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Heatmap: Cluster_20 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA49118 (VCV51_033806)
 0.88 -2.04 -0.37 -0.41 -3.51 -3.24 -3.11 -3.69 -0.41 0.42 -0.7 0.59 1.11 -2.28 -2.79 1.2 1.56 -1.05 -0.89 -0.03 -0.66 0.43 1.62
KNA49209 (VCV51_030328)
 0.06 -1.12 -0.97 -0.65 -0.53 -0.61 -0.52 -0.53 -0.47 -0.33 -0.49 0.71 -0.35 -1.11 0.5 1.1 1.16 -0.22 0.01 -0.35 -0.37 -0.27 1.28
KNA49488 (VCV51_030297)
 0.05 0.1 -1.25 -1.04 -0.98 -0.7 -0.64 -1.25 -0.0 -0.07 0.07 0.4 0.24 0.05 0.0 1.04 1.32 -0.63 -0.5 0.11 -0.15 0.4 0.09
KNA49502 (VCV51_030306)
 0.56 -1.56 -1.16 0.44 0.12 0.0 -0.08 0.1 -0.35 -0.32 -0.95 0.32 -0.79 -1.74 -1.28 1.06 1.43 -0.86 -0.87 -0.39 -0.63 0.1 1.19
KNA49518 (VCV51_033797)
 -0.14 -1.63 -1.55 -0.88 -2.69 -2.62 -2.57 -2.84 1.01 -0.25 -0.94 0.98 -0.33 -1.32 -1.88 1.12 1.44 -2.41 -2.37 0.8 0.84 0.89 1.48
KNA49672 (VCV51_030217)
 0.57 -2.4 -0.5 0.07 -1.2 -1.09 -0.95 -1.59 -0.28 0.72 -1.66 0.58 1.12 -2.56 -2.1 1.34 1.56 -1.34 -1.13 -0.13 -0.13 0.14 0.73
KNA50228 (VCV51_030262)
 0.15 -0.5 -0.94 -0.47 -0.72 -0.73 -0.64 -0.89 -0.46 -0.05 -0.83 0.85 0.23 -0.44 -0.85 1.13 1.38 -0.76 -0.58 -0.39 0.08 -0.18 1.17
KNA50229 (MshI)
 0.08 -0.61 -1.26 -0.39 -0.3 -0.45 -0.25 -0.57 -0.44 -0.23 -0.73 0.63 0.08 -0.61 -0.74 1.28 1.52 -0.61 -0.37 -0.4 -0.18 -0.25 0.84
KNA50230 (MshJ)
 0.37 -0.56 -0.59 0.05 -0.71 -0.56 -0.46 -0.81 -0.41 -0.26 -0.69 0.69 -0.08 -0.4 -0.3 1.05 1.29 -0.62 -0.44 -0.3 0.0 -0.21 0.86
KNA50231 (MshK)
 0.54 -0.58 -0.77 0.4 -1.52 -1.47 -1.29 -1.65 -0.58 -0.25 -0.72 0.88 -0.01 -0.68 -1.26 1.45 1.69 -0.15 -0.16 -0.6 -0.44 -0.45 0.74
KNA50232 (MshL)
 0.5 -0.55 -1.07 0.26 -0.79 -0.71 -0.53 -0.91 0.14 -0.03 -0.57 0.41 0.19 -0.51 -1.03 0.83 1.12 -0.6 -0.56 0.25 0.39 0.25 0.51
KNA50233 (MshM)
 0.55 -1.08 -1.26 0.32 -1.4 -1.27 -1.06 -1.42 0.06 -0.5 -1.29 0.59 -0.47 -1.1 -0.79 1.17 1.54 -0.59 -0.74 0.35 0.38 0.26 1.08
KNA50234 (MshN)
 0.3 -1.05 -1.05 0.1 -0.76 -0.7 -0.61 -0.87 0.39 -0.39 -0.85 0.44 -0.38 -0.94 -0.51 0.98 1.19 -0.02 -0.18 0.3 0.45 0.37 0.42
KNA50235 (VCV51_030269)
