Heatmap: Cluster_26 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA45866 (VCV51_033916)
-3.81 2.09 -6.2 -4.05 -3.66 -3.64 -3.77 -3.68 -3.42 -3.82 -4.35 3.4 -4.37 2.66 -2.14 -2.28 -2.21 -3.59 -3.64 -3.56 -3.61 -3.5 -3.29
KNA45867 (VCV51_033917)
-3.46 1.65 -5.06 -3.72 -3.22 -3.06 -3.23 -3.35 -4.15 -3.35 -4.13 3.64 -3.68 2.34 -2.13 -1.37 -1.4 -3.1 -3.52 -4.2 -4.35 -4.21 -4.27
KNA47428 (VCV51_033892)
-4.22 -1.65 0.97 - - - - -3.24 -2.93 - - 3.61 - -2.01 -0.67 -0.9 -0.27 -2.26 -1.61 -1.45 -3.71 -2.99 2.29
KNA49522 (VCV51_033798)
-0.13 1.28 -1.02 -0.81 -1.11 -1.26 -1.23 -1.12 0.63 -1.37 1.48 1.75 -2.93 0.71 0.16 0.16 0.1 -3.09 -2.86 0.06 -0.57 0.2 -0.84
KNA49523 (VCV51_030322)
-0.69 1.18 0.06 -1.61 -0.43 -0.68 -0.54 -0.62 -0.37 -0.41 1.82 1.13 -1.1 0.87 0.56 -0.06 -0.5 -1.6 -1.02 -0.51 -1.09 -0.27 -0.87
KNA50262 (VCV51_030291)
-0.13 0.99 -0.83 -0.01 -0.4 -0.54 -0.57 -0.63 0.19 -0.48 0.23 0.09 -0.84 0.95 -0.03 -0.04 0.29 -0.45 -0.26 0.28 -0.05 0.12 0.24
KNA51557 (VCV51_033600)
-0.01 -2.0 -0.82 -0.49 -8.39 -8.04 -7.21 -8.04 0.72 0.91 -1.66 2.25 0.45 -2.0 -3.16 0.49 1.19 -1.46 -0.77 0.54 0.29 0.75 0.18
KNA51567 (VCV51_033610)
0.55 -1.28 -1.34 0.11 -3.4 -3.15 -3.12 -3.58 -0.5 0.7 -2.21 0.04 0.94 -1.76 -2.28 0.91 1.48 -1.46 -1.07 -0.45 0.3 -0.12 2.28
KNA51568 (VCV51_033611)
0.37 -1.08 -1.86 -0.42 -4.16 -3.57 -3.76 -4.11 -0.55 1.35 -1.57 -0.12 1.55 -1.63 -2.43 0.55 1.24 -1.34 -0.87 -0.47 0.53 -0.01 2.04
KNA51853 (VCV51_030385)
-0.54 1.08 -1.55 -0.57 0.1 -0.1 0.19 -0.26 -1.12 0.64 -1.05 0.22 0.11 1.14 -0.32 0.37 0.55 -0.05 -0.16 -1.18 -1.37 -0.83 0.52
KNA51859 (VCV51_030391)
-1.38 1.97 -1.4 -2.05 0.74 -0.63 -0.64 0.53 -0.85 -1.01 -0.92 -1.87 0.07 2.11 -2.31 -0.63 -0.52 -1.24 -0.33 -0.78 -1.12 -0.69 1.02
KNA51860 (VCV51_033534)
-1.45 0.14 0.47 -1.95 0.88 0.06 0.09 1.08 -1.11 0.16 -0.91 -0.25 0.91 0.51 -1.81 -0.69 -0.63 -0.61 0.16 -1.23 -1.08 -1.1 1.53
KNA51917 (VCV51_033507)
-21.18 - -1.54 - -13.71 -13.3 -12.52 -10.72 - -12.61 - 3.43 - - 3.43 -11.19 -10.77 - - - - - 0.09
KNA53011 (VCV51_031563)
