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Heatmap: Cluster_8 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14144 (aruC)
 -0.2 0.11 -0.24 -0.13 -0.36 0.59 -0.3 -0.56 -0.44 -1.43 -0.79 -0.53 0.76 0.45 0.78 0.53 0.68 -0.83 -0.55 0.08
AKP14179 (mutM)
 -0.63 -0.37 -0.46 0.35 -0.58 0.89 -0.18 -0.72 0.11 -2.09 -1.74 -0.16 1.09 0.03 0.64 0.81 1.0 -1.36 -1.05 -0.49
AKP14193 (rlmN)
 0.17 0.15 -1.99 0.07 0.33 0.36 -0.16 0.28 -0.22 -2.22 -0.24 -0.47 0.84 0.18 0.08 0.29 0.46 -0.17 -2.38 0.6
AKP14271 (WX61_00182)
 -2.26 -2.69 -2.52 0.58 -0.54 1.29 -0.95 -1.46 -0.85 -2.97 -4.37 0.7 1.76 -1.61 1.09 1.02 1.62 -3.38 -3.08 -1.22
AKP14326 (ribA)
 -0.18 0.7 -1.45 0.33 -0.25 0.68 0.09 0.24 -0.31 -2.31 -0.69 -0.81 0.84 0.14 0.07 0.68 0.68 -0.8 -1.72 -0.04
AKP14354 (WX61_00266)
 0.04 -0.17 -0.04 -0.06 -0.32 0.35 -0.51 -0.25 -0.76 -0.8 -1.92 -0.34 1.34 0.33 0.92 0.17 0.58 -1.91 -0.33 -0.06
AKP14361 (WX61_00273)
 0.4 -0.01 -1.58 -0.22 0.31 0.49 0.02 -0.03 0.03 -2.59 -0.28 -0.23 0.66 0.16 0.3 0.39 0.63 -0.27 -1.89 0.14
AKP14396 (parE)
 0.19 -0.26 -0.78 -0.06 0.06 0.57 -0.22 -0.45 -0.4 -1.32 0.2 -0.5 1.34 -0.11 0.05 0.51 0.66 -0.15 -1.16 -0.99
AKP14405 (folP)
 -0.77 -0.72 -1.69 0.19 -0.78 1.26 -0.15 -0.95 -0.49 -2.77 -1.36 -0.4 0.72 -0.59 1.05 1.02 1.56 -0.94 -1.74 -0.37
AKP14406 (aroF)
 -0.29 0.3 -1.6 0.46 -0.4 0.54 0.11 0.25 0.09 -2.26 -1.71 -0.23 1.09 0.39 0.62 0.42 0.71 -1.27 -1.66 -0.63
AKP14488 (nqrB)
 -0.38 0.09 -2.43 -0.35 0.29 0.86 -0.69 0.08 -0.91 -1.11 0.04 -0.51 0.76 0.03 0.43 0.71 1.05 -0.54 -2.04 0.08
AKP14553 (yflS)
 0.11 0.07 -1.03 0.13 -0.02 0.19 0.19 -0.16 0.4 -0.95 -0.94 0.3 0.38 0.0 0.44 0.08 0.33 -0.79 -1.43 0.69
AKP14555 (speA)
 -0.24 0.16 -0.4 -0.08 -0.32 0.33 -0.29 -0.08 0.0 -0.63 -0.25 -0.25 0.69 0.01 0.05 0.38 0.25 -0.51 -0.89 0.85
AKP14600 (ftsA)
 -0.2 0.23 -1.43 0.59 -0.17 0.4 0.27 0.16 0.36 -0.5 -0.74 0.29 -0.01 -0.06 0.33 0.26 0.6 -0.94 -1.61 -0.05
AKP14614 (ftsL)
