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Gene | 0.02% arabinose,A1552 | 0.5mM indole,N16961 | 37C,C6706 | arabinose-,A1552 | E-exponential,5uM AI-2,C6706 | E-exponential,5uM CAI-1,C6706 | E-exponential,5uM DPO,C6706 | E-exponential,Water,C6706 | empty Tn | E-stationary,0.2% L-arabinose,C6706 | LB(2% NaCl),30C,N16961 | LB,C7258 | Log,0.2% L-arabinose,C6706 | Methanol,N16961 | O395 | Polymyxin,C6706 | Polymyxin,VC1639 | riboflavin-,N16961 | riboflavin+,N16961 | TnqstR | TntfoY | TntoX-strep | Water,Rich,N16961 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KNA47890 (VCV51_033872) | 19.11 | 13.87 | 5.89 | 17.76 | 28.14 | 29.35 | 31.8 | 24.06 | 19.3 | 31.06 | 12.99 | 36.34 | 22.86 | 14.11 | 9.38 | 15.78 | 21.88 | 31.62 | 32.45 | 17.34 | 15.88 | 16.97 | 34.65 |
KNA50361 (VCV51_031434) | 41.82 | 35.5 | 18.51 | 27.32 | 78.09 | 73.38 | 78.5 | 83.62 | 44.11 | 63.6 | 39.8 | 48.4 | 53.79 | 32.67 | 30.96 | 92.27 | 82.08 | 93.7 | 110.15 | 45.9 | 50.32 | 46.95 | 35.76 |
KNA51127 (RpoE) | 627.98 | 748.87 | 223.29 | 503.97 | 305.53 | 282.32 | 337.53 | 293.92 | 2289.86 | 398.74 | 990.75 | 1264.97 | 880.18 | 771.68 | 359.07 | 2776.86 | 1791.47 | 3608.57 | 3020.71 | 2155.02 | 1760.03 | 1666.32 | 881.04 |
KNA51129 (VCV51_031660) | 231.02 | 251.93 | 85.69 | 211.04 | 111.69 | 117.26 | 133.46 | 113.56 | 535.14 | 151.44 | 275.68 | 523.5 | 300.3 | 257.07 | 169.66 | 806.38 | 524.61 | 569.69 | 579.69 | 474.29 | 388.25 | 405.67 | 323.61 |
KNA51130 (VCV51_033630) | 117.9 | 94.06 | 115.15 | 110.37 | 129.89 | 129.8 | 140.88 | 131.51 | 176.16 | 145.38 | 175.52 | 440.11 | 280.92 | 107.58 | 158.1 | 1009.42 | 534.66 | 378.72 | 372.46 | 170.38 | 130.86 | 138.78 | 337.84 |
KNA51165 (VCV51_031672) | 89.83 | 25.84 | 32.55 | 61.69 | 234.74 | 240.97 | 263.08 | 228.94 | 94.69 | 139.22 | 78.72 | 110.96 | 167.71 | 22.2 | 24.27 | 152.74 | 83.6 | 173.64 | 165.84 | 77.28 | 76.16 | 102.63 | 74.68 |
KNA53013 (VCV51_033367) | 35.9 | 26.24 | 13.37 | 30.7 | 53.78 | 53.86 | 60.17 | 54.02 | 44.3 | 49.31 | 30.77 | 57.62 | 39.27 | 25.85 | 22.4 | 51.37 | 48.28 | 65.35 | 69.55 | 37.09 | 28.53 | 28.35 | 55.11 |
KNA53582 (VCV51_030059) | 21.55 | 14.21 | 12.99 | 19.52 | 34.62 | 38.7 | 39.49 | 29.88 | 27.83 | 31.24 | 25.05 | 31.26 | 31.49 | 16.67 | 14.36 | 28.04 | 33.34 | 32.47 | 37.02 | 23.66 | 20.64 | 24.53 | 30.92 |
