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Heatmap: Cluster_13 (HCCA)

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Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA44005 (VCV51_033986)
 13.38 0.0 12.37 13.01 6.56 8.35 5.1 4.22 0.36 4.83 3.32 0.0 3.14 0.0 9.3 0.0 0.0 2.8 2.17 0.23 0.26 0.14 0.41
KNA44020 (VCV51_033983)
 1.16 1.43 51.74 0.0 0.0 0.0 3.7 0.0 0.01 0.0 0.0 11.44 0.0 1.81 2.4 18.72 26.36 2.31 1.7 1.48 0.0 1.85 0.0
KNA44023 (VCV51_033982)
 70.91 21.72 8.15 40.54 0.0 0.0 0.0 0.0 3.68 0.0 0.0 0.0 8.4 25.57 0.15 0.0 0.0 10.05 12.34 3.27 1.28 5.54 0.0
KNA44054 (VCV51_033976)
 28.29 0.0 9.28 19.09 6.77 6.38 5.84 2.06 5.3 9.46 3.15 0.0 5.19 0.39 4.05 0.0 0.0 3.15 0.56 4.43 1.85 5.37 2.38
KNA44177 (VCV51_033964)
 0.0 0.0 3.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
KNA44569 (VCV51_033948)
 2.07 0.0 11.18 2.33 0.0 1.47 0.0 0.0 0.0 0.91 0.0 0.0 0.0 0.0 3.64 0.0 0.0 1.23 5.57 0.0 0.0 0.0 0.0
KNA44570 (VCV51_033949)
 617.69 3.33 215.24 554.57 116.95 225.3 156.11 86.01 47.25 315.93 54.13 44.94 273.26 6.51 0.0 18.72 26.36 59.88 71.16 44.67 31.14 41.14 70.59
KNA45506 (VCV51_033926)
 12.87 0.86 15.8 9.5 7.66 6.64 6.75 5.67 2.92 6.85 3.09 0.8 3.95 0.75 7.02 0.0 0.33 5.39 5.66 1.0 1.29 1.69 13.95
KNA46307 (VCV51_033911)
 28.29 0.0 9.28 19.09 6.77 6.38 5.84 2.06 5.3 9.46 3.15 0.0 5.19 0.39 4.05 0.0 0.0 3.15 0.56 4.43 1.85 5.37 2.38
KNA48531 (VCV51_030201)
 2440.54 1258.49 6589.73 980.9 4790.46 3791.19 4133.69 3441.34 676.22 5086.26 2423.49 2385.78 6743.46 1063.94 1309.91 1846.44 1841.96 531.32 580.14 807.93 1910.4 1495.82 7154.89
KNA48718 (VCV51_030193)
 27.17 13.78 89.12 19.64 19.8 18.45 18.45 16.62 20.65 22.09 17.53 32.28 21.32 13.84 33.72 33.52 35.18 32.71 37.95 21.02 15.62 27.23 33.66
KNA49912 (VCV51_033758)
 227.52 0.0 68.93 209.34 158.07 176.22 150.96 114.47 0.0 206.28 57.58 0.0 176.27 0.0 36.54 0.0 0.0 61.63 55.8 0.0 0.0 0.0 0.0
KNA49919 (VCV51_033745)
 12.87 0.86 15.8 9.5 7.66 6.64 6.75 5.67 2.92 6.85 3.09 0.8 3.95 0.75 7.02 0.0 0.33 5.39 5.66 1.0 1.29 1.69 13.95
KNA49929 (VCV51_033757)
 227.52 0.0 68.93 209.34 158.07 176.22 150.96 114.47 0.0 206.28 57.58 0.0 176.27 0.0 36.54 0.0 0.0 61.63 55.8 0.0 0.0 0.0 0.0
KNA50124 (VCV51_033742)
 31.52 0.0 256.84 31.59 10.85 11.89 11.42 6.66 27.25 14.37 8.65 0.0 6.24 1.99 250.04 3.7 12.65 7.33 2.74 26.53 13.38 31.28 309.13
KNA50145 (VCV51_033732)
 1696.61 71.28 781.22 1477.74 621.82 709.4 534.19 413.04 485.44 1473.8 313.88 0.0 1378.81 74.13 218.9 0.0 0.0 418.93 372.91 422.38 273.57 478.75 77.07
