Heatmap: Cluster_30 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA46306 (VCV51_033910)
0.66 -2.87 0.08 0.42 -1.34 -0.61 -1.18 -1.9 -0.62 0.33 -1.59 1.44 -0.76 -3.42 -2.3 -1.69 -0.95 -1.09 -0.99 -0.61 -1.12 -0.79 2.96
KNA49098 (VCV51_030248)
-0.37 -2.07 0.19 -0.94 -0.67 -1.07 -0.59 -1.3 -2.33 0.13 -0.45 -2.62 0.29 -1.57 0.07 -1.9 -1.23 1.68 1.65 -2.83 -2.2 -2.09 2.52
KNA49924 (VCV51_033752)
-0.9 -4.49 1.15 -1.13 -1.62 -1.43 -1.54 -2.42 -1.41 -0.5 -3.19 0.71 -1.12 -4.31 0.83 -3.01 -2.08 -2.08 -1.94 -1.39 -2.19 -1.3 3.53
KNA49928 (VCV51_033756)
-1.5 -2.69 0.25 -2.18 -2.78 -2.57 -2.82 -3.31 0.67 -3.72 -4.19 -0.25 -3.99 -2.51 -1.59 -3.83 -3.17 -1.44 -1.72 0.25 -0.4 0.29 3.74
KNA50243 (MshP)
-6.54 -4.86 2.1 -7.2 -5.04 -5.71 -6.73 -4.58 -3.73 -5.14 -7.32 0.92 -6.98 -5.11 -0.94 -5.55 -6.01 -5.82 -4.79 -4.55 -5.32 -4.58 3.98
KNA51542 (VCV51_033583)
0.04 -0.19 -0.14 -0.76 -1.82 -0.88 -0.91 -2.46 0.12 -0.69 -1.7 -0.16 -0.69 -0.22 -1.32 -0.2 0.27 0.05 1.04 -0.06 -0.35 0.04 2.42
KNA52278 (VCV51_033444)
-0.84 -3.77 -1.02 -0.91 -1.8 -1.75 -1.79 -2.3 -0.11 -0.13 -2.88 0.85 -0.39 -3.81 -3.6 -0.33 0.07 -2.01 -1.82 0.32 1.81 -0.06 2.9
KNA52466 (VCV51_033396)
0.54 0.16 -0.5 -0.02 -1.33 -1.32 -1.3 -1.6 -0.42 -0.28 -0.33 -0.32 -0.16 -0.14 -1.64 0.81 1.09 -0.35 -0.04 -0.7 0.3 -0.41 1.87
KNA52751 (VCV51_031532)
-1.13 -0.66 -1.23 -1.09 -0.58 -1.28 -0.79 -0.76 -0.54 -2.41 -2.3 -1.39 -2.81 -1.78 -2.65 -1.23 -1.28 0.46 0.55 -0.82 -0.87 -0.03 3.45
KNA53376 (VCV51_033335)
0.37 -2.39 0.36 0.15 -0.6 -0.57 -0.59 -0.85 -0.98 0.55 -1.48 0.51 0.92 -2.17 -1.96 -0.11 0.3 -2.18 -2.02 -0.94 -1.31 -0.97 2.68
KNA53577 (VCV51_030056)
-0.3 -1.76 -1.39 -0.29 -1.14 -1.2 -1.12 -1.05 -0.1 -1.33 -1.11 -0.52 -2.07 -1.73 -2.3 -0.16 0.38 -2.48 -2.1 -0.12 -0.27 -0.43 3.4
KNA53750 (VCV51_033272)
0.01 -3.51 -1.99 -0.05 1.06 1.3 1.05 1.04 -0.0 -0.84 -2.74 -2.03 -1.7 -3.13 -3.01 -1.22 -1.15 0.93 1.29 0.17 -0.53 -0.06 0.57
KNA53894 (VCV51_030823)
-0.39 -1.92 -2.31 -1.08 0.43 0.23 0.53 0.49 -0.68 -0.69 -0.78 -0.4 -0.85 -2.34 -2.36 -0.35 -0.69 0.87 1.25 -0.57 -0.66 -0.22 2.2
KNA53895 (VCV51_030824)
-0.69 -1.25 -3.31 -1.79 0.12 -0.1 0.22 0.17 -0.8 -0.87 -0.53 -0.63 -0.88 -1.73 -2.76 -0.6 -1.09 1.53 1.88 -0.68 -0.74 -0.2 2.0
KNA53896 (VCV51_030825)
-0.85 -1.6 -2.81 -1.89 1.04 0.83 1.1 1.11 -0.87 -1.01 -1.35 -1.2 -1.3 -2.07 -1.58 -0.45 -0.94 0.93 1.13 -0.93 -0.59 -0.41 1.78
