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Heatmap: Cluster_14 (HCCA)

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Gene
0.02% arabinose,A1552
0.5mM indole,N16961
37C,C6706
arabinose-,A1552
E-exponential,5uM AI-2,C6706
E-exponential,5uM CAI-1,C6706
E-exponential,5uM DPO,C6706
E-exponential,Water,C6706
empty Tn
E-stationary,0.2% L-arabinose,C6706
LB(2% NaCl),30C,N16961
LB,C7258
Log,0.2% L-arabinose,C6706
Methanol,N16961
O395
Polymyxin,C6706
Polymyxin,VC1639
riboflavin-,N16961
riboflavin+,N16961
TnqstR
TntfoY
TntoX-strep
Water,Rich,N16961
KNA49525 (VCV51_030324)
 4.35 1.74 2.09 4.11 2.16 2.02 1.89 1.62 4.95 2.73 1.53 4.12 2.4 1.64 2.46 8.32 9.45 5.18 5.85 4.26 4.79 4.78 5.5
KNA50224 (VCV51_030259)
 51.14 47.25 35.02 50.27 24.3 26.35 26.95 23.0 79.58 65.4 69.83 82.26 46.97 48.37 51.13 89.2 95.64 67.31 73.32 55.11 70.08 75.27 51.49
KNA50408 (VCV51_031431)
 682.89 792.56 1018.38 624.37 1034.95 1032.48 1145.3 1137.6 2848.67 1255.93 343.42 1938.38 2325.99 777.84 1178.88 1386.45 1087.21 687.16 729.65 2526.31 2287.72 2336.63 1507.14
KNA51521 (VCV51_033560)
 121.44 116.58 97.7 98.91 152.52 170.65 160.07 113.62 171.87 191.97 100.89 164.07 225.02 116.18 42.67 154.41 215.47 105.48 110.41 167.83 157.22 138.33 220.88
KNA51551 (VCV51_033594)
 3.3 1.18 1.48 2.92 1.25 1.47 1.46 1.12 7.06 3.11 1.77 3.29 2.3 1.1 3.84 1.95 3.03 7.93 8.14 6.2 4.95 5.86 3.68
KNA51556 (VCV51_033599)
 10.8 8.75 31.44 7.4 13.18 18.48 17.25 10.31 15.39 10.45 7.07 22.83 13.03 8.73 2.97 18.95 28.53 20.2 19.61 13.03 15.26 14.86 21.59
KNA52217 (VCV51_033475)
 9.14 13.31 3.28 6.67 23.95 22.1 21.17 20.47 30.86 12.04 14.61 11.4 16.36 14.49 10.68 11.31 13.72 16.69 17.18 24.74 21.93 27.81 25.91
KNA52266 (VCV51_033431)
 11.97 5.38 3.86 9.44 5.19 5.68 5.13 4.09 11.35 7.22 5.19 7.7 7.03 7.72 7.32 7.76 10.44 13.39 15.49 12.23 15.06 11.31 25.72
KNA52748 (VCV51_033381)
 9.86 7.69 6.06 9.63 5.82 7.27 7.25 5.89 38.29 10.48 6.37 11.74 10.98 7.65 28.05 13.06 12.88 18.96 16.53 34.81 20.68 37.14 19.0
KNA53562 (VCV51_030043)
 128.95 110.68 82.6 80.2 92.56 72.14 75.35 76.33 216.25 62.53 74.93 65.04 75.51 133.09 84.4 54.07 75.6 232.28 278.74 228.99 257.02 227.06 136.91
KNA53583 (VCV51_030061)
 14.42 22.31 10.44 11.51 15.71 16.05 16.76 15.5 36.15 16.75 19.84 25.31 17.87 22.93 28.7 32.67 35.57 40.96 44.22 31.19 29.8 40.02 31.51
KNA53593 (VCV51_030071)
 108.63 41.61 105.66 71.04 47.68 51.45 52.67 51.42 118.0 189.85 196.34 231.61 221.16 44.04 205.71 182.11 197.87 388.09 398.96 96.69 104.44 128.97 257.31
KNA53677 (VCV51_030032)
 503.55 201.38 203.4 333.68 124.87 140.83 152.67 120.98 702.24 322.85 335.09 455.5 294.66 198.85 881.19 297.13 394.53 908.24 989.93 794.86 803.69 964.06 483.27