KNA50149 (VCV51_033736)
 13.38 0.0 12.37 13.01 6.56 8.35 5.1 4.22 0.36 4.83 3.32 0.0 3.14 0.0 9.3 0.0 0.0 2.8 2.17 0.23 0.26 0.14 0.41
KNA50159 (VCV51_033721)
 13.38 0.0 12.37 13.01 6.56 8.35 5.1 4.22 0.36 4.83 3.32 0.0 3.14 0.0 9.3 0.0 0.0 2.8 2.17 0.23 0.26 0.14 0.41
KNA50182 (VCV51_033718)
 13.38 0.0 12.37 13.01 6.56 8.35 5.1 4.22 0.36 4.83 3.32 0.0 3.14 0.0 9.3 0.0 0.0 2.8 2.17 0.23 0.26 0.14 0.41
KNA50190 (VCV51_033709)
 28.29 0.0 9.28 19.09 6.77 6.38 5.84 2.06 5.3 9.46 3.15 0.0 5.19 0.39 4.05 0.0 0.0 3.15 0.56 4.43 1.85 5.37 2.38
KNA51123 (VCV51_031664)
 2521.36 240.25 6516.52 2912.03 178.46 235.7 226.16 155.88 1421.86 3308.18 386.08 888.65 2259.72 191.68 197.7 3731.11 3068.17 408.91 337.76 1664.78 2116.67 1396.25 1137.5
KNA51520 (VCV51_033559)
 8.01 0.0 207.03 12.82 10.18 8.28 8.65 13.27 7.67 7.0 1.14 0.0 8.1 1.27 33.36 0.0 0.0 8.02 7.91 2.79 3.76 5.45 0.0
KNA51541 (VCV51_033582)
 72.01 159.98 305.99 53.35 10.96 13.12 14.33 8.84 76.18 20.07 43.12 55.46 17.1 151.32 291.79 30.09 45.07 113.31 162.05 74.11 49.65 59.59 264.47
KNA51670 (VCV51_033551)
 155.04 0.0 43.13 307.46 6.84 9.26 4.9 8.81 0.0 24.13 1.42 0.0 33.32 0.0 2.16 0.0 0.0 11.82 10.32 0.0 0.0 0.0 0.0
KNA51964 (VCV51_033496)
 530.05 13.52 129.57 546.92 70.25 156.45 115.45 47.4 105.62 218.59 58.46 0.0 173.18 31.13 0.01 0.0 0.0 99.25 84.68 111.99 64.15 110.03 0.0
KNA52110 (VCV51_033479)
 286.33 8.55 91.5 214.38 46.81 96.04 70.15 33.83 98.89 132.07 50.38 0.0 101.19 15.7 62.28 0.0 0.0 37.42 36.38 95.57 56.92 97.41 5.31
KNA52112 (VCV51_033481)
 115.48 0.95 140.95 121.23 33.59 32.33 24.27 14.87 20.87 40.94 9.98 6.9 45.1 4.65 33.95 22.22 25.86 10.97 15.91 15.97 13.97 23.88 10.3
KNA53017 (VCV51_031559)
 7.91 2.07 47.82 7.91 3.25 2.7 3.03 2.52 5.62 6.55 5.34 5.42 3.89 2.3 4.28 4.54 4.14 13.41 11.9 5.43 5.33 6.15 25.09
KNA53344 (VCV51_033338)
 13.39 2.08 388.21 12.33 7.88 7.6 7.98 7.14 2.03 4.99 6.53 9.53 4.32 1.77 1.75 16.79 9.87 3.09 3.49 2.51 2.79 1.96 4.77
KNA53756 (VCV51_033273)
 447.91 27.96 754.34 393.75 54.8 50.33 53.88 50.46 148.61 157.81 134.92 110.15 215.23 30.84 229.31 139.21 118.05 90.94 170.92 161.54 146.02 146.47 711.8
KNA53844 (VCV51_033232)
 15035.89 5.36 3658.06 20228.87 99.02 552.26 750.81 78.69 1815.68 17097.26 6.09 603.38 11141.88 3.09 1.35 2027.83 2511.31 19.48 11.17 1750.86 2319.42 2013.6 63.51
KNA53869 (CspD)
 1257.23 13.68 1886.99 1314.95 2033.59 2676.12 2218.39 1261.53 686.79 3329.01 66.17 562.87 2280.08 17.99 9.18 468.05 371.24 103.96 132.82 674.71 660.54 761.03 2234.76