KNA53897 (VCV51_033249)
-0.56 -1.86 -2.19 -1.41 0.65 0.5 0.79 0.63 -0.76 -1.28 -1.57 -1.49 -1.57 -2.43 -2.63 -0.37 -0.8 1.36 1.55 -0.59 -0.31 -0.14 1.85
KNA53898 (VCV51_033250)
-2.01 -2.18 -3.19 -2.5 -0.1 -0.29 -0.03 -0.08 -2.89 -1.69 -3.23 -2.36 -2.41 -3.19 -2.96 -1.31 -1.5 2.3 2.74 -3.07 -3.17 -2.83 2.22
KNA53899 (VCV51_030827)
-2.7 -2.28 -4.12 -3.35 0.28 0.14 0.36 0.31 -2.41 -2.69 -3.64 -2.5 -3.12 -3.39 -3.7 -1.92 -2.49 1.82 2.65 -2.66 -2.98 -2.31 2.59
KNA54879 (VCV51_031811)
-1.15 -1.65 -2.01 -1.53 -1.39 -1.18 -1.16 -1.52 -1.15 -0.68 -1.29 -0.14 -0.68 -1.88 -0.92 -0.95 -0.47 -0.55 -0.47 -1.19 -0.47 -0.98 3.57
KNA54945 (VCV51_031762)
-0.01 -0.54 -0.65 -0.2 0.08 -0.06 0.1 -0.08 -0.06 0.35 -0.07 -0.07 -0.12 -0.55 -0.26 -0.66 -0.36 0.61 0.69 -0.36 0.44 0.08 0.55
KNA55111 (VCV51_031830)
0.18 -1.11 -1.06 0.36 -0.77 -0.59 -0.52 -0.81 0.31 0.35 -0.2 0.46 -0.38 -1.35 -1.22 -0.12 0.22 1.12 1.1 0.07 -0.21 0.24 0.33
KNA55260 (VCV51_033073)
-0.21 -0.25 -0.8 -0.81 -2.69 -2.17 -2.18 -2.81 0.02 -0.32 -1.53 -0.52 1.17 -1.11 -0.78 1.2 0.69 0.8 0.73 -0.04 0.16 0.02 1.51
KNA55261 (VCV51_033074)
-0.1 -0.14 -0.57 -0.79 -2.89 -2.37 -2.45 -2.85 -0.14 -1.13 -1.7 -0.79 0.73 -0.83 -0.81 1.32 0.84 0.54 0.34 -0.38 -0.21 -0.28 2.25
KNA56906 (VCV51_030538)
-5.0 2.56 -1.23 -5.29 -4.68 -4.25 -4.3 -4.76 -4.26 -1.83 -5.68 -0.94 -1.9 2.35 -5.87 -3.03 -1.5 -4.95 -4.95 -4.79 -4.52 -4.36 3.25
KNA58240 (VCV51_032749)
0.96 -3.43 -0.81 1.31 -2.22 -1.9 -2.0 -2.95 0.79 -1.42 0.14 -0.07 -1.81 -3.11 -2.76 -0.29 -0.24 1.64 1.64 0.22 -0.07 0.32 0.1
KNA59326 (VCV51_031349)
0.29 -2.12 -0.23 -0.53 -2.87 -2.62 -2.23 -3.17 1.08 -1.01 -1.78 0.12 -0.38 -2.51 -4.51 -0.11 -0.14 -0.45 -0.37 1.07 0.51 1.04 2.46
KNA59806 (VCV51_032496)
0.63 -0.32 -0.62 0.85 -1.85 -1.9 -1.85 -1.75 0.38 -0.22 0.46 0.27 -0.68 -0.28 -0.54 -1.21 -0.49 1.21 1.08 0.18 -0.23 0.68 0.08
KNA59807 (VCV51_030866)
-0.08 0.62 -1.24 0.07 -0.92 -0.9 -0.96 -0.91 0.58 -0.19 0.05 0.31 -0.13 0.65 -0.59 -1.2 -0.26 0.89 0.89 0.1 -0.3 0.17 0.23
KNA59808 (VCV51_030867)
0.18 0.39 -0.94 0.34 -1.28 -1.16 -1.2 -1.23 0.45 -0.59 -0.65 0.17 -0.63 0.27 -0.86 -0.54 0.37 1.09 1.13 0.26 -0.01 0.19 0.28
KNA59852 (VCV51_032263)
-0.28 -1.29 -2.45 -0.62 -0.15 -0.11 0.26 -0.12 -0.41 -1.3 -0.91 0.81 -1.3 -1.4 -0.89 -1.46 -1.03 -1.12 -0.73 -0.48 -0.54 -0.49 3.04
KNA59882 (GlgX)
