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Heatmap: Cluster_2 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14097 (WX61_00008)
 -1.03 0.31 -0.85 1.43 -0.5 -0.84 -0.41 0.41 0.58 -3.51 -1.89 0.92 0.6 0.52 -0.14 -0.61 -1.27 -2.51 -1.84 1.35
AKP14146 (rbfA)
 0.13 0.2 0.05 -0.18 -0.35 -0.45 -0.38 0.23 -0.4 0.19 0.71 -0.63 0.78 0.54 -1.29 -0.41 -0.52 0.52 -0.56 0.08
AKP14151 (lldD)
 0.09 0.31 -1.67 0.94 -0.19 -0.92 0.93 -0.02 1.0 -2.99 -0.96 0.66 -0.59 0.26 -1.3 -0.92 -0.93 1.13 -1.69 0.16
AKP14173 (dmpP)
 -2.12 0.64 0.09 -0.75 -0.97 0.15 -0.8 0.19 -1.48 -0.97 -3.05 -0.79 0.99 -0.65 0.51 -0.03 0.37 -2.24 -0.46 2.13
AKP14197 (tig)
 0.45 -0.06 -0.62 0.03 0.02 0.48 0.02 -0.12 -0.01 -0.18 -0.77 -0.04 -0.22 -0.16 0.05 0.63 0.23 -0.84 -0.93 0.71
AKP14277 (WX61_00188)
 -1.27 0.05 -3.48 1.34 -0.24 -0.83 0.32 -0.69 0.96 -3.06 -1.71 1.5 0.59 0.74 0.8 -0.91 -0.71 -1.39 -2.99 -0.16
AKP14296 (WX61_00207)
 0.41 -1.94 - 1.42 0.99 - 0.56 -0.99 0.63 - - 1.24 0.84 0.84 - - - - - 2.09
AKP14305 (WX61_00216)
 0.61 1.59 - 0.36 -1.55 0.7 0.29 0.45 0.54 - -6.73 0.64 -0.38 0.23 -2.62 0.37 1.08 -4.8 - 0.08
AKP14341 (norB)
 -1.04 -0.25 -2.72 -0.5 -0.57 0.36 -0.9 0.5 -0.48 -1.39 -0.54 -0.09 -0.02 -0.47 -0.09 0.29 0.45 -0.26 -2.58 2.31
AKP14367 (WX61_00279)
 -0.32 0.34 -0.2 -0.05 -0.18 -0.12 0.09 -0.03 -0.15 -1.03 -1.16 -0.18 1.57 0.54 -0.78 -0.12 -0.11 -0.85 -0.14 0.29
AKP14423 (gdhA_1)
 -1.04 0.36 -1.28 0.78 -0.54 -1.15 0.55 -0.92 0.55 -2.43 0.03 0.61 0.28 0.89 -0.46 -1.53 -0.72 0.32 -1.36 1.26
AKP14426 (glcA)
 -1.36 -0.93 -1.2 -0.7 -0.87 -2.92 -0.93 -1.81 -0.78 0.09 -2.81 -0.99 1.86 0.81 -2.92 -3.52 -2.32 -3.26 1.14 2.62
AKP14441 (blh)
 -0.48 0.41 -1.17 1.03 -1.11 -2.04 0.85 -0.04 1.11 -0.82 -0.28 0.84 0.52 0.66 -2.17 -2.13 -1.9 0.16 -1.81 0.6
AKP14442 (exbD)
 -0.05 1.3 -0.94 0.52 -0.48 -0.91 0.68 -0.24 0.89 -0.26 -2.36 0.56 -0.74 1.02 0.32 -0.97 -0.84 -1.27 -0.42 -1.07
AKP14443 (exbB)
 0.12 0.8 -2.08 0.62 -0.14 -0.17 0.63 -0.78 0.94 -1.49 -2.09 0.52 -0.39 0.88 0.88 -0.26 -0.04 -0.65 -1.91 -1.38
AKP14444 (WX61_00362)
 0.51 0.98 -1.55 0.58 0.02 -0.76 0.6 -0.14 0.85 -0.9 -2.43 0.41 -0.62 0.93 0.89 -0.72 -0.83 -0.9 -1.24 -1.52
AKP14474 (nosZ_1)
 -0.8 0.13 -2.94 0.6 -0.54 0.09 0.22 0.56 0.29 -3.8 -1.9 0.36 0.9 1.27 0.01 0.0 0.21 -1.98 -3.0 0.7
AKP14475 (nosZ_2)