KNA53758 (VCV51_033275)
 5908.54 219.88 18102.15 4207.51 1043.88 1383.73 1196.71 1063.01 43118.2 1514.37 1821.58 188.79 6381.02 158.17 117.04 285.81 389.8 385.37 407.98 35740.9 25306.85 31630.35 73.11
KNA53790 (VCV51_033264)
 150.84 3.03 64.46 64.93 4.19 8.0 8.3 3.61 147.5 134.18 24.31 133.72 377.69 2.1 3.04 44.86 66.96 23.4 15.62 126.41 103.57 174.74 20.48
KNA53791 (FadA)
 162.18 4.33 83.96 108.31 9.69 13.1 14.86 9.18 109.43 147.62 18.36 225.96 288.79 3.35 15.36 65.58 104.48 42.91 32.79 97.73 99.55 135.29 31.35
KNA53792 (VCV51_031853)
 13.88 8.52 14.15 8.7 11.26 10.14 11.22 8.67 11.42 17.08 14.48 21.86 13.79 7.89 9.6 10.87 13.78 8.35 10.09 11.28 10.59 14.12 15.25
KNA53853 (VCV51_033234)
 98.77 30.62 383.16 93.67 41.98 38.32 38.06 34.17 158.66 61.94 17.85 38.49 88.24 26.97 12.95 148.53 152.15 209.22 164.75 170.86 214.27 140.35 177.9
KNA54653 (VCV51_030743)
 264.04 162.22 369.65 205.56 169.17 115.96 135.51 129.94 257.47 224.06 214.13 176.28 412.69 143.61 119.62 235.01 226.08 676.2 683.35 275.82 333.98 218.26 520.88
KNA54882 (VCV51_031808)
 39.58 14.13 7.05 25.92 16.0 13.32 15.4 15.5 44.85 15.86 22.49 17.34 55.68 13.2 18.11 27.33 43.57 61.71 54.22 41.15 42.28 39.66 42.21
KNA54883 (VCV51_033125)
 119.25 85.21 82.33 60.55 53.39 58.4 60.04 54.91 174.19 113.94 99.21 117.27 123.62 85.94 57.06 98.12 158.53 177.73 186.55 179.94 185.84 253.01 190.66
KNA54904 (VCV51_031792)
 37.43 48.55 28.13 28.31 63.23 62.92 63.5 59.06 56.76 50.93 55.51 88.14 40.03 53.07 76.5 31.68 39.32 84.22 94.3 48.19 153.29 54.68 92.38
KNA54911 (VCV51_031788)
 17.36 31.7 9.85 14.42 36.61 34.89 38.41 32.47 31.17 32.06 33.05 40.12 25.95 34.84 46.63 21.83 25.99 61.14 58.99 27.83 28.2 34.21 31.81
KNA54964 (KefG)
 61.38 16.56 37.35 38.41 31.86 32.96 35.86 30.02 52.69 46.87 45.3 103.12 55.98 12.41 50.5 71.33 96.96 73.5 78.98 46.08 52.52 62.89 79.07
KNA54965 (VCV51_031741)
 49.37 17.09 32.75 30.42 15.66 14.5 15.29 14.4 56.79 16.77 23.62 49.87 20.07 14.28 23.9 28.68 35.41 53.45 52.98 56.09 56.9 66.45 43.73
KNA55087 (VCV51_031846)
 35.51 30.15 22.62 24.47 15.76 15.56 17.24 14.62 33.34 36.33 29.36 48.8 44.95 34.56 28.47 31.73 44.8 25.83 27.74 29.1 29.72 43.35 56.37
KNA55116 (VCV51_033120)
 717.35 130.6 1252.4 762.21 349.58 347.51 310.0 358.73 1711.5 316.2 83.35 1110.8 585.72 135.52 192.6 409.57 569.97 420.15 413.06 2036.69 1557.21 1903.35 1154.74
KNA55123 (RecG)
 37.65 26.73 19.41 18.8 23.48 24.75 23.57 21.68 39.59 36.53 33.21 61.41 35.09 25.35 34.59 32.45 38.32 92.56 106.92 38.2 40.65 58.64 64.87
KNA55272 (VCV51_033085)