0.83 -1.67 -0.68 -0.82 -1.52 -1.47 -1.5 -1.71 0.54 0.58 -0.7 1.94 1.08 -1.81 -0.68 -0.58 -0.89 -0.73 -0.33 0.68 0.28 0.73 -0.26
KNA54622 (VCV51_030722)
0.72 -4.48 -4.14 0.8 -4.21 -4.92 -4.65 -5.17 1.53 -3.91 -3.39 2.89 -4.41 -4.75 -2.61 -3.09 -3.13 -3.47 -3.52 1.13 1.56 1.53 -2.23
KNA54623 (VCV51_030723)
-0.21 0.7 0.26 -0.12 -5.25 -5.17 -4.88 -5.71 -0.2 -0.81 0.2 2.02 -1.23 0.35 0.99 -0.74 -0.92 0.36 0.86 -0.2 -0.28 -0.19 0.2
KNA54661 (VCV51_030750)
-0.14 -0.32 -0.99 -0.29 -1.28 -0.81 -0.9 -1.48 -0.04 -0.16 -1.05 1.41 -0.47 -0.8 0.71 0.37 0.01 0.83 0.85 -0.19 0.48 -0.01 0.02
KNA55657 (VCV51_030972)
-0.14 -0.51 -2.09 -1.03 -0.22 -0.06 -0.39 -0.46 0.5 0.16 -0.14 1.72 0.64 -0.5 -0.33 0.59 0.11 -1.8 -1.37 0.1 0.01 0.22 0.07
KNA56317 (VCV51_030641)
-0.44 -1.39 -2.37 -0.86 -2.04 -1.73 -2.05 -2.5 0.62 -1.44 0.94 2.06 -1.3 -1.54 -3.73 1.56 1.79 -1.86 -2.05 -0.01 0.22 0.72 -0.72
KNA56899 (VCV51_032865)
-0.37 0.95 -0.07 -0.8 -2.12 -1.97 -1.98 -1.84 -0.53 -1.25 -1.48 -0.56 2.61 0.97 -1.77 0.0 0.31 -0.6 -0.92 -0.34 -0.11 -0.37 0.4
KNA56900 (VCV51_030533)
0.05 -0.16 -1.91 -0.82 -2.62 -2.53 -2.58 -2.91 -0.47 -1.3 -1.82 -1.71 2.69 -0.26 -2.61 0.52 0.7 -0.11 -0.39 -0.55 -0.87 -0.36 1.88
KNA56901 (VCV51_030534)
0.14 0.9 -2.55 -0.72 -2.74 -2.52 -2.53 -2.9 0.22 -1.28 -2.1 -1.67 2.43 1.0 -1.36 0.47 0.75 -0.94 -0.89 0.25 -0.5 0.31 0.54
KNA56902 (VCV51_030535)
-3.28 1.95 -2.52 -3.37 -3.64 -3.92 -3.59 -4.13 -3.06 -2.53 -4.56 -2.97 3.58 1.86 -2.16 -2.09 -1.54 -1.86 -1.91 -3.09 -3.0 -2.82 -0.57
KNA56903 (VCV51_030536)
-3.98 2.47 -2.73 -3.96 -3.94 -3.95 -4.03 -4.31 -3.85 -2.7 -4.46 -1.87 3.26 2.38 -5.73 -2.77 -1.82 -2.79 -2.46 -4.07 -3.97 -3.72 -0.74
KNA56904 (VCV51_032866)
-4.68 3.04 -4.29 -4.36 -4.94 -4.38 -4.77 -4.66 -3.58 -3.41 -5.03 -3.1 2.41 2.88 -4.38 -3.39 -2.61 -2.68 -2.68 -3.55 -3.29 -3.58 -0.76
KNA56905 (VCV51_030537)
-4.91 0.38 -2.14 -5.3 -5.63 -5.82 -5.59 -5.92 -5.24 -3.5 -6.53 -3.28 4.07 0.04 -7.96 -4.38 -2.77 -4.39 -4.39 -5.32 -5.19 -5.03 1.53
KNA56907 (VCV51_030539)