 -0.24 0.22 0.13 -0.13 -0.33 -0.32 0.15 -0.06 -0.06 -0.83 -1.29 0.42 1.34 -0.07 0.8 -0.44 -0.16 -0.89 -0.91 0.17
AKP14640 (WX61_00561)
 -1.45 -0.22 0.52 0.57 0.1 -0.91 0.66 -0.07 0.29 -2.16 -2.52 0.32 1.47 0.45 1.18 -1.42 -0.37 -1.98 -0.16 -2.88
AKP14809 (outO)
 -0.24 0.31 -0.22 -0.11 0.33 0.4 -0.24 0.46 -0.5 -0.48 -0.77 -0.16 1.21 -0.46 -0.45 0.39 0.42 -0.91 -0.19 -0.75
AKP14814 (ispB)
 0.69 0.06 -0.81 0.21 -0.34 -0.17 -0.0 0.17 -0.05 -1.29 0.0 0.03 0.84 0.01 0.36 -0.02 -0.43 0.19 -0.81 -0.17
AKP14825 (mepM)
 -0.47 0.19 -1.2 0.27 -0.31 0.78 -0.03 -0.53 -0.12 -1.68 -1.89 -0.15 0.89 0.46 0.78 0.68 0.92 -1.7 -1.18 -0.49
AKP14839 (ffh)
 -0.35 -0.21 -1.26 0.03 0.14 0.73 -0.15 0.0 -0.35 -1.51 -0.54 -0.42 1.03 -0.13 0.65 0.8 0.62 -0.49 -1.31 -0.44
AKP14851 (ygdH)
 -0.37 0.11 -1.71 0.59 -0.61 0.67 0.28 -0.06 0.62 -2.17 -1.21 0.62 0.42 -0.24 0.61 0.77 0.5 -1.35 -1.78 -0.57
AKP14854 (lptD)
 0.29 -0.05 -1.05 -0.1 -0.06 0.58 -0.29 0.1 -0.66 -1.72 -0.16 -0.42 0.91 -0.2 0.64 0.48 0.73 -0.05 -1.24 -0.48
AKP14864 (WX61_00797)
 0.06 -0.01 -1.1 0.14 -0.92 0.85 0.1 -0.21 -0.1 -1.61 -0.3 -0.63 0.12 -0.05 0.69 0.89 0.78 0.07 -1.65 -0.33
AKP14874 (xseB)
 -0.55 0.24 -1.7 -0.61 -0.76 1.1 -0.72 -0.03 -0.75 -0.58 -0.59 -0.53 0.52 0.06 1.21 1.05 1.17 -0.57 -1.82 -2.64
AKP14875 (ispA)
 0.06 0.08 -1.95 0.05 -0.16 0.68 -0.02 -0.07 -0.14 -1.17 -0.46 -0.21 1.23 0.03 0.14 0.77 0.54 -0.37 -2.13 -0.7
AKP14932 (ligA_1)
 -0.48 0.4 -0.78 0.04 0.49 0.51 -0.22 0.38 -0.13 -1.64 -0.1 0.02 0.96 -0.0 -0.32 0.57 0.4 -0.33 -0.72 -2.07
AKP14975 (rsmI_1)
 0.15 0.04 -1.74 0.07 0.24 0.63 0.48 0.29 0.55 -2.26 -1.01 0.24 0.52 -0.2 0.3 0.6 0.68 -1.17 -2.0 -1.08
AKP15013 (prfB)
 0.33 0.08 -0.83 0.15 -0.74 0.36 -0.06 -0.01 -0.06 -0.74 0.06 -0.32 0.58 0.34 0.2 0.42 0.29 0.05 -0.95 -0.43
AKP15051 (yccS)
 -0.07 -0.08 -0.42 0.72 -0.49 0.65 0.68 -0.7 0.3 -1.32 -0.5 0.15 0.37 -0.12 -0.25 0.48 0.87 -0.66 -0.45 -3.1
AKP15174 (WX61_01121)
 0.01 -0.23 -0.82 0.25 -0.23 0.25 0.18 -0.39 1.03 -2.31 -3.97 0.06 1.39 0.49 0.56 0.04 0.52 -2.7 -1.08 -1.01