 53.73 4.2 40.39 29.17 6.74 6.93 7.72 4.83 66.2 16.47 4.61 26.69 26.32 4.0 5.29 25.07 23.63 5.78 4.94 76.96 57.5 91.39 17.56
KNA55367 (VCV51_033044)
 7.46 8.6 3.67 4.26 9.55 8.89 10.22 7.44 16.21 11.15 8.81 11.03 8.71 8.84 10.11 11.18 8.42 8.85 11.05 12.79 15.42 19.31 7.09
KNA55690 (VCV51_033026)
 3613.63 194.53 1026.24 5414.62 187.04 161.19 172.61 114.29 5471.24 486.58 213.2 152.12 561.56 222.57 117.32 297.9 246.13 880.53 685.3 4735.42 4425.64 4575.4 141.9
KNA56415 (VCV51_030686)
 42.93 16.57 13.11 25.91 14.94 18.24 16.55 14.12 50.71 64.02 25.8 58.83 50.48 17.64 14.56 31.58 26.55 78.09 83.87 46.86 78.04 75.68 48.79
KNA57460 (VCV51_030450)
 57.89 75.11 32.24 43.78 48.04 45.84 47.42 35.85 120.38 42.38 52.4 42.29 42.68 86.08 17.91 105.15 132.82 99.78 107.85 105.2 118.1 129.05 82.65
KNA58530 (VCV51_031168)
 54.93 4.81 18.77 22.93 6.97 11.41 11.73 6.0 125.81 27.93 14.0 41.7 222.0 3.21 3.16 29.18 25.52 9.81 11.15 122.27 69.36 119.95 14.09
KNA59361 (VCV51_031325)
 43.0 29.3 19.07 29.4 13.78 13.23 14.92 12.29 67.09 17.83 32.26 45.27 18.45 27.36 3.36 59.97 51.09 75.31 82.57 59.22 72.54 74.2 66.01
KNA59384 (VCV51_031306)
 51.1 21.48 38.17 32.32 38.06 36.26 34.76 27.95 91.96 19.98 25.52 36.89 26.08 20.4 12.29 60.95 43.64 54.88 61.0 82.99 82.64 104.33 60.8
KNA59640 (VCV51_032537)
 31.2 49.58 25.44 23.8 24.09 24.48 25.8 19.83 153.09 45.09 15.52 78.62 85.53 52.64 17.16 73.9 54.88 34.2 33.77 136.0 109.36 124.45 67.91
KNA59643 (VCV51_032540)
 5.28 14.59 3.37 4.57 12.58 12.51 13.64 12.4 8.28 8.16 16.57 18.15 8.07 15.53 23.96 13.63 11.53 12.86 15.05 7.39 6.75 8.17 15.42
KNA59746 (VCV51_032441)
 86.09 106.61 26.41 53.92 120.77 141.52 160.63 112.83 185.41 140.01 53.7 110.42 106.34 121.19 142.97 36.73 48.07 187.05 202.59 149.44 177.99 187.61 120.2
KNA59756 (VCV51_032451)
 78.67 6.95 29.57 89.72 14.17 20.39 20.18 12.56 111.76 137.22 13.21 97.29 120.55 7.01 5.28 33.87 72.74 48.11 49.46 92.73 86.81 98.55 60.12
KNA59758 (VCV51_032453)
 187.72 16.26 239.13 133.94 35.92 27.3 34.25 26.65 272.96 73.0 51.11 73.18 201.45 18.73 8.2 48.74 93.67 62.81 60.77 234.23 232.09 201.56 36.59
KNA59791 (VCV51_032486)
 63.74 41.15 20.26 48.78 50.29 55.64 53.75 52.3 128.91 63.13 37.6 48.2 50.95 38.35 22.89 33.48 46.07 68.0 61.72 121.02 135.97 135.45 92.22
KNA59875 (VCV51_032286)
 14.0 8.28 4.51 9.57 6.95 8.9 7.73 6.23 17.33 11.02 8.18 11.54 9.44 7.66 7.08 13.09 15.95 21.42 25.66 16.67 15.23 18.98 6.41
KNA59892 (VCV51_032303)
 6.25 4.88 2.63 3.95 4.34 4.77 4.88 4.2 7.41 11.31 3.49 12.88 8.57 5.18 5.8 4.14 6.3 18.59 22.69 6.62 6.5 8.06 5.61
KNA59900 (VCV51_032311)