 0.34 -0.67 -0.84 0.07 -1.13 -0.99 -0.77 -1.26 0.5 -0.08 -0.61 0.52 -0.06 -0.71 -0.87 0.39 0.65 0.38 0.4 0.33 0.29 0.56 0.6
KNA50236 (MshG)
 0.53 -0.96 -0.33 0.36 -0.98 -0.97 -0.9 -1.2 0.42 -0.58 -1.17 0.16 -0.47 -1.01 -0.93 0.97 1.26 -0.23 -0.24 0.53 0.42 0.47 0.54
KNA50237 (MshF)
 0.79 -1.48 -0.28 0.68 -1.19 -1.2 -1.09 -1.3 0.09 -0.09 -1.36 -0.05 -0.16 -1.53 -1.37 0.92 1.22 0.16 0.27 0.16 -0.04 0.07 1.05
KNA50238 (VCV51_030272)
 0.35 -0.91 -1.02 0.19 -1.26 -1.06 -0.87 -1.44 0.61 -0.1 -0.8 -0.31 -0.33 -0.74 -1.72 0.72 0.89 0.21 -0.03 0.56 0.2 0.55 1.31
KNA50240 (VCV51_033688)
 0.37 -1.81 -0.14 0.16 -0.66 -0.61 -0.57 -0.77 0.36 -0.38 -0.51 -0.2 -0.61 -1.97 -2.1 0.56 0.98 0.41 0.24 0.32 -0.01 0.36 1.38
KNA50241 (VCV51_033689)
 0.37 -1.13 -0.77 0.25 -1.73 -1.61 -1.44 -1.66 0.1 -1.32 -0.57 0.48 -1.25 -1.24 -1.86 1.48 1.85 -0.12 -0.21 -0.07 -0.57 0.01 1.42
KNA50242 (VCV51_030274)
 0.21 -1.34 -0.7 0.19 -1.88 -1.84 -1.71 -2.07 -0.02 -0.95 -0.37 0.05 -1.14 -1.67 -1.53 1.76 1.99 0.31 0.35 -0.14 -0.67 -0.09 0.87
KNA50244 (MshQ)
 0.73 -1.2 0.37 0.9 -1.49 -1.2 -1.08 -1.51 0.58 -0.18 -0.83 -0.54 -0.01 -1.5 -2.48 0.44 0.97 0.26 0.25 0.5 -0.13 0.32 0.76
KNA50260 (VCV51_033694)
 -0.03 -0.5 -1.52 -0.88 -0.6 -0.44 -0.5 -0.8 0.2 -0.38 -0.41 0.06 -0.4 -0.71 -0.84 1.01 1.12 0.22 0.19 0.41 0.71 0.49 0.3
KNA51812 (VCV51_030361)
 0.49 -1.76 0.31 -0.71 -0.02 -0.11 -0.03 0.03 -0.46 -0.06 -0.48 -0.38 0.62 -1.72 -3.45 0.49 0.69 -1.95 -1.37 -0.03 0.2 0.75 1.56
KNA51813 (VCV51_030362)
 0.53 -2.42 -0.01 -0.99 -0.29 -0.27 -0.22 -0.31 -0.28 0.21 -0.81 -0.36 0.85 -2.81 -3.7 1.09 1.36 -2.03 -1.48 -0.01 0.04 0.94 0.98
KNA51814 (VCV51_030363)
 0.96 -3.7 0.2 -0.27 -0.44 -0.62 -0.4 -0.6 -0.49 0.37 -1.19 -0.08 1.01 -4.12 -4.27 1.02 1.27 -2.04 -1.69 -0.38 -0.4 0.5 1.46
KNA51816 (VCV51_030365)
 -0.92 -0.09 -1.65 -1.29 -1.17 -1.35 -1.09 -1.35 -1.17 -0.21 -0.58 -0.01 0.07 0.18 -3.06 1.59 1.89 1.14 0.96 -1.4 -1.22 -1.23 0.8
KNA51826 (DegS)
 0.87 -1.2 -0.25 0.39 -0.89 -1.02 -1.06 -1.04 -0.05 -1.2 -1.34 0.3 -0.77 -1.3 -3.41 1.22 1.38 0.39 0.41 -0.0 -0.1 -0.04 0.99
KNA51828 (VCV51_033516)
