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Heatmap: Cluster_17 (HCCA)

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(Showing raw values)

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Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA47629 (VCV51_033875)
 0.06 9.43 0.08 0.21 0.0 0.0 0.0 0.0 0.04 0.0 0.0 1.5 0.0 14.89 0.23 0.01 0.0 0.0 0.0 0.0 0.08 0.0 0.0
KNA47894 (VCV51_033874)
 221.06 15521.07 793.63 123.98 385.29 106.37 97.45 378.83 3000.6 20.03 3963.65 1932.29 40.38 12610.5 1695.79 12110.98 14497.98 2926.71 2783.11 2862.97 2629.03 2831.43 1623.97
KNA49490 (VCV51_030298)
 7.15 24.73 4.43 4.05 30.77 32.46 32.63 31.83 9.94 13.79 33.34 36.06 13.65 21.42 36.46 13.33 12.96 50.76 33.52 9.07 10.08 10.75 8.96
KNA49652 (VCV51_030208)
 1.76 865.64 1.65 1.58 2.27 2.25 2.17 2.23 1.87 3.3 2.28 3.28 2.65 510.03 3.52 4.63 5.82 4.84 5.61 1.76 1.88 1.72 35.12
KNA49653 (VCV51_030209)
 1.36 1929.87 0.65 0.83 0.84 0.91 1.04 0.67 1.48 1.6 1.48 1.49 1.2 1253.46 4.48 2.99 3.23 3.45 3.53 1.43 1.51 1.38 4.66
KNA51532 (VCV51_033572)
 6.82 40.12 1.79 7.11 1.71 3.46 2.26 2.18 5.1 4.87 5.41 4.39 2.86 25.17 12.76 1.63 2.45 5.32 5.3 4.98 4.17 4.28 5.19
KNA52279 (VCV51_033445)
 12.54 16.02 7.3 11.4 11.15 12.83 12.77 13.31 21.17 9.97 14.11 21.0 9.49 16.42 47.52 10.82 12.68 20.31 20.15 17.82 15.5 22.77 15.9
KNA53608 (VCV51_033300)
 78.34 231.18 92.34 68.8 63.96 64.46 66.89 62.26 95.35 59.74 162.34 140.79 53.24 248.22 157.56 106.69 124.55 111.94 99.52 68.26 56.65 99.07 82.27
KNA53859 (VCV51_030796)
 25.3 150.42 9.17 21.29 75.04 42.88 63.61 79.63 56.78 22.64 29.71 33.36 14.45 140.31 27.73 22.37 20.24 31.33 31.18 43.87 35.77 50.95 20.21
KNA55084 (VCV51_031849)
 51.58 717.12 13.94 44.89 46.27 41.22 51.01 46.78 79.92 82.13 202.19 229.51 112.47 628.35 121.69 69.11 91.16 72.99 76.46 71.07 88.07 73.18 97.07
KNA55289 (VCV51_033102)
 47.77 324.19 50.38 28.6 74.35 71.94 72.44 74.49 60.32 22.68 111.83 91.38 29.34 390.3 58.12 165.19 129.15 108.83 119.04 59.49 64.65 65.75 58.44
KNA55993 (VCV51_030911)
 11.17 21.31 8.14 6.9 65.88 60.45 67.06 65.41 12.78 7.58 64.87 71.47 5.87 17.0 90.36 17.65 12.51 42.39 30.05 10.66 10.6 13.07 12.87
KNA56275 (VCV51_032898)
 21.32 217.82 8.45 11.86 68.69 49.55 61.89 61.51 62.55 44.51 119.03 69.93 46.25 269.46 38.05 43.09 30.6 45.54 52.55 51.47 54.62 73.65 33.18
KNA56859 (IscR)
 123.45 352.96 400.8 81.93 334.43 282.47 336.9 263.16 447.45 82.57 117.82 313.76 56.07 308.17 184.55 120.67 137.22 236.07 250.42 298.59 259.26 419.21 181.22
KNA56860 (IscS)
 96.22 279.43 293.07 68.3 504.47 541.57 618.3 495.2 269.84 199.68 201.46 461.16 138.21 233.34 496.75 145.16 149.64 422.9 379.84 203.96 186.67 252.86 196.98