KNA53880 (VCV51_030816)
 4180.23 34.75 8701.93 685.3 29.77 58.71 55.43 22.42 682.1 200.86 58.09 298.76 243.01 40.84 37.02 760.87 758.98 38.23 59.82 873.61 506.02 6102.64 1395.56
KNA54613 (VCV51_030715)
 166.98 92.45 1091.58 159.23 64.4 85.7 79.62 57.65 146.18 183.94 94.0 177.92 106.26 95.11 62.48 143.92 151.16 130.21 134.05 155.57 162.1 160.47 194.96
KNA54624 (VCV51_030724)
 18.74 27.57 25.18 20.33 3.48 2.75 2.71 4.19 22.67 3.94 11.62 21.59 3.96 25.39 24.39 12.22 10.71 10.7 12.23 21.67 18.68 20.49 28.46
KNA54640 (VCV51_033214)
 1.67 0.0 18.67 0.0 3.5 1.39 3.57 0.0 0.0 1.17 0.0 0.0 0.0 0.0 24.28 0.0 0.0 1.6 1.05 0.0 0.0 0.0 0.0
KNA55338 (VCV51_031034)
 213.9 36.78 662.99 205.36 26.61 27.26 20.89 22.62 205.6 68.19 28.08 191.73 86.89 64.53 62.02 205.98 239.08 96.53 97.02 275.13 197.61 234.56 658.61
KNA55709 (VCV51_031017)
 9.89 23.26 56.04 5.92 5.4 5.03 5.04 5.09 5.21 10.77 23.95 39.02 13.6 19.04 16.17 24.02 18.68 11.7 12.65 6.25 6.77 6.46 19.68
KNA55854 (VCV51_033012)
 644.51 61.33 498.62 424.72 847.61 819.81 727.8 773.25 136.81 862.71 366.9 57.46 1128.78 59.85 54.49 259.87 222.0 467.9 515.61 136.68 119.89 139.98 241.18
KNA56153 (VCV51_030893)
 77.51 255.02 508.56 29.16 5.48 6.2 6.98 4.33 34.96 47.98 101.81 99.86 24.19 214.51 184.88 45.68 35.85 341.83 389.48 34.42 58.13 71.21 49.84
KNA56866 (IscX)
 371.33 11.26 918.7 261.14 533.9 492.26 495.33 551.03 2.92 293.71 233.71 35.21 192.1 10.17 1245.99 32.5 34.41 339.11 199.18 2.57 2.99 5.12 299.0
KNA56963 (VCV51_032889)
 0.76 0.28 16.55 0.45 0.51 0.38 0.42 0.68 1.31 0.35 0.2 1.51 0.27 0.09 0.19 1.21 1.14 0.29 0.43 0.92 0.48 0.7 1.73
KNA57832 (VCV51_032801)
 271.56 11.69 76.52 136.7 75.62 80.57 92.02 57.55 67.98 61.24 100.11 0.0 135.69 11.42 128.45 0.0 0.0 137.26 148.61 82.71 99.8 99.84 0.0
KNA58533 (VCV51_032722)
 35.08 1.32 16.79 61.25 28.45 17.58 19.92 21.05 2.83 3.83 10.22 0.0 1.56 1.28 19.22 0.0 0.0 4.32 5.27 7.45 0.73 1.0 0.0
KNA58570 (VCV51_032730)
 660.88 129.09 4056.59 847.92 394.04 374.91 356.04 350.41 407.25 805.31 185.04 391.29 1537.62 109.41 141.42 1360.67 1391.94 521.47 470.2 485.13 626.32 420.77 1059.55
KNA58920 (VCV51_032610)
 148.33 2.69 21.55 100.15 27.9 32.38 31.55 25.11 35.74 16.7 22.27 11.94 17.37 3.51 13.32 64.45 54.06 63.67 54.56 52.82 57.17 49.36 27.9
KNA59342 (VCV51_032561)
 3303.14 64.68 3296.02 2949.57 35.83 33.81 39.91 18.08 469.58 1120.18 165.34 448.95 1177.74 54.19 137.96 1403.47 1348.38 1108.71 1395.79 562.16 770.42 715.49 2696.37