AKP15182 (rluC)
 0.01 -0.14 -1.82 -0.32 -0.11 0.59 -0.59 0.1 -0.86 -1.8 0.05 -0.58 0.78 0.12 1.16 0.53 0.68 -0.05 -1.78 -0.08
AKP15223 (cysW_1)
 -0.17 -0.12 -1.93 0.31 -0.37 1.07 -0.04 -0.41 0.07 -1.96 -3.96 0.22 0.77 -0.22 0.65 1.05 1.09 -3.62 -1.98 -0.18
AKP15227 (rlmH)
 0.16 -0.62 -1.51 -0.06 0.05 1.12 -0.15 -0.86 -0.17 -2.16 -0.85 -0.09 0.74 -0.39 0.26 1.02 1.26 -0.58 -1.57 -0.7
AKP15252 (mnmE)
 0.52 -0.04 -0.68 0.26 -0.49 0.53 0.16 -0.07 0.22 -1.48 -1.19 0.02 1.03 -0.11 0.52 0.47 0.62 -1.12 -0.68 -2.5
AKP15303 (rsmE)
 -0.28 0.07 -0.28 0.08 -0.1 0.31 0.05 -0.24 0.16 -0.98 -0.96 -0.15 1.49 -0.16 0.37 0.24 0.41 -0.8 -0.59 -1.36
AKP15304 (suhB_2)
 -0.5 0.29 -0.77 -0.05 -0.56 0.51 -0.24 -0.06 -0.13 -1.46 -2.73 -0.37 1.13 0.08 1.34 0.51 0.51 -2.48 -0.81 0.04
AKP15305 (WX61_01256)
 0.07 0.73 -1.57 -0.68 0.87 0.46 -0.37 1.03 -0.42 -1.64 0.34 -0.15 0.87 -0.66 -1.52 0.49 0.42 -0.05 -2.17 -1.53
AKP15325 (dnaN)
 -0.4 0.32 -3.07 -0.11 -0.1 0.62 -0.2 0.35 -0.24 -3.24 -0.02 -0.05 0.35 0.35 0.58 0.56 0.7 0.39 -3.22 -0.2
AKP15340 (fhuE)
 -0.34 0.24 -2.15 0.38 -0.44 0.54 -0.31 0.15 -0.31 -2.46 -2.11 0.04 1.53 0.32 1.28 0.62 0.4 -1.62 -2.1 -2.56
AKP15344 (WX61_01296)
 0.29 0.4 -4.79 0.23 -0.17 0.68 0.15 -0.01 -0.04 -1.93 -0.35 0.07 -0.21 0.46 0.8 0.73 0.6 -0.23 -4.73 -0.86
AKP15356 (hemL)
 -0.37 0.09 -2.44 -0.07 -0.48 0.77 -0.25 0.1 -0.37 -2.74 0.18 -0.58 0.77 0.08 0.77 0.74 0.82 0.33 -2.54 -0.68
AKP15374 (hpaC)
 -0.28 0.33 -0.24 -0.42 0.05 1.0 -0.72 0.42 -0.89 -2.06 -1.93 -0.84 1.57 -0.73 -0.21 0.87 1.18 -2.24 -0.56 -1.61
AKP15375 (rmlA)
 -0.76 0.74 -1.4 -0.07 -0.35 0.92 -0.71 0.75 -0.98 -3.15 -0.79 -0.99 1.14 -0.06 -0.03 0.86 0.99 -0.47 -1.53 -0.49
AKP15379 (oatA_2)
 -0.38 0.33 -1.27 -0.18 0.03 0.97 -0.4 0.59 -0.83 -2.58 -0.8 -0.79 1.36 -0.68 0.48 1.1 0.76 -0.93 -1.47 -2.01
AKP15383 (ileS)
 -0.23 0.22 -1.72 0.42 -0.34 0.57 0.05 0.37 -0.2 -2.07 -0.35 0.07 0.59 0.1 0.35 0.57 0.58 -0.42 -2.09 -0.03