KNA56861 (VCV51_030498)
 174.95 247.53 611.78 135.38 839.94 848.52 921.05 827.2 271.31 296.87 296.77 484.46 211.84 201.99 678.5 234.75 256.49 915.6 602.31 254.98 256.91 264.66 226.27
KNA56862 (IscA)
 509.75 837.31 1065.97 422.87 1145.73 1160.03 1175.38 1139.0 759.24 518.29 351.6 525.21 358.42 883.05 563.53 493.63 536.43 1374.25 834.18 744.64 729.45 759.52 232.02
KNA56863 (HscB)
 27.35 149.28 81.78 21.0 85.79 92.19 99.58 82.62 19.95 106.7 95.92 184.79 81.02 156.78 168.41 165.89 167.63 232.77 168.33 22.28 21.72 22.51 70.16
KNA56864 (HscA)
 23.01 129.06 69.95 16.37 89.8 98.96 111.98 95.06 32.06 92.11 95.14 145.59 65.64 123.22 179.3 118.17 119.04 213.26 132.88 31.77 30.48 32.46 45.22
KNA56865 (VCV51_032862)
 163.99 477.47 292.53 92.81 420.31 383.69 393.55 419.95 181.02 198.75 280.94 258.79 140.66 494.81 407.05 205.18 211.76 614.73 362.85 170.72 172.73 214.77 102.49
KNA56933 (VCV51_030557)
 23.71 633.16 3.57 17.06 5.74 7.18 5.66 4.43 26.48 5.16 5.47 192.96 4.18 1005.39 45.91 31.88 41.47 8.37 8.72 22.32 21.26 26.36 21.69
KNA56937 (TcpB)
 4.27 1281.64 0.9 2.74 3.12 3.17 3.22 2.24 5.31 3.94 6.8 241.46 3.86 2080.0 101.64 5.2 6.31 8.68 9.77 4.23 4.0 5.18 6.83
KNA56938 (VCV51_032881)
 6.26 2051.84 1.58 4.5 10.19 12.29 10.47 6.94 5.32 8.68 17.56 850.14 8.17 3365.25 244.03 11.64 14.5 8.82 11.35 4.27 5.61 4.23 8.36
KNA56939 (VCV51_030562)
 8.25 1454.19 1.48 5.22 8.58 9.38 8.57 6.11 7.27 7.92 13.96 570.81 8.38 2538.14 113.47 22.53 26.91 11.41 13.05 5.86 6.3 7.51 7.72
KNA56940 (VCV51_030563)
 4.02 2126.59 1.13 2.95 5.74 6.15 5.23 5.55 2.7 3.86 11.34 557.11 4.82 4186.58 62.23 33.24 41.2 5.1 4.16 2.81 2.26 3.64 3.58
KNA56945 (VCV51_030569)
 2.38 1775.48 1.67 1.73 10.93 11.63 11.11 8.48 2.14 5.22 15.37 629.33 5.82 2776.15 155.43 18.08 20.61 7.0 7.0 1.52 1.51 1.84 11.08
KNA56946 (VCV51_030570)
 1.16 543.48 0.59 0.78 5.09 4.99 5.39 5.16 1.29 3.71 6.63 183.41 2.22 667.94 68.1 3.85 3.61 1.36 1.64 1.27 0.77 1.15 4.72
KNA56947 (AcfB)
 5.56 1929.99 2.19 3.24 10.96 11.49 12.02 8.98 6.68 8.47 16.66 315.94 6.7 2628.36 212.95 20.38 19.27 8.72 9.7 4.91 4.9 6.43 17.87
KNA58257 (NspC)
 1.34 32.48 1.47 1.7 10.32 10.47 6.0 9.1 0.39 8.66 0.45 0.64 6.63 48.71 43.85 1.01 0.83 8.32 7.28 2.23 2.26 2.24 4.34
KNA59392 (VCV51_031300)
 9.1 6.55 15.5 6.52 30.93 30.59 31.53 30.19 20.93 12.33 14.23 18.36 6.05 5.73 11.59 7.69 6.99 16.08 14.56 14.42 13.81 18.72 7.04
KNA59777 (VCV51_032472)
 42.27 146.17 24.62 29.66 79.22 71.52 73.17 80.53 70.22 27.31 163.85 133.05 46.5 138.61 125.85 42.43 54.99 65.67 80.2 53.89 52.35 66.57 70.73
KNA59778 (VCV51_032473)