-6.62 2.46 -0.29 - -5.67 -4.83 -5.17 -4.83 -6.04 -1.96 -5.8 -1.2 2.86 2.04 -5.93 -2.9 -1.76 -3.41 -3.24 -5.71 -5.68 -5.6 1.9
KNA56908 (VCV51_030540)
-5.37 2.84 -1.85 -5.91 -5.4 -4.93 -5.18 -5.19 -5.24 -2.41 -5.67 -1.69 2.43 2.72 -3.46 -3.17 -1.47 -4.06 -3.74 -5.65 -5.45 -5.14 1.09
KNA56909 (VCV51_030541)
-5.22 2.23 -1.98 -5.73 -5.27 -5.17 -5.28 -5.59 -5.51 -2.53 -5.58 -1.71 3.49 1.98 -4.16 -3.3 -1.65 -3.46 -3.1 -5.31 -5.4 -5.07 0.55
KNA56910 (VCV51_030542)
-5.35 2.39 -1.44 -5.53 -5.82 -5.37 -5.81 -6.26 -5.28 -3.73 -5.92 -2.41 3.09 2.5 -3.82 -3.26 -1.92 -3.8 -3.73 -5.37 -5.2 -4.79 1.09
KNA56911 (CitG)
-4.36 1.9 -1.94 -4.67 -4.47 -4.65 -4.54 -4.9 -4.14 -2.99 -5.5 -2.23 3.59 1.82 -3.58 -2.79 -1.75 -3.0 -3.08 -4.22 -4.24 -4.02 0.86
KNA56917 (VCV51_030547)
-0.58 -0.59 -1.5 -1.37 -0.46 -0.35 -0.32 -0.44 -0.35 -0.07 -0.17 1.1 -0.31 -0.57 0.11 0.58 0.81 0.14 0.34 -0.49 1.17 -0.21 0.14
KNA56918 (VCV51_032869)
-0.48 -0.22 -1.7 -1.11 -0.17 -0.04 -0.11 -0.39 -0.79 -0.86 -0.99 2.2 -0.8 0.3 -1.08 1.29 1.33 -2.25 -2.2 -1.12 -0.4 -0.74 0.47
KNA56924 (VCV51_032874)
-1.31 -1.84 -2.84 -2.08 -1.75 -2.08 -1.71 -2.39 -1.06 -1.43 -2.74 4.04 -2.48 -0.83 -3.13 -1.39 -1.44 -2.53 -2.53 -1.17 -1.25 -1.08 -2.2
KNA56929 (VCV51_030552)
0.05 -0.08 -1.84 -0.12 -1.06 -1.17 -1.13 -0.93 0.53 -1.36 -1.6 1.91 -1.22 0.81 -1.92 0.62 0.65 0.24 0.05 0.3 -0.0 0.17 -0.18
KNA56930 (VCV51_030553)
-2.86 1.36 -5.25 -3.37 -4.03 -3.83 -3.98 -4.24 -3.11 -4.16 -4.29 3.57 -4.88 2.73 -2.65 -2.2 -1.91 -4.95 -5.25 -3.47 -2.96 -3.03 -2.76
KNA56931 (VCV51_030555)
-1.09 0.5 -2.71 -1.84 -1.3 -1.14 -1.28 -1.42 -1.26 -2.32 -1.13 3.21 -2.65 1.25 -2.01 0.55 0.8 -2.45 -2.55 -1.52 -0.82 -1.13 -0.0
KNA56932 (VCV51_030556)
-2.35 0.55 -3.37 -3.35 -0.17 -0.12 -0.19 -0.48 -3.13 -0.43 -0.67 3.26 -0.58 1.47 -1.36 -0.44 -0.27 -2.71 -2.52 -3.31 -2.58 -2.93 -0.82
KNA56936 (TcpA)
-4.19 2.06 -6.76 -4.74 -5.2 -5.66 -5.53 -5.67 -3.48 -5.62 -3.18 3.49 -5.34 2.73 -2.98 -5.98 -5.41 -4.63 -4.4 -3.72 -4.23 -3.87 -4.74
KNA56941 (VCV51_030564)
-5.36 2.58 -7.07 -5.77 -4.8 -4.67 -4.78 -5.11 -6.13 -5.24 -4.19 1.69 -5.42 3.65 -1.11 -2.73 -2.49 -4.95 -4.87 -6.83 -6.57 -6.79 -4.66