 0.18 -0.88 -1.86 -0.71 -0.45 -0.26 -0.24 -0.62 0.62 -0.6 -0.52 -0.04 -0.0 -1.13 -0.73 1.04 1.17 -0.44 -0.44 0.56 0.49 0.72 0.18
KNA51838 (VCV51_033525)
 -0.87 -0.28 -2.76 -1.97 -1.25 -1.3 -1.18 -1.25 -1.23 -1.34 -0.88 -0.48 -0.52 -0.39 -2.08 1.72 2.19 1.49 1.26 -1.0 -0.95 -0.78 0.14
KNA51874 (VCV51_030404)
 0.57 -0.62 -0.69 -0.64 -1.66 -1.42 -1.3 -1.8 0.02 -0.34 -0.56 0.58 0.23 -0.77 -1.17 1.64 1.65 -1.96 -1.71 0.12 -0.43 0.84 0.68
KNA51879 (VCV51_030409)
 -0.24 -2.37 -1.13 -0.72 0.07 -0.0 -0.02 -0.03 -0.35 -0.29 -1.21 0.31 -0.17 -2.41 -1.79 1.31 1.74 0.26 0.2 -0.09 -0.5 -0.18 0.64
KNA51880 (VCV51_030410)
 0.15 -2.49 -0.56 -0.29 0.09 -0.12 -0.08 -0.1 -0.22 -0.47 -1.45 0.22 -0.36 -2.45 -2.45 1.24 1.56 0.48 0.26 -0.01 -0.28 -0.08 0.51
KNA52420 (VCV51_033416)
 0.44 -1.76 -0.09 -0.19 -1.87 -1.76 -1.74 -1.88 -0.16 0.3 -0.85 0.25 0.12 -1.94 -1.42 1.43 1.8 0.11 0.17 -0.04 -0.5 0.0 0.79
KNA52487 (VCV51_033399)
 -0.55 -0.31 -1.41 -1.15 -0.64 -0.47 -0.41 -0.75 -0.53 0.57 -0.36 0.62 0.95 -0.25 -0.21 0.9 1.22 -1.33 -1.06 -0.32 -0.67 -0.47 1.39
KNA52489 (VCV51_033400)
 -0.06 -0.08 -1.16 -0.78 -1.8 -1.76 -1.54 -2.2 -0.2 0.48 0.42 -0.37 1.24 -0.56 -1.83 1.1 1.33 -1.84 -0.98 0.03 -0.78 -0.33 1.76
KNA52490 (RadC)
 -0.46 -0.71 -1.72 -1.33 -2.13 -1.99 -1.82 -2.04 -0.48 0.01 -0.17 -0.14 0.23 -1.1 -2.08 2.23 2.42 -1.93 -1.54 0.06 -1.04 0.02 0.47
KNA53375 (VCV51_033334)
 -0.24 -0.65 -1.1 -0.69 -0.38 -0.44 -0.25 -0.52 0.01 -0.65 -0.78 -0.14 -0.34 -0.69 -0.4 0.77 1.19 0.94 1.11 -0.15 -0.48 -0.3 0.67
KNA53571 (VCV51_030052)
 0.44 -2.82 0.53 0.42 -2.87 -3.08 -3.15 -2.83 -0.17 0.21 -2.51 -0.91 0.51 -2.66 -3.28 2.06 2.53 -3.32 -3.2 0.05 -0.62 -0.22 0.12
KNA53575 (VCV51_030054)
 -0.25 -0.41 -0.19 0.02 -0.94 -0.9 -0.84 -0.96 -0.38 -0.53 -0.33 0.84 -0.41 -0.52 1.1 0.41 0.78 0.52 0.63 -0.54 -0.89 -0.34 0.76
KNA53595 (VCV51_030073)
 -0.23 -1.18 -0.82 -0.75 -0.6 -0.71 -0.61 -0.89 -0.69 -0.12 -0.78 0.4 0.21 -1.1 -0.61 1.6 1.85 -0.58 -0.48 -0.61 -0.56 -0.43 1.18
KNA53596 (VCV51_033293)
 -0.37 -0.29 -1.39 -1.02 -1.1 -1.08 -0.94 -1.25 -0.34 -0.15 -0.32 0.15 0.35 -0.44 0.06 1.12 1.4 0.12 0.2 -0.13 -0.1 -0.08 1.11