 5.03 1.13 1.9 3.67 3.02 2.69 2.57 2.7 7.73 2.48 0.81 1.75 1.74 1.43 2.59 2.37 3.87 6.4 6.15 7.29 7.0 6.96 6.0
KNA59950 (VCV51_032362)
 298.68 280.78 129.0 293.29 301.85 305.15 291.59 264.47 808.59 262.0 143.2 188.59 395.3 274.34 118.69 437.02 641.73 201.42 199.37 722.73 656.36 712.38 198.66
KNA59957 (VCV51_032369)
 79.99 9.09 51.39 65.31 112.7 92.99 92.23 100.2 60.18 69.31 24.09 64.55 90.68 8.0 37.2 41.73 67.81 62.74 67.37 53.14 61.82 52.88 76.24
KNA60011 (VCV51_032423)
 179.26 51.79 698.54 205.92 47.71 47.54 48.25 39.56 272.45 146.19 17.14 65.67 339.94 43.78 15.08 196.19 432.51 553.39 481.53 339.99 532.65 233.3 62.65
KNA60545 (VCV51_032216)
 4.06 0.8 1.81 2.21 2.04 2.35 2.27 1.87 1.5 3.4 0.54 3.23 3.32 0.88 2.87 3.59 4.49 7.82 8.45 2.54 1.92 2.34 5.45
KNA60685 (VCV51_032124)
 29.7 15.14 18.36 12.92 16.56 13.92 12.89 12.68 23.05 86.48 32.69 66.11 23.74 15.76 4.48 24.68 31.09 37.67 38.44 94.02 65.49 52.04 35.17
KNA60699 (VCV51_032138)
 23.0 6.52 8.4 16.49 6.76 6.55 7.48 5.78 26.49 19.47 9.29 39.65 19.78 6.0 3.07 17.56 27.05 19.86 19.12 24.28 22.79 28.71 25.62
KNA60703 (VCV51_032142)
 10.79 3.5 2.63 6.98 6.27 6.0 6.12 5.13 11.81 5.33 3.14 5.39 5.11 3.66 2.88 6.54 8.35 5.84 6.84 10.69 11.59 11.23 9.15
KNA60704 (SoxR)
 41.67 31.83 9.65 14.92 29.17 26.67 30.52 25.53 28.33 26.48 26.95 24.32 36.26 30.46 23.78 14.79 25.75 67.86 75.93 33.11 30.21 34.42 53.34
KNA60734 (VCV51_032174)
 83.4 22.32 146.43 62.62 272.39 240.81 229.66 255.48 30.87 236.86 62.6 160.25 206.91 23.51 76.95 43.47 71.03 373.47 404.78 36.27 48.93 39.53 219.27
KNA60811 (VCV51_032074)
 427.11 5.94 73.85 400.01 15.26 17.04 15.13 16.25 421.16 282.64 16.69 83.9 166.56 3.21 20.4 175.75 267.55 71.81 73.1 306.18 229.62 359.95 29.19
KNA60931 (VCV51_031905)
 3.49 2.66 0.91 2.12 2.05 2.3 2.14 1.7 4.28 3.38 2.31 3.21 2.57 2.15 0.66 2.08 2.94 7.46 8.22 4.31 3.7 4.73 2.77
KNA60932 (VCV51_031906)
 1.38 0.09 0.46 1.18 0.8 0.81 0.79 0.46 1.5 1.63 0.25 0.38 1.2 0.23 0.41 1.35 1.9 1.35 1.46 1.58 1.61 1.7 1.08
KNA60933 (VCV51_031907)
 22.85 3.13 14.02 17.43 4.01 4.05 4.26 3.34 20.19 7.42 3.57 13.29 6.42 3.04 4.57 11.78 19.12 50.36 49.15 24.52 29.71 23.65 20.01
KNA60934 (VCV51_031908)
 2.16 0.73 0.39 1.68 1.18 0.93 1.26 0.83 3.68 2.4 0.71 1.57 1.31 0.73 1.24 0.95 1.72 6.06 6.19 3.48 3.29 4.01 2.21
KNA60935 (VCV51_031909)
 1.81 0.55 0.82 0.92 1.49 1.3 1.31 1.32 1.47 2.39 0.59 2.0 1.58 0.51 1.06 0.87 1.9 2.03 2.41 1.62 1.91 1.79 1.59
KNA61034 (VCV51_032009)
 88.03 25.39 26.99 117.37 27.4 34.74 34.62 26.71 123.65 55.93 23.47 153.96 52.53 26.26 24.45 33.87 64.82 297.23 212.21 100.29 78.51 106.1 122.12

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)