KNA56942 (VCV51_030565)
-5.87 2.66 -6.25 -6.41 -4.61 -4.45 -4.47 -4.69 -5.92 -4.9 -4.1 1.92 -5.18 3.55 -1.51 -2.76 -2.67 -4.01 -4.23 -6.38 -6.4 -6.44 -4.57
KNA56943 (VCV51_030567)
-4.34 2.31 -5.75 -4.47 -3.42 -3.26 -3.45 -3.68 -4.9 -3.97 -3.07 2.51 -4.19 3.35 -0.25 -3.52 -3.35 -4.1 -4.16 -5.0 -5.18 -4.99 -2.98
KNA56944 (VCV51_030568)
-8.43 -4.37 -3.07 -6.86 -5.43 -5.13 -5.78 -4.82 -7.38 -6.02 -6.97 4.04 -7.96 0.61 2.19 - - -8.17 -7.08 -8.4 -8.27 -7.23 -3.41
KNA56948 (AcfC)
-5.12 2.79 -5.45 -5.68 -3.66 -3.61 -3.58 -3.92 -5.76 -3.62 -3.46 2.1 -4.15 3.31 -0.69 -2.69 -2.53 -3.9 -3.99 -6.01 -5.77 -5.64 -2.62
KNA56949 (VCV51_030573)
-4.68 2.37 -5.82 -4.64 -2.95 -2.59 -2.91 -3.32 -5.18 -3.03 -3.36 2.78 -3.78 2.98 -0.4 -1.03 -0.69 -5.68 -6.13 -5.38 -5.74 -5.04 -2.54
KNA56950 (VCV51_030574)
-4.44 2.7 -5.84 -4.96 -3.18 -3.1 -3.22 -3.51 -4.32 -4.01 -3.7 2.46 -4.25 3.08 -0.2 -1.82 -1.8 -4.42 -4.28 -4.78 -4.51 -4.29 -3.14
KNA56951 (AcfA)
-3.46 1.87 -4.39 -3.66 -3.99 -3.76 -3.9 -4.18 -4.22 -3.81 -3.46 3.46 -4.23 2.65 -1.77 -1.73 -1.45 -6.43 -5.87 -4.48 -4.65 -4.38 -2.06
KNA56952 (AcfD)
-1.41 1.97 -3.36 -2.46 -1.91 -1.99 -1.91 -2.42 -0.87 -2.31 -2.21 2.35 -2.17 2.61 -1.0 -0.48 -0.07 -1.6 -1.46 -0.8 -0.62 -0.6 -1.68
KNA58524 (VCV51_031173)
-0.12 1.51 -2.11 -0.54 -0.57 -0.65 -0.68 -0.83 0.21 -0.65 -1.17 -0.01 -0.9 1.19 -0.65 0.77 0.58 -0.46 -0.32 0.25 -0.14 0.15 0.26
KNA58525 (VCV51_031172)
-0.48 1.82 -2.23 -0.58 -0.41 -0.75 -0.78 -0.88 0.55 -0.65 -0.98 0.03 -1.38 1.64 -1.23 -0.0 -0.25 -0.68 -0.69 0.36 0.01 0.46 0.14
KNA58526 (VCV51_032721)
-0.23 1.38 -1.73 -0.54 -0.77 -0.63 -0.52 -0.83 0.09 0.25 -0.59 -0.29 0.15 1.2 -0.56 -0.01 -0.04 -0.0 0.22 -0.14 -0.02 0.11 0.23
KNA58580 (VCV51_031126)
-1.26 2.06 -2.0 -1.27 -2.13 -2.29 -2.14 -2.47 -1.36 0.86 -0.68 -0.98 0.49 2.02 -1.1 0.28 -0.3 0.53 0.29 -1.36 -1.53 -1.57 0.89
KNA58612 (VCV51_032741)
0.46 -2.74 -4.67 0.54 -4.23 -4.14 -3.95 -4.08 0.36 -3.02 -1.66 3.36 -4.35 -2.67 0.28 -0.8 -1.26 -3.34 -3.63 0.29 1.16 0.64 -3.09