 -0.85 -0.89 -2.35 0.61 -0.35 0.22 0.37 -0.58 0.58 -2.55 0.69 0.6 0.29 0.51 0.43 -0.06 0.56 -0.14 -2.78 -0.02
AKP14479 (gcvH)
 -0.26 -0.39 -1.52 1.03 -0.72 -1.05 0.95 -0.11 0.69 -0.23 -0.93 1.13 -1.06 0.48 -0.94 -1.44 -0.61 -0.57 -1.48 1.29
AKP14643 (WX61_00564)
 -0.72 -1.12 -2.24 0.63 -0.31 -0.73 0.29 -1.06 0.94 -3.25 0.53 1.18 0.14 0.59 1.27 -0.96 -0.44 -0.14 -3.41 0.09
AKP14651 (cysP)
 -0.35 -0.49 -1.98 -1.0 -0.02 -0.71 -1.62 -0.59 -1.32 -0.2 -2.3 -0.75 0.31 2.18 0.91 -1.07 -0.29 -1.12 -1.43 1.73
AKP14696 (WX61_00618)
 1.4 1.41 -4.93 -0.22 -0.26 - 1.92 -0.99 1.64 - - 1.94 -1.38 0.42 - - - - - -
AKP14705 (WX61_00627)
 0.61 1.59 - 0.36 -1.55 0.7 0.29 0.45 0.54 - -6.73 0.64 -0.38 0.23 -2.62 0.37 1.08 -4.8 - 0.08
AKP14761 (glnB)
 -0.28 0.86 -0.68 -0.34 -0.6 -1.26 -0.77 0.05 -0.63 -1.62 -3.83 -0.65 0.89 2.09 -0.04 -1.37 -1.11 -3.44 -0.7 1.56
AKP14801 (gloA)
 -0.12 -0.89 -1.51 0.09 -2.05 -0.77 -0.16 -1.12 -0.18 0.3 -1.47 0.17 0.24 0.95 -0.65 -1.08 -0.4 -0.51 -1.08 2.37
AKP14819 (rpmG)
 - -4.48 -1.35 - - -3.04 - -3.59 - -2.38 - - - -5.08 - -2.92 -3.24 - -1.3 4.21
AKP14827 (WX61_00755)
 -0.17 0.55 -0.8 0.39 -0.34 0.27 0.0 -0.59 0.32 -0.37 -2.21 0.2 0.86 0.63 0.62 0.26 0.29 -1.41 -0.52 -1.65
AKP14893 (WX61_00826)
 0.75 -0.37 -0.69 0.76 -0.6 -1.37 0.44 -0.44 0.75 -0.18 0.14 1.09 0.73 0.52 -1.33 -1.4 -1.32 0.13 -0.93 -1.26
AKP14943 (zapA)
 -0.6 0.65 -1.35 0.99 -1.13 -0.74 0.77 0.43 0.48 -1.07 0.01 0.87 -0.09 0.85 -1.76 -0.89 -0.54 0.07 -1.84 -0.02
AKP15039 (resA_1)
 0.29 0.31 -0.4 1.22 -0.26 -1.77 0.76 0.23 0.49 -0.98 -0.46 0.45 0.29 0.63 -1.72 -2.14 -1.34 -0.1 -0.77 0.3
AKP15049 (WX61_00987)
 -1.01 0.14 -2.01 1.6 -0.02 0.15 -0.81 0.34 -1.04 -1.77 -0.78 -0.04 0.14 -0.11 -0.2 -0.0 0.35 -0.7 -1.97 1.49
AKP15054 (WX61_00992)
 -0.46 0.22 0.08 0.11 -0.39 0.24 -0.25 0.08 -0.38 -0.43 -1.31 0.19 0.3 0.53 0.09 -0.06 0.59 -0.82 0.1 0.3
AKP15061 (WX61_01003)
 -0.47 0.59 -2.23 1.06 0.01 -0.91 -0.13 -0.1 -0.46 -0.9 -2.36 0.86 0.22 1.04 -0.31 -0.96 -0.83 -1.64 -1.69 1.62
AKP15070 (gltS)
 0.07 -0.02 -1.35 0.62 0.29 -0.18 0.17 -0.41 0.11 -1.07 -1.49 0.98 0.76 0.59 0.01 -0.32 0.01 -1.02 -0.79 0.12
AKP15179 (alsT_3)
 0.11 0.52 -2.33 0.26 0.79 -0.52 0.02 0.3 -0.19 -3.22 -1.05 0.32 0.75 0.45 0.21 -0.62 -0.39 -0.85 -2.39 1.21
AKP15196 (ccpA)