KNA53931 (VCV51_030854) | 21.0 | 5.85 | 5.6 | 15.76 | 9.92 | 8.85 | 8.47 | 8.82 | 30.5 | 8.56 | 5.85 | 11.05 | 12.0 | 5.83 | 3.1 | 36.03 | 38.0 | 29.63 | 28.15 | 24.44 | 26.52 | 28.06 | 19.16 |
KNA54634 (VCV51_033210) | 43.37 | 90.95 | 19.16 | 31.75 | 77.07 | 85.72 | 81.54 | 84.73 | 134.04 | 52.95 | 77.03 | 76.91 | 64.37 | 112.0 | 39.17 | 122.5 | 108.9 | 186.94 | 169.55 | 90.94 | 89.87 | 90.53 | 70.6 |
KNA54654 (VCV51_033222) | 46.88 | 52.59 | 30.61 | 34.34 | 26.12 | 19.75 | 22.77 | 19.38 | 112.79 | 25.57 | 27.82 | 31.08 | 23.23 | 63.17 | 24.94 | 126.83 | 120.0 | 82.25 | 81.21 | 91.78 | 85.47 | 93.86 | 120.49 |
KNA54687 (VCV51_030772) | 129.85 | 16.48 | 21.12 | 65.97 | 210.48 | 210.28 | 224.7 | 177.55 | 107.43 | 64.51 | 42.01 | 70.94 | 139.67 | 17.2 | 21.86 | 191.96 | 148.94 | 180.82 | 206.44 | 99.58 | 87.59 | 107.17 | 108.92 |
KNA54688 (VCV51_030773) | 59.86 | 7.02 | 12.78 | 35.82 | 83.62 | 72.2 | 85.65 | 73.33 | 40.29 | 28.87 | 16.37 | 46.56 | 41.07 | 7.04 | 10.32 | 44.28 | 38.44 | 65.19 | 64.15 | 43.21 | 36.95 | 45.55 | 37.73 |
KNA54689 (VCV51_030774) | 64.29 | 7.96 | 13.61 | 37.7 | 96.21 | 69.68 | 90.17 | 76.98 | 64.19 | 19.89 | 20.9 | 50.64 | 33.32 | 8.58 | 14.3 | 50.89 | 38.97 | 80.48 | 82.0 | 70.22 | 59.64 | 66.92 | 33.86 |
KNA54791 (VCV51_033205) | 67.59 | 62.11 | 26.33 | 50.21 | 50.77 | 56.0 | 60.25 | 45.99 | 94.39 | 71.63 | 40.7 | 100.57 | 64.48 | 54.64 | 33.11 | 114.09 | 99.81 | 103.6 | 101.27 | 91.99 | 92.79 | 100.63 | 118.18 |
KNA55092 (VCV51_031843) | 15.49 | 18.79 | 12.23 | 11.99 | 31.82 | 32.18 | 33.22 | 27.0 | 15.2 | 29.53 | 22.95 | 46.55 | 21.96 | 23.78 | 19.16 | 11.14 | 14.7 | 19.09 | 22.31 | 16.49 | 17.87 | 17.19 | 26.25 |
KNA55220 (VCV51_033052) | 6.0 | 5.24 | 1.34 | 4.46 | 11.68 | 12.3 | 12.83 | 10.87 | 15.15 | 7.35 | 4.6 | 8.06 | 7.87 | 6.0 | 3.6 | 22.68 | 20.66 | 17.09 | 17.53 | 15.12 | 10.99 | 12.64 | 10.52 |
KNA55221 (VCV51_033053) | 19.32 | 5.94 | 7.88 | 13.91 | 18.44 | 18.2 | 17.99 | 17.09 | 21.39 | 16.99 | 15.34 | 14.08 | 16.6 | 8.05 | 7.32 | 30.92 | 30.26 | 33.47 | 36.34 | 21.63 | 19.37 | 23.61 | 12.4 |
KNA55685 (VCV51_030999) | 61.69 | 39.82 | 28.13 | 45.75 | 81.03 | 73.27 | 74.55 | 82.32 | 69.62 | 39.19 | 29.06 | 49.47 | 44.22 | 41.91 | 43.21 | 110.95 | 102.29 | 93.42 | 101.52 | 69.58 | 61.5 | 66.05 | 73.36 |