KNA53599 (VCV51_033294)
 -0.2 -1.66 -0.91 -0.49 -0.44 -0.45 -0.44 -0.48 -0.39 -0.2 -0.31 0.47 -0.29 -1.69 0.23 0.84 1.11 0.77 0.84 -0.43 -0.54 -0.22 0.84
KNA53605 (YsxC)
 0.22 -0.76 -0.98 -0.01 -0.19 -0.26 -0.32 -0.22 0.03 -0.7 -0.33 -0.05 -0.71 -0.79 -0.05 1.13 1.41 -0.6 -0.44 -0.02 -0.33 -0.27 0.97
KNA53606 (VCV51_030078)
 0.59 -2.03 0.43 -0.56 -0.69 -0.43 -0.55 -0.77 0.19 0.07 -1.03 0.65 0.71 -2.45 -0.5 0.91 1.04 -2.01 -2.17 0.33 0.42 0.54 0.45
KNA53611 (VCV51_030082)
 0.33 -1.71 -0.4 -0.29 -1.41 -1.27 -1.26 -1.56 -0.13 0.34 -0.47 0.5 0.42 -1.97 -0.91 1.61 1.85 -1.02 -0.76 -0.22 -0.53 0.05 0.63
KNA53613 (HemD)
 1.04 -0.93 0.07 0.44 -1.23 -1.16 -1.24 -1.49 -0.1 0.26 -1.14 0.36 0.28 -1.08 -0.14 0.7 1.19 -1.72 -1.49 0.24 -0.04 0.43 0.86
KNA53622 (VCV51_030093)
 -0.6 -0.8 -1.87 -1.47 -0.72 -0.43 -0.23 -1.03 -0.79 0.29 -0.98 0.75 0.78 -1.12 -0.43 1.61 1.67 -0.09 0.17 -0.75 -1.49 -0.59 0.69
KNA53623 (VCV51_033302)
 -0.1 -2.01 -1.43 -1.26 -1.5 -1.24 -1.13 -1.64 -1.48 -0.32 -0.99 0.42 -0.05 -2.04 -0.69 1.68 1.88 1.29 1.15 -1.16 -1.12 -0.64 0.64
KNA53628 (VCV51_030098)
 -0.18 -0.86 -2.04 -1.31 -0.63 -0.65 -0.57 -0.78 -0.4 0.11 0.1 0.43 0.92 -1.03 -0.69 1.62 1.86 -1.15 -0.92 -0.29 -0.87 -0.08 0.15
KNA53634 (VCV51_033308)
 -0.12 -0.28 -1.51 -0.65 -1.02 -0.87 -0.82 -1.02 0.4 -0.48 -0.85 -0.94 -0.18 -0.09 -1.12 1.29 1.75 -0.27 -0.03 0.67 0.42 0.55 -0.37
KNA53725 (CcoG)
 -0.49 -2.43 -1.47 -0.66 -2.44 -1.86 -1.89 -2.59 -0.76 1.09 -1.14 0.25 1.41 -2.83 -2.98 2.02 2.34 -2.58 -2.07 -0.65 -1.56 -0.9 0.89
KNA53748 (RecF)
 0.04 -0.18 -0.05 -0.67 -0.72 -0.64 -0.57 -0.78 0.01 -0.36 -0.35 0.29 -0.27 -0.25 0.53 0.83 1.05 -0.94 -0.77 0.16 0.25 0.15 0.77
KNA56839 (VCV51_030478)
 0.17 -1.42 -1.15 -0.2 -1.45 -1.13 -1.21 -1.61 -0.25 0.21 -0.69 0.23 0.35 -1.61 -1.25 1.5 1.98 -1.03 -0.76 -0.16 -0.51 -0.08 1.26
KNA56841 (VCV51_030480)
 0.33 -1.14 -0.75 -0.06 -0.78 -0.79 -0.79 -0.91 0.26 -0.53 -1.41 0.17 -0.63 -1.2 -0.6 0.92 1.08 0.46 0.53 0.29 0.22 0.5 0.78
KNA56842 (VCV51_030481)