 -2.03 -1.12 -3.59 -1.55 -0.73 -0.05 -1.87 -2.51 -1.68 -3.12 0.86 -1.21 -0.95 2.63 1.37 -0.87 0.67 -1.32 -3.81 1.2
AKP15241 (WX61_01192)
 -0.9 0.98 -0.55 -0.13 0.03 -0.33 -1.07 -0.97 -0.95 -0.56 -1.28 0.17 1.14 0.95 -0.34 -0.31 -0.34 -1.42 -0.14 1.36
AKP15257 (WX61_01208)
 -1.38 -1.19 -1.43 -0.7 -1.17 -0.7 -1.45 -1.26 -1.06 0.41 -0.41 -1.09 1.42 0.99 -0.17 -1.24 -0.15 -0.8 0.32 2.21
AKP15318 (yceF)
 0.35 0.19 -0.27 0.25 0.45 -0.28 0.03 0.08 -0.11 -1.04 -3.53 -0.32 1.5 0.7 -0.21 -0.3 -0.26 -2.47 -0.23 0.0
AKP15319 (rsmI_2)
 -0.5 0.33 0.19 -0.12 -0.11 -0.44 -0.33 0.24 -0.44 0.27 -2.58 -0.52 1.06 1.07 -0.19 -0.29 -0.7 -2.08 0.35 0.61
AKP15432 (secB)
 0.59 -0.32 -3.31 1.3 -1.08 -1.87 1.34 -0.35 1.57 -1.35 -1.31 1.29 -0.92 0.89 -1.46 -2.06 -1.63 -0.31 -3.67 -0.62
AKP15456 (fucP)
 -0.52 -0.24 -2.66 0.48 0.11 -0.57 0.31 -0.97 0.75 -1.38 -1.94 0.98 -0.44 0.73 -0.43 -0.73 -0.36 -1.86 -2.66 2.05
AKP15505 (gpmA)
 -0.5 -0.23 -1.95 0.53 -1.21 -0.3 -0.32 -0.61 -0.48 -0.59 0.7 0.35 0.01 1.1 -0.09 -0.61 0.07 0.52 -1.71 1.15
AKP15508 (potF_2)
 0.07 -0.03 -0.66 0.12 -0.37 -0.28 -0.03 0.16 -0.02 0.28 0.47 0.05 0.43 0.17 -0.79 -0.3 -0.27 0.38 -0.65 0.38
AKP15512 (WX61_01466)
 0.12 -1.21 -2.32 1.14 -3.96 -0.17 0.96 0.34 0.88 -3.0 -4.05 0.81 -1.55 1.42 0.24 -0.08 -0.33 -3.39 -2.8 0.96
AKP15514 (pgsA)
 -0.74 -0.16 -0.18 -0.13 0.3 -1.49 -0.36 0.74 -0.53 -2.01 -0.07 -0.4 0.87 1.59 0.15 -1.9 -1.03 -0.49 -0.31 0.86
AKP15527 (ilvH)
 -0.96 -0.12 -1.82 0.05 -0.26 0.68 -0.1 -0.3 -0.28 -2.59 -0.84 0.05 -0.39 -0.63 0.34 0.64 0.74 -0.69 -2.08 1.89
AKP15529 (ilvC)
 -0.61 0.41 -3.26 0.3 -0.26 0.38 0.25 0.07 0.26 -1.78 -0.65 0.2 -0.58 0.51 -0.19 0.31 0.47 -0.74 -3.45 1.46
AKP15546 (WX61_01506)
 -1.25 -0.71 -4.2 -1.04 1.11 -0.51 -1.19 -1.23 -1.39 -1.75 1.39 -1.6 -1.93 2.46 1.06 -0.95 -0.03 -0.59 -4.48 0.01
AKP15578 (potF_3)
 -0.69 0.2 -1.94 0.57 -1.13 -0.41 0.61 0.24 0.53 -1.99 0.72 0.34 0.38 0.12 -1.65 -0.32 -0.55 0.81 -2.21 0.86
AKP15580 (WX61_01540)
 -0.95 -0.12 -1.72 0.27 -0.85 -0.83 0.5 -0.17 0.5 -2.95 0.45 0.41 -0.24 0.67 -0.03 -1.04 -0.55 1.24 -1.96 1.13
AKP15603 (WX61_01564)
 -0.44 -1.66 -0.84 0.07 0.08 -1.96 0.31 -1.6 0.09 -0.41 -4.01 0.3 -3.82 -1.72 0.47 -1.76 -2.32 -4.03 -0.81 3.08
AKP15659 (WX61_01621)
 0.18 0.26 -0.3 0.2 0.23 -0.71 -0.13 0.36 -0.34 -0.52 -1.33 -0.23 1.02 0.53 0.34 -0.7 -0.72 -1.56 -0.21 0.86