AKP15394 (dnaE)
 0.43 -0.2 -2.04 0.04 0.31 0.64 -0.04 -0.2 -0.43 -2.22 0.23 -0.22 0.67 -0.33 0.62 0.66 0.61 0.14 -2.45 -0.83
AKP15397 (WX61_01350)
 0.14 0.15 -1.05 0.04 -0.25 0.72 -0.14 0.27 -0.12 -2.32 -0.93 -0.4 0.61 -0.09 1.26 0.71 0.74 -0.93 -1.45 -2.17
AKP15428 (qseB)
 -0.36 -0.62 -0.81 0.23 -0.07 0.79 0.02 -0.83 0.21 -2.28 -2.4 -0.3 1.76 -0.72 -0.2 0.65 0.98 -2.19 -1.26 0.23
AKP15526 (ilvI)
 -0.61 -0.01 -1.36 0.44 0.03 0.37 0.17 -0.24 0.2 -1.7 -1.53 0.27 0.89 -0.33 -0.0 0.32 0.43 -1.46 -1.56 1.25
AKP15539 (WX61_01499)
 0.05 -0.13 -0.3 -0.55 0.22 0.8 -0.66 0.2 -0.54 -1.25 -2.72 -0.82 0.54 0.17 1.19 0.65 1.01 -1.63 -1.0 -0.38
AKP15542 (glpR)
 0.11 -0.04 -1.75 0.12 0.05 0.24 -0.13 0.13 -0.23 -2.56 0.22 -0.34 0.99 0.1 0.87 0.21 0.29 0.36 -2.04 -0.82
AKP15574 (ppsR)
 -0.58 -0.31 -0.65 0.59 -0.59 0.71 0.18 -0.77 0.26 -1.73 -2.02 0.41 0.57 0.12 0.56 0.79 0.57 -1.83 -1.02 0.34
AKP15651 (WX61_01613)
 -0.3 0.21 -1.53 0.56 0.09 0.39 0.58 -0.19 0.74 -2.34 -2.33 0.13 1.19 0.31 0.26 0.31 0.5 -2.3 -1.85 -1.15
AKP15679 (pheT)
 -0.64 0.64 -1.02 -0.5 0.17 0.83 -0.58 0.17 -0.52 -0.51 -0.37 -0.87 0.32 0.11 0.48 0.86 0.8 -0.57 -1.22 -0.31
AKP15713 (dapF)
 0.17 -0.11 -1.11 0.05 0.04 0.3 -0.13 -0.27 -0.04 -1.74 -0.7 -0.24 0.94 0.09 1.02 0.28 0.34 -0.75 -1.38 0.31
AKP15720 (mtnN)
 0.08 0.46 -1.45 -0.26 -0.62 0.95 -0.55 0.34 -0.7 -1.83 -0.98 -0.74 0.23 0.38 1.11 0.9 1.03 -0.91 -1.67 -1.15
AKP15758 (ftsH)
 0.11 -0.09 -1.71 0.23 0.07 0.36 0.27 -0.11 -0.04 -0.77 -0.64 0.19 0.55 -0.14 0.1 0.41 0.28 0.28 -1.78 0.28
AKP15780 (WX61_01745)
 -2.2 0.19 -3.36 -1.33 0.54 1.07 -1.55 -0.07 -0.98 -1.17 0.34 -1.17 0.53 -0.27 1.13 1.05 1.11 0.22 -3.96 -0.51
AKP15783 (hsdR_1)
 -0.9 0.09 -2.23 0.35 0.31 0.31 0.22 0.14 0.22 -1.31 -0.22 0.25 0.53 -0.11 0.65 0.27 0.37 -0.3 -2.89 0.2
AKP15801 (WX61_01766)
 0.55 0.15 -1.84 0.09 0.04 0.24 0.07 0.28 0.05 -1.47 -0.33 -0.23 1.13 -0.09 0.76 0.37 0.02 -0.26 -1.9 -1.54
AKP15812 (WX61_01778)