KNA58613 (VCV51_031098)
0.09 -0.73 -1.15 0.35 -1.23 -1.01 -1.06 -1.57 0.27 -0.44 -1.57 1.37 -0.99 -0.53 1.05 0.47 0.39 0.62 0.67 0.02 -0.85 -0.11 0.48
KNA58614 (VCV51_031097)
-0.25 -1.18 -1.28 0.05 -1.94 -1.44 -1.51 -2.02 0.22 -0.41 -1.78 1.34 -1.1 -1.15 1.6 0.62 0.59 0.9 1.12 -0.07 -0.85 -0.17 -0.15
KNA58615 (VCV51_031096)
-0.23 -0.05 -1.57 -0.07 -1.78 -1.63 -1.49 -1.86 -0.07 -0.83 -1.71 1.12 -1.33 0.08 1.44 0.82 0.78 0.93 1.01 -0.13 -0.77 -0.36 -0.31
KNA59377 (VCV51_031313)
-1.21 -1.32 -1.65 -1.11 -1.82 -1.79 -1.9 -2.33 -0.2 -1.0 -1.6 3.14 -1.57 -1.16 -2.72 -0.02 -0.21 -0.16 -0.06 -0.21 1.3 -0.28 0.02
KNA59378 (VCV51_031312)
-1.73 -1.46 -2.64 -2.47 -1.73 -1.56 -1.61 -1.78 -1.08 -0.45 0.22 2.95 -0.64 -1.42 -1.95 0.19 0.1 0.34 0.35 -1.13 1.58 -0.81 -0.75
KNA60696 (VCV51_032135)
-1.62 -2.81 -2.7 -1.98 -0.61 -0.53 -0.94 -0.63 -3.08 -2.05 -0.44 3.79 -2.68 -3.77 -1.17 -2.91 -1.86 -2.15 -2.42 -3.71 1.6 -2.95 -
KNA60714 (VCV51_032153)
0.07 -1.62 -1.88 -0.41 -1.63 -1.71 -1.58 -1.85 0.79 -1.08 -1.83 2.17 -1.3 -2.2 -0.83 -0.59 0.34 -0.36 -0.36 1.27 0.81 1.33 0.02
KNA60715 (VCV51_032154)
-0.43 -2.04 -2.18 -0.95 -1.53 -1.38 -1.36 -1.56 0.72 -0.6 -2.03 2.72 -1.17 -2.29 -1.98 -1.12 -0.65 -0.1 0.2 0.98 0.79 1.23 -0.88
KNA60716 (VCV51_032155)
0.08 -2.73 -1.97 -0.57 -0.92 -1.16 -1.12 -1.27 0.46 -0.71 -2.12 2.65 -1.12 -2.67 -2.72 -0.77 -0.09 0.11 0.29 0.77 0.56 1.11 -0.74
KNA60717 (VCV51_032156)
0.37 -3.12 -1.55 -0.62 -1.36 -1.71 -1.68 -1.68 1.35 -1.99 -3.24 1.95 -1.98 -2.97 -4.14 -1.35 -0.67 -1.06 -0.9 1.72 1.17 1.84 -0.14
KNA60747 (VCV51_032187)
0.45 0.14 -1.06 1.08 -1.28 -1.16 -1.24 -1.28 -0.37 -0.74 -2.64 -0.7 1.61 0.44 -2.13 0.04 1.06 -0.34 -0.23 -0.6 -0.84 -0.89 1.56
KNA60748 (VCV51_032188)
-2.12 1.98 -3.86 -2.47 -1.16 -1.3 -1.32 -1.21 -1.39 -2.01 -1.75 -2.01 0.92 2.64 -2.1 -0.31 0.31 -0.32 -0.48 -1.56 -1.23 -1.61 1.44
KNA60764 (VCV51_032026)
0.02 -1.88 -1.75 -0.21 -4.02 -4.57 -4.43 -4.48 0.54 0.78 -0.71 -0.45 2.01 -2.37 -3.43 0.78 1.45 -2.62 -2.42 0.5 0.38 0.71 1.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.