 0.16 -0.29 -1.16 -0.14 -0.96 -1.07 -1.01 -1.13 0.21 -0.91 -1.21 0.28 -0.96 -0.35 -1.13 1.15 1.4 0.15 0.18 0.47 0.23 0.52 0.65
KNA56843 (VCV51_030482)
 -0.41 -0.26 -1.32 -0.82 -0.56 -0.38 -0.36 -0.49 -0.09 -0.09 -0.5 0.09 -0.17 -0.45 0.05 0.88 1.04 0.74 0.83 0.1 -0.17 0.17 -0.37
KNA56844 (PhoU)
 -0.14 -2.11 -1.37 -0.51 -0.34 0.25 0.03 -0.25 -0.4 0.87 -1.18 -0.19 0.56 -2.18 -1.54 1.39 1.61 -0.45 -0.27 -0.21 -0.15 -0.05 0.03
KNA56878 (VCV51_030512)
 -0.7 -0.62 -1.2 -1.15 -1.06 -1.08 -0.96 -1.06 -0.25 -0.58 -0.39 1.05 -0.42 -0.71 0.67 0.79 1.24 0.66 0.82 -0.43 -0.75 -0.22 0.97
KNA56893 (VCV51_030528)
 -0.26 -0.77 -1.2 -1.22 -0.15 -0.11 -0.07 -0.37 0.29 -0.07 -0.29 0.32 -0.33 -0.76 -0.39 0.98 1.06 -0.64 -0.59 0.1 0.08 0.43 0.96
KNA56921 (VCV51_032872)
 -0.45 -0.36 -2.19 -1.21 -0.71 -0.53 -0.56 -0.68 0.61 -0.76 -0.35 0.0 -0.53 -0.44 -0.85 1.25 1.51 0.2 0.1 0.65 0.31 0.51 -0.6
KNA56922 (VCV51_030549)
 0.03 -0.55 -2.17 -0.3 -0.39 -0.12 -0.05 -0.39 0.35 0.03 -0.25 -0.38 -0.03 -0.53 -1.11 0.96 1.15 -0.04 -0.04 0.36 0.14 0.33 0.05
KNA57444 (VCV51_032839)
 0.11 -0.18 -0.56 -0.61 -0.5 -0.55 -0.57 -0.66 0.03 0.01 -0.47 0.31 0.15 -0.35 -0.54 0.82 1.04 0.08 0.19 0.05 0.06 0.08 0.34
KNA57445 (VCV51_030442)
 0.04 -1.04 -0.99 -0.6 -1.3 -1.15 -1.15 -1.35 0.12 0.06 -0.71 0.56 0.24 -1.25 -0.44 1.26 1.5 -0.05 0.14 0.19 0.02 0.25 0.51
KNA57462 (VCV51_032848)
 -0.05 -0.94 -1.19 -0.56 -1.37 -0.99 -0.88 -1.6 -0.36 0.33 -0.46 0.43 0.53 -1.15 -1.03 1.18 1.44 0.1 0.34 -0.12 -0.23 -0.21 1.12
KNA57466 (VCV51_030452)
 0.06 -0.44 -0.84 -0.68 -0.28 -0.29 -0.23 -0.52 0.12 -0.14 -0.65 -0.05 0.31 -0.81 0.37 1.24 1.49 -2.42 -2.11 0.28 -0.15 0.48 0.06
KNA57479 (VCV51_030462)
 0.3 0.18 -0.38 -0.24 -1.55 -1.86 -1.75 -1.66 0.04 -0.78 -0.48 0.67 -0.82 0.0 0.46 0.91 1.12 0.24 0.55 -0.28 -0.35 0.07 0.66
KNA57480 (VCV51_030463)
 0.25 0.0 -0.4 -0.26 -1.59 -1.74 -1.66 -1.78 -0.25 -0.5 -0.9 0.92 -0.78 -0.15 0.5 1.18 1.21 0.11 0.42 -0.38 -0.62 -0.15 0.84
KNA57725 (NlpI)
 0.13 -0.67 -1.01 -0.39 -1.25 -1.31 -1.3 -1.25 0.27 -1.0 0.2 0.16 -0.83 -0.7 -0.72 1.39 1.56 -0.27 -0.16 0.37 0.18 0.38 0.69

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.