 71.07 400.49 130.99 73.6 93.84 88.51 88.65 104.22 312.94 29.82 373.59 276.2 15.41 406.65 679.61 39.52 59.02 65.76 66.38 141.25 104.9 172.05 64.73
KNA59781 (VCV51_032476)
 8.34 127.78 15.64 9.38 21.52 15.77 17.86 23.04 25.6 6.46 72.23 55.05 5.18 118.66 123.25 10.03 15.63 29.46 32.88 15.92 11.54 13.31 26.89
KNA59794 (VCV51_032490)
 13.64 22.05 9.41 9.86 39.29 36.33 39.85 38.48 15.06 17.44 52.0 88.21 13.0 19.32 62.81 9.68 12.57 72.77 54.47 12.13 12.66 17.16 25.82
KNA59815 (VCV51_032498)
 4.26 4.99 1.66 2.93 2.32 2.89 2.77 2.49 12.96 3.01 4.57 12.32 2.73 4.89 23.04 5.14 8.16 7.33 6.23 11.4 7.93 12.85 7.53
KNA59869 (VCV51_032280)
 96.11 250.23 71.04 79.38 101.59 110.17 109.35 77.93 249.19 62.89 58.41 338.67 72.25 378.24 59.07 109.1 134.4 144.96 160.18 204.13 165.3 225.11 107.3
KNA59880 (VCV51_032291)
 29.84 93.35 16.81 53.45 13.17 13.98 13.73 9.99 207.08 33.78 76.38 216.22 22.61 77.35 77.31 45.07 83.66 40.98 44.19 138.54 111.41 74.7 85.05
KNA59907 (VCV51_032318)
 2.6 8.66 2.26 2.57 1.7 2.4 2.54 2.56 5.31 4.57 3.63 9.24 2.37 5.76 7.02 2.59 5.05 2.16 2.1 5.53 4.04 4.98 6.19
KNA59915 (VCV51_032326)
 7.86 18.55 4.85 7.48 6.08 6.19 6.25 5.77 13.8 9.4 9.83 20.46 7.07 16.8 19.52 8.08 10.53 12.77 13.66 11.6 9.39 12.82 11.6
KNA59991 (VCV51_032403)
 27.62 148.91 20.34 18.3 100.4 73.78 91.28 92.94 48.95 35.18 80.94 134.34 35.44 166.83 154.45 23.95 26.53 425.5 316.55 39.36 42.79 47.55 18.71
KNA59992 (VCV51_032404)
 22.06 76.69 15.12 16.56 68.48 62.39 70.83 72.89 34.54 28.6 72.91 112.8 29.56 78.01 192.8 18.58 25.66 277.78 238.21 26.3 29.59 33.95 27.18
KNA59998 (VCV51_032410)
 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.04 0.05 0.15 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.05
KNA60015 (VCV51_032427)
 10.68 10.77 3.42 5.73 13.53 13.91 15.16 14.34 11.78 32.75 22.54 30.93 14.64 12.63 10.05 5.55 7.95 13.78 14.45 13.29 10.0 12.53 8.01
KNA60016 (VCV51_032428)
 9.34 10.96 5.4 7.03 12.69 13.01 14.19 13.13 14.78 36.25 28.62 45.1 20.28 13.6 11.9 4.94 6.09 9.19 9.36 12.67 7.79 12.21 9.52
KNA60686 (VCV51_032125)
 12.68 41.69 8.94 10.72 12.86 12.58 14.44 11.89 29.9 11.98 20.13 36.84 11.34 39.73 43.69 24.0 33.22 17.05 20.52 30.55 21.05 26.49 34.35
KNA60724 (VCV51_032163)
 48.92 159.68 50.95 51.24 72.81 77.14 83.27 71.0 83.6 78.6 119.5 136.82 50.69 169.4 191.18 66.08 91.58 92.18 102.52 61.41 46.34 61.2 94.64
KNA60794 (VCV51_032056)
 3.07 22.66 1.01 2.85 1.98 2.08 1.74 1.56 3.17 2.39 28.71 17.87 1.28 22.51 17.63 2.77 3.59 4.13 4.18 3.12 3.04 3.09 2.12
KNA60928 (VCV51_031902)
 10.66 24.98 3.96 8.34 3.08 3.14 3.11 3.02 12.16 5.57 18.45 16.97 3.83 21.02 15.44 7.5 10.66 11.99 12.62 11.15 9.83 12.33 13.62

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)