KNA59747 (VCV51_032442)
 239.02 25.17 387.05 184.59 184.07 143.89 152.35 142.49 155.67 143.84 84.72 106.56 156.98 21.59 97.96 104.06 173.96 123.58 144.43 167.35 175.24 184.32 147.73
KNA59754 (VCV51_032449)
 50.72 3.03 8.1 99.51 2.66 3.14 4.94 4.84 0.0 1.91 3.15 0.0 1.01 10.9 4.62 9.16 6.28 1.81 0.43 0.0 0.0 0.0 4.46
KNA59819 (VCV51_030879)
 5.99 10.21 179.74 4.86 2.54 2.85 2.88 2.24 6.18 13.75 90.6 11.55 10.3 7.54 5.52 30.63 36.88 12.74 14.89 6.94 5.16 5.72 23.85
KNA59821 (VCV51_030881)
 4.46 31.24 194.13 2.91 2.49 2.93 3.38 2.54 8.0 16.13 129.99 14.74 7.79 16.95 23.76 17.45 23.1 6.69 10.86 11.86 8.24 7.42 37.36
KNA59964 (VCV51_032376)
 6920.55 1553.09 11074.6 5121.88 86.33 108.61 89.95 83.56 11884.26 79.71 9761.75 1049.12 71.65 1883.23 1448.52 93.4 168.38 108.88 124.55 6368.89 5669.98 9885.34 231.5
KNA60003 (VCV51_032415)
 0.01 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
KNA60007 (VCV51_032419)
 101.59 45.14 412.26 83.09 33.39 23.21 16.55 14.21 120.26 4.41 343.54 341.48 1.61 75.28 23.39 121.22 165.99 3.58 4.61 74.39 49.06 86.26 50.49
KNA60008 (VCV51_032420)
 0.0 0.0 0.89 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
KNA60533 (VCV51_032204)
 39.21 58.85 114.1 37.25 63.15 51.17 48.08 59.43 23.21 10.24 66.57 63.57 13.38 49.71 50.19 25.99 40.54 13.93 14.89 19.91 19.34 19.05 75.37
KNA60709 (VCV51_032148)
 1748.84 26.79 879.14 2045.64 838.17 1199.59 1083.57 625.46 978.03 1127.88 87.42 419.37 1042.83 26.11 25.76 250.57 328.26 850.81 793.1 1017.43 754.01 958.82 483.3
KNA60777 (VCV51_032039)
 214.64 27.77 33.35 246.88 138.02 138.94 147.15 115.79 22.52 70.39 79.4 46.18 70.43 28.8 39.56 27.33 39.72 63.39 71.32 21.43 21.43 23.66 28.22
KNA60790 (VCV51_032052)
 6.95 5.6 187.71 6.71 5.31 4.82 5.02 4.51 8.66 4.95 53.09 9.46 5.23 6.89 4.45 8.72 12.36 32.91 19.23 8.63 8.05 9.34 42.77
KNA60805 (VCV51_032067)
 14054.48 3285.32 80137.97 16727.6 2519.64 1744.03 1686.23 3063.02 5540.28 797.56 10734.08 5251.57 683.7 3944.72 5995.49 8217.1 15198.67 1921.04 2477.04 4263.12 4362.24 4913.38 19731.49
KNA60938 (VCV51_031913)
 1407.11 45.9 103.38 828.01 38.13 56.15 48.32 26.52 247.01 665.35 182.57 360.48 1125.38 29.52 24.73 167.42 362.91 506.83 482.43 299.57 271.28 328.65 0.0
KNA61028 (VCV51_032003)
 32.85 14.47 49.33 19.68 45.08 42.82 38.82 42.15 19.43 39.23 14.85 30.5 40.05 11.25 39.53 5.55 8.75 11.93 11.89 30.01 22.26 25.52 34.55

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)