 -0.37 0.13 -0.95 0.36 -0.6 0.79 -0.14 -0.25 -0.21 -1.48 -0.42 -0.43 0.42 -0.39 0.75 0.79 0.78 -0.35 -0.95 -0.09
AKP15835 (intA_1)
 -0.25 -0.13 -1.07 0.53 -0.21 0.6 0.76 -0.42 0.89 -1.92 -2.63 0.4 0.22 -0.93 0.58 0.3 0.96 -2.5 -1.37 -0.02
AKP15872 (WX61_01842)
 0.03 -2.12 -4.75 0.53 -0.61 1.36 0.45 -2.55 0.13 -6.64 -4.19 0.19 1.52 -1.78 0.36 1.08 1.69 -3.2 -5.25 -1.69
AKP15890 (WX61_01860)
 -0.93 -0.01 -0.1 -1.23 0.07 1.02 -1.6 0.03 -1.61 -1.9 -1.39 -1.98 1.45 0.21 0.96 0.87 1.21 -1.22 -0.61 -1.31
AKP15939 (ssb)
 -0.12 0.14 -1.53 -0.37 0.08 0.92 -0.4 0.03 -0.82 -0.64 0.12 -1.09 0.58 -0.04 0.23 0.91 0.93 -0.09 -1.39 -0.65
AKP15981 (virF)
 -0.06 0.38 -2.47 0.22 -0.37 0.57 0.01 0.35 -0.02 -3.29 -2.26 -0.17 0.97 0.43 1.4 0.52 0.64 -2.25 -2.79 -1.46
AKP16021 (WX61_01994)
 0.77 0.01 -1.39 0.26 -0.01 0.37 0.1 0.14 0.17 -1.91 -0.09 -0.1 1.03 -0.2 0.1 0.3 0.47 -0.4 -1.63 -1.72
AKP16030 (metX)
 -0.1 -0.19 -0.7 -0.3 -0.39 0.8 -0.49 -0.27 -0.71 -1.55 -0.02 -0.61 0.57 0.26 0.95 0.86 0.7 -0.12 -1.1 -0.53
AKP16037 (pdhD)
 -0.02 0.4 -1.01 0.03 -0.24 0.81 -0.06 -0.38 -0.34 -1.75 -0.42 -0.7 0.35 -0.21 0.31 0.78 0.85 0.56 -1.21 -0.76
AKP16102 (folB)
 -0.33 -0.8 -0.55 0.36 -0.4 1.0 0.15 -1.41 0.25 -2.69 -3.77 0.14 0.87 -0.94 1.03 0.79 1.28 -3.64 -0.6 -0.72
AKP16131 (accA)
 0.38 0.11 -1.72 -0.05 0.14 0.14 -0.14 0.4 -0.13 -2.52 -0.17 -0.53 1.11 -0.07 1.02 0.1 0.2 -0.12 -2.47 -0.34
AKP16147 (nnr)
 -0.19 -0.22 -1.14 0.47 -0.68 0.57 0.28 -0.35 0.41 -2.09 -0.89 0.18 0.74 -0.17 0.82 0.49 0.69 -0.59 -1.51 -0.43
AKP16166 (hom)
 -0.26 -0.67 -1.81 -0.3 0.01 1.08 -0.22 -0.72 -0.1 -2.42 -0.28 -0.81 1.02 -0.6 0.71 1.02 1.17 -0.26 -2.34 -0.53
AKP16180 (uup_2)
 0.21 0.06 -0.95 -0.06 0.14 0.56 -0.23 0.07 -0.15 -1.42 0.18 -0.22 0.72 -0.27 0.12 0.64 0.43 0.06 -1.4 -0.51
AKP16196 (WX61_02172)
 0.79 -0.47 -0.65 0.05 -0.1 0.34 -0.12 -0.44 -0.09 -1.43 -1.02 -0.42 1.3 0.17 0.26 0.21 0.52 -0.83 -0.86 -0.05

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.