KNA55994 (VCV51_030912) | 19.61 | 8.85 | 8.04 | 7.39 | 25.4 | 25.71 | 26.44 | 27.9 | 25.27 | 14.94 | 12.26 | 27.58 | 15.33 | 7.98 | 18.84 | 24.94 | 21.22 | 24.49 | 24.97 | 24.76 | 27.22 | 34.09 | 22.88 |
KNA56001 (VCV51_030920) | 54.52 | 14.36 | 8.85 | 39.46 | 42.09 | 40.36 | 42.09 | 40.01 | 77.12 | 33.38 | 32.19 | 35.31 | 52.94 | 11.39 | 15.52 | 100.61 | 98.24 | 80.78 | 87.21 | 62.53 | 69.42 | 81.08 | 64.45 |
KNA56007 (VCV51_030924) | 9.33 | 3.62 | 6.63 | 7.08 | 29.6 | 26.17 | 25.12 | 28.83 | 9.11 | 13.3 | 8.14 | 10.78 | 15.8 | 3.75 | 1.84 | 7.29 | 6.12 | 9.37 | 10.88 | 7.47 | 8.12 | 8.64 | 29.75 |
KNA56008 (VCV51_030925) | 9.77 | 2.72 | 7.33 | 9.98 | 16.27 | 14.89 | 15.34 | 15.16 | 9.87 | 11.7 | 6.04 | 9.65 | 11.83 | 2.84 | 2.51 | 13.57 | 10.74 | 11.77 | 12.93 | 8.62 | 8.41 | 9.57 | 17.23 |
KNA56154 (VCV51_030894) | 27.55 | 19.33 | 18.57 | 19.84 | 29.43 | 32.24 | 29.67 | 27.48 | 22.3 | 23.9 | 21.57 | 34.76 | 19.68 | 19.32 | 24.77 | 59.0 | 51.46 | 51.32 | 51.75 | 23.19 | 24.13 | 22.61 | 46.01 |
KNA56155 (VCV51_032991) | 30.89 | 44.09 | 9.22 | 18.1 | 34.3 | 36.87 | 35.63 | 29.6 | 39.87 | 30.03 | 29.58 | 43.83 | 23.43 | 42.11 | 22.54 | 77.0 | 67.78 | 42.34 | 49.21 | 48.98 | 51.47 | 48.25 | 16.08 |
KNA56171 (VCV51_030907) | 51.27 | 23.35 | 62.47 | 36.63 | 48.29 | 61.2 | 59.92 | 46.7 | 74.3 | 93.01 | 37.41 | 93.89 | 142.88 | 23.69 | 32.97 | 213.87 | 188.82 | 227.8 | 241.05 | 101.15 | 77.41 | 65.99 | 86.43 |
KNA56282 (VCV51_030600) | 40.4 | 97.25 | 18.97 | 29.22 | 67.26 | 73.19 | 78.92 | 68.29 | 57.31 | 88.6 | 71.01 | 113.51 | 90.25 | 100.5 | 88.07 | 104.01 | 92.74 | 110.93 | 101.84 | 52.17 | 43.74 | 57.43 | 79.42 |
KNA56289 (VCV51_030607) | 42.8 | 42.56 | 12.22 | 21.21 | 34.12 | 38.77 | 39.13 | 33.59 | 63.87 | 48.37 | 42.0 | 120.64 | 47.13 | 42.63 | 80.93 | 76.89 | 63.41 | 66.07 | 73.67 | 57.54 | 54.57 | 76.0 | 70.64 |
KNA56411 (VCV51_032966) | 97.24 | 76.21 | 26.63 | 60.71 | 88.66 | 153.05 | 90.38 | 59.22 | 112.26 | 272.69 | 253.79 | 221.72 | 74.2 | 79.42 | 59.32 | 155.71 | 126.0 | 186.9 | 217.99 | 99.92 | 99.6 | 125.73 | 235.25 |
KNA56412 (VCV51_030683) | 61.46 | 87.01 | 11.98 | 35.89 | 68.05 | 121.38 | 70.55 | 47.02 | 91.49 | 179.0 | 241.85 | 177.24 | 60.46 | 85.3 | 58.92 | 120.06 | 95.07 | 147.08 | 167.06 | 72.9 | 71.99 | 99.62 | 215.75 |