-0.33 -1.54 -1.91 -0.56 -1.37 -0.88 -1.12 -1.86 0.04 -0.02 -1.32 0.31 -0.12 -1.78 -1.83 -0.4 0.39 1.38 1.39 -0.16 -0.1 -0.04 2.0
KNA59883 (VCV51_032294)
-3.18 -2.46 -6.39 -3.85 -2.33 -1.75 -1.7 -4.34 -3.11 -5.22 0.43 -3.73 -0.25 -2.81 -7.99 -4.72 -4.73 -4.02 -3.0 -3.42 -4.41 -4.7 4.23
KNA59884 (VCV51_032295)
-0.54 -2.03 -1.86 -1.45 -1.02 -0.82 -0.78 -1.5 -0.63 -0.25 -0.35 -0.64 0.25 -2.47 -2.1 -0.69 -0.19 -2.33 -1.92 -0.39 0.95 -0.31 3.24
KNA59885 (VCV51_032296)
0.43 -0.1 -0.55 -0.71 -0.81 -1.01 -0.85 -1.06 0.14 -1.14 -0.87 0.13 -0.86 -0.2 -0.71 -0.61 -0.16 -0.12 -0.03 0.03 1.19 0.66 1.92
KNA59904 (VCV51_032315)
0.67 -1.36 0.19 -0.05 -1.39 -1.59 -1.55 -1.65 -0.06 -0.6 -1.28 -0.69 -0.1 -1.36 -0.54 -0.24 0.45 1.22 1.26 -0.06 -0.14 -0.13 1.65
KNA59905 (AzlC)
0.32 -1.41 -0.12 -0.01 -1.49 -1.67 -1.54 -1.83 -0.02 -0.29 -1.83 0.52 -0.59 -1.31 -1.95 -0.03 0.7 0.5 0.64 0.02 -0.08 0.14 2.23
KNA59906 (VCV51_032317)
-0.01 -1.65 -0.75 -0.45 -1.06 -1.05 -1.16 -1.27 0.07 0.08 -2.33 0.01 -0.03 -1.5 -1.81 -0.89 -0.05 1.44 1.6 -0.18 -0.37 0.0 1.89
KNA59944 (VCV51_032356)
0.25 -1.29 -1.03 -0.33 -0.53 -0.54 -0.68 -0.66 0.19 -0.69 -1.9 -0.41 -0.73 -1.47 -1.42 -0.06 0.45 0.74 0.77 0.44 0.1 0.21 2.02
KNA59952 (VCV51_032364)
-1.41 -3.46 -3.62 -2.14 -1.66 -1.38 -1.39 -2.67 -2.81 -0.75 -1.8 -1.52 0.16 -3.68 0.16 -2.97 -2.47 0.5 0.69 -2.83 -3.54 -3.18 3.77
KNA59953 (VCV51_032365)
-2.2 -3.58 -3.38 -3.05 -2.52 -2.11 -2.02 -3.51 -2.29 -2.15 -0.35 -2.51 0.48 -4.0 -3.82 -2.94 -2.5 -2.48 -1.56 -2.48 -2.61 -2.53 4.13
KNA59954 (VCV51_032366)
-0.94 -1.45 -3.19 -1.59 -1.14 -0.96 -0.81 -2.1 -1.4 -1.59 0.12 -1.17 0.44 -1.9 -3.24 -2.43 -1.89 -1.36 -0.82 -1.5 -1.53 -1.38 3.75
KNA59955 (VCV51_032367)
-0.64 -3.39 -2.4 -0.4 -0.03 -0.21 -0.19 -0.21 -0.96 -1.21 -0.7 -0.74 0.1 -3.57 -3.72 -1.52 -1.06 -0.23 -0.2 -0.87 -1.08 -0.55 3.33
KNA60018 (VCV51_032430)
-0.94 -2.03 -3.21 -1.47 -1.81 -1.74 -1.6 -2.47 -0.71 -1.05 -1.1 -0.87 1.08 -2.31 -2.44 -1.23 -0.63 0.7 1.03 -0.86 -1.67 -1.36 3.33
KNA60575 (VCV51_032246)
-2.61 -1.83 -1.85 -3.15 -2.51 -1.93 -1.94 -2.7 -1.55 -2.28 -3.28 -0.38 -2.51 -1.87 -1.94 -2.29 -1.8 -1.85 -1.71 -1.65 -2.01 -1.5 4.1
KNA60771 (VCV51_032033)
0.05 -0.62 -0.21 -0.05 -3.97 -3.41 -3.34 -4.3 -0.6 0.55 -0.54 0.63 0.1 -1.01 -2.03 0.58 1.1 -1.91 -0.81 -0.17 -0.21 -0.49 2.6

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.