AKP15683 (WX61_01646)
 - -0.08 0.23 -0.58 -0.8 0.6 -0.39 0.17 -0.04 0.33 -4.84 -0.67 0.8 0.37 0.16 0.43 0.82 -3.39 -0.4 1.15
AKP15697 (WX61_01662)
 0.93 1.51 0.82 0.1 0.91 -2.06 0.05 0.95 0.36 0.06 -4.46 0.29 -2.06 0.68 -1.56 -1.91 -2.3 -2.8 -0.5 -2.07
AKP15729 (WX61_01694)
 0.64 0.16 -0.49 -0.05 0.68 -0.33 0.06 0.34 0.3 -1.31 -1.2 0.29 0.86 0.57 0.06 -0.3 -0.38 -0.77 -0.47 -1.25
AKP15752 (sdcS)
 -1.03 -0.17 -1.69 -0.18 -0.65 -1.46 -0.52 -0.12 -0.85 -1.6 -0.88 -0.71 1.86 0.6 -1.61 -1.73 -1.13 -1.66 -0.7 2.49
AKP15761 (hemB)
 0.19 0.19 -0.25 0.24 -0.05 0.02 0.04 -0.07 -0.04 -1.61 -3.01 -0.2 0.84 0.81 0.16 -0.17 0.26 -2.56 -0.47 0.85
AKP15856 (WX61_01826)
 0.61 1.59 - 0.36 -1.55 0.7 0.29 0.45 0.54 - -6.73 0.64 -0.38 0.23 -2.62 0.37 1.08 -4.8 - 0.08
AKP15905 (WX61_01875)
 -0.18 -0.58 - 0.1 1.01 -0.15 0.7 0.18 0.16 - - 0.63 -2.19 1.05 1.64 -0.05 -0.3 - - 0.89
AKP15909 (cstA)
 -1.35 -0.6 -2.26 -0.6 -0.36 -0.14 -1.28 -0.74 -1.28 -1.2 -0.79 -1.3 1.59 0.88 0.52 -0.49 0.26 -0.17 -1.05 1.99
AKP15951 (WX61_01923)
 - - - - - - - -1.86 - - - - - - - - - - - 4.3
AKP15983 (ogt)
 0.04 0.35 -0.99 0.15 0.12 -0.74 0.91 0.5 0.91 -1.88 -2.51 -0.41 0.95 0.63 -0.57 -0.87 -0.56 -2.29 -1.54 1.06
AKP15999 (rpiA)
 0.09 -0.11 -1.54 0.39 -0.63 -0.84 0.03 -0.45 0.27 0.18 0.27 0.37 0.92 0.45 -1.08 -0.9 -0.74 0.17 -0.83 1.01
AKP16015 (pip)
 -0.58 -0.52 -1.03 0.56 -0.88 0.13 -0.15 -1.05 0.08 -1.7 -0.01 0.26 0.81 0.62 0.51 0.04 0.27 0.22 -1.44 0.69
AKP16039 (sdhD)
 -0.26 0.12 -2.57 0.78 0.58 -0.96 0.03 -0.21 0.19 -1.97 -0.87 0.81 0.17 0.82 -0.53 -1.2 -0.66 -0.15 -2.36 1.52
AKP16043 (gltA)
 -0.77 0.08 -1.98 0.48 -1.72 -0.67 -0.11 -0.6 -0.2 -2.71 0.36 -0.06 -0.55 0.8 -0.45 -0.88 -0.42 1.37 -1.95 1.86
AKP16096 (WX61_02070)
 -2.72 -0.64 -0.12 -3.29 -1.89 -0.95 -3.47 -1.58 -3.66 1.13 -3.0 -3.29 -1.84 2.72 1.89 -1.45 -0.43 -2.0 0.2 0.49
AKP16113 (argB)
 -0.57 0.55 0.07 0.11 -0.01 -0.64 -0.0 -0.17 -0.03 -2.11 -1.29 -0.58 0.91 0.57 -0.31 -0.74 -0.51 -1.34 -0.38 1.71
AKP16163 (WX61_02139)
 0.55 0.05 0.49 0.15 -0.04 -0.8 0.35 0.25 0.18 0.2 -0.15 -0.27 0.85 0.22 -0.93 -0.98 -0.57 -0.47 -0.35 -0.37
AKP16184 (rpe)
 -0.87 -0.17 -0.26 -0.01 -0.15 -0.54 -1.11 -0.34 -0.95 0.34 -2.39 0.01 1.23 0.08 0.12 -0.65 -0.38 -2.81 0.37 1.84

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.