KNA56417 (VCV51_032967) | 181.03 | 51.36 | 103.56 | 115.04 | 228.45 | 221.27 | 234.14 | 211.52 | 260.49 | 201.4 | 177.3 | 351.4 | 210.43 | 61.24 | 246.85 | 258.86 | 228.04 | 337.57 | 386.41 | 215.91 | 212.08 | 227.67 | 170.37 |
KNA56876 (VCV51_030511) | 35.16 | 23.63 | 18.33 | 27.82 | 43.03 | 42.39 | 43.02 | 38.53 | 52.36 | 28.76 | 38.95 | 20.37 | 30.78 | 23.46 | 24.35 | 51.81 | 53.51 | 42.64 | 47.47 | 55.12 | 36.59 | 46.48 | 45.59 |
KNA56925 (VCV51_032876) | 18.16 | 6.83 | 7.01 | 12.85 | 12.79 | 10.88 | 11.98 | 9.43 | 14.86 | 11.76 | 7.78 | 17.82 | 15.12 | 6.98 | 10.25 | 22.45 | 20.32 | 25.65 | 28.01 | 15.72 | 13.27 | 14.23 | 12.46 |
KNA56927 (RadC) | 7.82 | 0.83 | 2.15 | 5.76 | 1.37 | 2.12 | 2.04 | 1.37 | 10.29 | 2.79 | 1.61 | 4.68 | 1.87 | 0.97 | 2.34 | 10.59 | 7.29 | 5.5 | 5.94 | 8.18 | 8.5 | 8.27 | 8.72 |
KNA57123 (VCV51_032855) | 83.19 | 66.02 | 22.91 | 48.16 | 143.71 | 115.32 | 92.06 | 131.33 | 181.74 | 71.19 | 110.89 | 28.38 | 76.89 | 80.49 | 60.87 | 47.01 | 53.77 | 145.36 | 167.77 | 169.56 | 194.16 | 183.07 | 36.35 |
KNA57442 (VCV51_030441) | 63.29 | 44.49 | 26.62 | 49.02 | 227.27 | 227.81 | 232.01 | 257.96 | 209.45 | 68.13 | 124.04 | 82.58 | 95.97 | 43.55 | 54.76 | 129.43 | 120.01 | 242.12 | 255.03 | 162.34 | 143.31 | 162.24 | 159.59 |
KNA57476 (VCV51_030460) | 36.85 | 71.79 | 10.39 | 20.69 | 126.07 | 126.57 | 129.55 | 128.99 | 94.27 | 40.03 | 84.66 | 54.78 | 40.47 | 67.23 | 58.57 | 95.48 | 95.41 | 87.33 | 97.39 | 70.67 | 77.62 | 87.51 | 80.76 |
KNA58529 (VCV51_031169) | 34.24 | 28.17 | 10.36 | 27.3 | 4.17 | 3.94 | 4.42 | 3.86 | 109.99 | 53.34 | 26.5 | 39.75 | 8.68 | 29.05 | 6.82 | 185.56 | 141.07 | 211.19 | 212.92 | 82.96 | 67.82 | 78.32 | 47.21 |
KNA58596 (VCV51_031114) | 65.83 | 45.46 | 34.98 | 37.49 | 83.09 | 86.9 | 84.22 | 76.21 | 71.43 | 100.12 | 164.43 | 143.78 | 90.18 | 42.1 | 37.16 | 125.86 | 106.07 | 145.61 | 169.7 | 66.86 | 53.7 | 82.49 | 91.17 |
KNA59417 (DsbB) | 22.4 | 52.46 | 20.31 | 17.44 | 85.68 | 94.32 | 103.66 | 88.08 | 44.41 | 99.22 | 76.08 | 101.95 | 116.38 | 59.09 | 29.0 | 118.63 | 95.52 | 168.6 | 151.98 | 41.54 | 46.42 | 44.23 | 123.13 |
KNA59419 (FadR) | 149.62 | 192.63 | 51.09 | 108.63 | 102.4 | 117.7 | 123.4 | 104.0 | 315.39 | 101.99 | 154.64 | 177.05 | 129.1 | 188.56 | 121.27 | 357.76 | 315.29 | 233.67 | 224.83 | 290.77 | 281.89 | 290.65 | 207.03 |
