.67 27.25 128.91 52.99 44.12 67.73 69.58 47.68 44.66 44.5 79.86
KNA56959 (GrpE)
 105.76 225.96 52.75 84.74 1159.06 1508.18 1290.93 1116.43 149.99 1050.5 335.25 351.43 788.76 281.02 259.89 401.06 311.15 375.08 344.98 159.17 141.67 147.48 228.05
KNA56960 (DnaK)
 362.12 501.96 74.12 303.47 819.47 1492.96 1203.21 874.65 496.95 2015.76 780.97 752.02 1806.81 761.08 654.69 1014.21 821.62 2140.02 1625.96 463.71 418.86 481.52 144.11
KNA56961 (DnaJ)
 36.29 42.87 14.56 28.73 63.84 88.16 80.39 56.03 17.42 147.38 69.03 97.73 147.49 68.77 66.0 77.55 57.75 205.26 177.71 18.55 17.79 23.74 20.92
KNA57481 (ClpB)
 57.34 43.14 18.77 61.5 108.68 198.21 163.04 107.84 45.45 404.5 63.25 127.33 385.34 63.07 53.75 211.08 230.64 558.16 432.05 44.79 39.66 45.48 28.33
KNA59402 (VCV51_032581)
 69.75 130.74 29.93 51.93 218.46 308.87 267.9 206.44 69.18 378.0 197.61 235.93 297.04 192.0 170.4 233.3 179.71 201.84 197.89 61.41 54.76 75.08 82.69
KNA59420 (VCV51_031285)
 27.23 36.4 6.68 22.07 43.39 55.28 47.06 46.12 32.99 130.89 70.39 60.45 111.07 52.5 24.68 97.49 81.86 45.67 38.71 30.08 26.32 29.38 26.32
KNA59763 (VCV51_032458)
 131.11 15.5 378.04 138.0 1746.18 3412.2 3100.81 1184.41 72.35 4266.98 24.4 256.07 4093.96 32.31 1444.37 1965.98 1750.86 548.24 419.3 87.55 73.67 78.65 177.95
KNA59764 (GroL)
 8.72 26.53 7.96 7.99 162.44 408.07 395.61 118.22 11.37 976.91 6.42 96.22 874.79 43.33 537.82 243.0 269.49 49.56 38.12 11.23 11.55 12.13 13.95
KNA59765 (VCV51_032460)
 17.4 88.32 17.65 12.92 435.43 956.28 911.88 323.34 27.07 1770.77 16.37 121.13 1663.43 175.33 1370.7 255.6 293.11 76.31 61.83 26.44 20.36 25.62 21.22
KNA59817 (VCV51_032499)
 26.08 36.7 10.09 22.09 268.17 444.1 308.23 306.0 50.04 202.23 59.3 82.02 158.27 43.82 78.35 59.42 64.04 101.15 72.88 49.15 44.39 46.24 36.34
KNA59902 (VCV51_032313)
 6.62 9.05 6.78 3.93 30.48 32.13 30.81 33.2 10.1 19.57 7.23 23.12 20.91 8.11 30.55 5.7 8.61 13.61 13.53 8.76 8.19 9.25 11.24
KNA60001 (VCV51_032413)
 25.7 25.36 6.97 20.5 5.09 6.81 6.78 5.33 37.84 287.58 75.46 69.21 193.51 20.81 187.33 24.66 24.68 9.85 9.36 40.87 44.91 52.66 112.28
KNA60002 (VCV51_032414)
 54.76 20.13 20.12 52.13 0.07 0.17 0.22 0.2 60.17 457.59 100.74 96.57 298.5 15.49 219.72 38.23 38.35 20.4 17.87 64.51 70.06 78.43 270.15
KNA60782 (VCV51_032044)
 34.44 51.22 9.63 29.14 39.56 35.77 34.43 37.58 37.91 44.63 138.46 76.55 46.08 42.32 43.41 30.84 46.51 184.64 131.88 34.61 35.09 41.27 67.3
KNA60937 (VCV51_031911)
 47.12 78.99 110.49 45.85 152.26 137.2 115.59 143.84 51.72 583.05 135.62 151.73 288.9 93.86 128.05 104.32 120.43 53.53 55.17 51.52 41.75 47.99 190.65

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)