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Heatmap: Cluster_48 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
H37Rv,WT
H37Rv,T4 20 µM, 12h
HS,Ps1_STM_6_A
N0155,WT,7H9
Lab,Tn6:Rv3869
HS,Cr2_00-R1301
Lab,Mp12_209
H37Rv
HS,Ps1_EMB_6_A
CDC1551,WT
N0155,rpoB Ser450Leu,7H9
HS,Cr3_01-R1422
H37Rv,T10 20 µM, 48h
HS,Ps5_OFXS-1
Lab,Cr7_auxRIF-R2
Lab,Cr8_MC26020
HS,Ps2_EMB_6_B
HS,Ps1_STM_6_B
Lab,Mp8_Rv1049
Lab,Mp3_Rv2989
H37Rv,T4 20 µM, 24h
Lab,Mp9_Rv1963c
HS,Ps1_0_A
H37Rv,DMSO 0.4%, 0h
Lab,Tn9:Rv3214
Lab,Tn7:Rv2196
H37Rv,T4 20 µM, 48h
Lab,Mp4_Rv3334
HS,Ps1_CIP_6_A
HS,Ps2_EMB_6_A
HS,Ps1_ND_3_A
H37Rv,WT,Reaeration
Lab,Tn8:Rv1304
HS,Ps3_CIP_6_A
H37Rv,WT,0% DO
Lab,Tn5:Rv3083c
Lab,Mp2_Rv1152
HSTB
HS,Cr1_01-R0348
Lab,Cr6_auxRIF-R1
H37Rv,Log
HS,Cr4_98-01436
HS,Ps1_INH_3_B
Lab
HS,Ps3_CIP_6_B
HS,Ps3_STM_3_A
Lab,Tn4:Rv3323c
HS,Ps4_HN878
Lab,Tn3:Rv1819c
Lab,H37Rv
HS,Ps3_ND_3_B
HS,H37Rv,WT
HS,Cr5_OFXR-17
HS
Lab,Tn12_Tn209_ref
H37Rv,T10 20 µM, 24h
Lab,Tn10:Rv0758
H37Rv,pH 7.0
HS,Ps3_EMB_3_B
H37Rv,mycP1-eccE1 KO
CCP43543 (Rv0795)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP44129 (Rv1370c)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP44523 (Rv1757c)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP44529 (Rv1763)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP44880 (Rv2105)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP44945 (Rv2168c)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP45060 (Rv2278)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP45142 (Rv2354)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP45274 (Rv2480c)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP45446 (Rv2648)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP45615 (Rv2815c)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP45995 (Rv3184)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP45997 (Rv3186)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP46146 (Rv3325)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP46202 (Rv3381c)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35
CCP46296 (Rv3474)
 1.18 -1.24 1.15 -1.49 -0.34 0.55 0.16 -0.59 0.59 -3.0 -1.45 -1.44 -1.26 0.19 -0.19 0.23 -0.34 1.13 -0.37 -0.57 -1.42 0.41 0.58 -1.45 0.26 -0.59 -1.36 0.66 0.59 -0.57 0.92 -1.16 -0.66 -1.26 1.54 -0.12 -0.36 -0.2 1.05 -0.38 -0.69 1.71 0.52 -0.01 -1.16 -1.22 0.11 0.76 0.08 0.01 -1.02 -1.64 0.51 -0.14 0.24 -1.25 -0.34 -0.58 -1.4 -1.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.