KNA59647 (VCV51_031369) | 74.69 | 96.47 | 39.42 | 45.36 | 145.66 | 127.97 | 130.49 | 131.99 | 105.51 | 79.58 | 74.27 | 112.21 | 95.22 | 95.89 | 128.47 | 175.07 | 151.05 | 188.56 | 190.68 | 89.4 | 93.89 | 94.54 | 124.41 |
KNA59860 (VCV51_032271) | 21.61 | 3.42 | 20.61 | 17.6 | 57.82 | 51.11 | 51.89 | 55.64 | 16.34 | 40.87 | 8.54 | 33.02 | 31.52 | 2.99 | 6.47 | 16.0 | 23.49 | 18.77 | 20.74 | 15.11 | 13.62 | 18.09 | 18.34 |
KNA59881 (VCV51_032292) | 159.11 | 169.83 | 92.54 | 128.19 | 368.88 | 470.88 | 491.06 | 355.29 | 132.59 | 451.29 | 229.33 | 349.07 | 422.08 | 166.65 | 474.11 | 84.23 | 101.31 | 497.12 | 469.98 | 113.74 | 105.09 | 107.76 | 963.56 |
KNA59898 (VCV51_032309) | 19.93 | 20.64 | 12.9 | 23.39 | 30.61 | 47.94 | 43.86 | 45.48 | 25.82 | 34.62 | 9.19 | 31.55 | 24.28 | 19.48 | 18.28 | 13.87 | 23.92 | 23.41 | 22.52 | 24.54 | 20.32 | 22.81 | 38.7 |
KNA59946 (VCV51_032358) | 35.81 | 25.95 | 25.9 | 27.15 | 86.32 | 78.1 | 74.74 | 72.95 | 32.24 | 48.2 | 27.2 | 60.58 | 26.38 | 22.94 | 35.32 | 30.16 | 39.21 | 32.27 | 34.2 | 27.06 | 26.6 | 30.23 | 86.19 |
KNA59949 (VCV51_032361) | 7.48 | 20.27 | 3.3 | 6.17 | 34.04 | 28.1 | 29.92 | 30.27 | 16.21 | 11.04 | 4.02 | 9.48 | 15.73 | 22.04 | 4.89 | 9.63 | 13.53 | 11.96 | 12.91 | 10.44 | 9.23 | 14.22 | 23.38 |
KNA60006 (VCV51_032418) | 14.29 | 8.21 | 15.37 | 9.63 | 89.65 | 69.3 | 71.98 | 85.56 | 19.5 | 19.82 | 11.19 | 23.27 | 18.09 | 7.2 | 5.48 | 17.66 | 23.97 | 20.44 | 19.67 | 16.29 | 16.89 | 18.75 | 124.5 |
KNA60604 (VCV51_032193) | 17.95 | 4.81 | 25.92 | 14.36 | 44.89 | 39.07 | 43.95 | 41.49 | 12.87 | 25.41 | 19.1 | 17.21 | 19.09 | 4.55 | 13.5 | 3.6 | 4.99 | 11.15 | 14.32 | 14.21 | 15.46 | 18.64 | 29.14 |
KNA60769 (VCV51_032031) | 22.37 | 6.52 | 14.69 | 15.85 | 35.75 | 35.61 | 35.41 | 33.73 | 17.93 | 19.74 | 20.59 | 17.59 | 19.05 | 6.03 | 22.99 | 5.2 | 8.62 | 28.34 | 32.68 | 17.1 | 16.29 | 17.6 | 61.45 |
KNA60971 (VCV51_031946) | 10.99 | 0.53 | 3.77 | 16.18 | 8.69 | 12.85 | 10.4 | 14.12 | 8.19 | 12.62 | 0.95 | 6.83 | 4.81 | 0.45 | 1.01 | 2.92 | 5.83 | 12.55 | 11.16 | 6.47 | 5.06 | 6.68 | 8.2 |
KNA60972 (VCV51_031947) | 9.62 | 0.32 | 1.6 | 12.18 | 7.68 | 8.18 | 7.79 | 8.95 | 7.88 | 8.34 | 0.83 | 5.0 | 2.41 | 0.35 | 0.22 | 1.83 | 3.44 | 9.75 | 8.83 | 6.51 | 4.71 | 5.76 | 0.06 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)