Heatmap: Cluster_18 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14118 (WX61_00029)
-0.27 0.63 -4.47 1.0 -0.62 0.32 -0.04 0.53 0.34 -6.47 -0.49 0.53 0.51 0.62 -0.68 0.33 0.32 0.43 -4.54 -1.54
AKP14135 (yhjX)
-0.4 1.06 -2.88 -0.81 -0.32 0.39 -0.69 0.55 -0.85 -2.78 0.12 -0.91 -0.35 1.46 0.31 0.39 0.41 -0.13 -3.51 0.6
AKP14136 (xseA)
-0.55 0.53 -1.26 -0.19 -0.09 0.58 -0.57 0.33 -0.38 -2.24 -0.37 -0.52 0.7 0.45 0.58 0.34 0.89 -1.07 -2.09 0.54
AKP14139 (trxA)
-0.74 1.42 -1.42 -0.03 -1.49 -1.59 -0.15 0.77 0.14 -0.46 0.37 -0.29 -1.68 1.22 -1.06 -1.53 -1.69 1.76 -1.92 -0.48
AKP14263 (WX61_00174)
-0.78 1.16 -2.78 1.2 0.64 -1.45 -0.45 0.54 -0.08 -4.47 -0.71 0.97 1.45 0.94 -0.84 -1.45 -1.46 -0.37 -3.51 -1.95
AKP14264 (purM)
0.13 0.64 -0.38 -0.35 -0.04 -0.02 -0.52 0.49 -0.45 -1.37 -0.39 -0.58 0.55 0.9 0.67 -0.07 0.06 -0.3 -0.62 -0.33
AKP14273 (pemK)
-0.41 0.62 -1.67 0.64 -0.09 -0.54 0.21 0.51 -0.03 -3.37 0.38 0.16 0.87 0.91 -0.95 -0.85 -0.17 0.59 -2.09 -0.46
AKP14302 (WX61_00213)
-0.7 1.03 -4.08 -0.96 -1.52 1.04 -0.9 0.19 -1.08 -4.99 -0.5 -1.14 0.26 0.65 0.93 0.43 1.64 0.05 -4.32 -0.35
AKP14308 (prtR_1)
-1.63 -0.68 -3.13 0.52 -3.33 1.42 -2.11 -0.1 -1.93 -5.64 -4.67 0.23 1.0 -0.1 1.33 1.29 1.6 -3.69 -3.68 -0.01
AKP14343 (pkn1)
-0.47 0.49 0.17 -0.08 -0.31 -0.22 -0.76 0.38 -0.27 -2.67 0.18 -0.55 0.32 1.18 0.73 -0.36 -0.04 -0.69 -0.19 0.04
AKP14579 (WX61_00498)
- 1.17 - - - 1.74 - 0.88 - - - - - 0.93 - 1.72 1.77 - - 1.99
AKP14635 (pgmB)
-1.45 1.09 -0.27 0.46 -0.5 -0.35 0.21 0.32 -0.19 -1.14 -0.92 0.13 1.16 0.9 0.41 -0.52 -0.13 -0.7 -0.72 -2.49
AKP14708 (WX61_00630)
-0.7 1.03 -4.08 -0.96 -1.52 1.04 -0.9 0.19 -1.08 -4.99 -0.5 -1.14 0.26 0.65 0.93 0.43 1.64 0.05 -4.32 -0.35
AKP14767 (hslO)
-0.04 -0.76 -2.28 -1.26 -0.38 1.11 -1.02 -0.06 -0.94 -0.66 -1.83 -0.83 0.87 1.06 1.07 0.96 1.31 -0.53 -2.51 -3.0
AKP14769 (WX61_00696)
-0.83 0.96 -1.28 -0.46 -1.05 0.87 -0.6 0.84 -0.15 -3.19 -0.86 -0.79 0.03 0.63 0.99 0.65 1.13 -0.68 -2.4 -1.68
AKP14833 (WX61_00762)
-0.86 0.99 -0.23 -0.17 -0.37 -0.86 -0.57 0.65 0.02 -1.17 -0.04 -0.17 0.78 0.41 -1.7 -0.79 -0.99 0.27 0.13 1.06
AKP14871 (WX61_00804)
- 1.91 - - - 2.4 - 0.08 - - - - - -3.03 - 2.77 1.57 - - -
AKP14899 (lpxC)
-0.36 0.39 -2.5 0.57 -0.8 -1.4 0.19 0.06 0.53 -4.15 0.14 0.56 0.93 0.22 -0.31 -1.43 -1.36 1.64 -3.67 0.26
AKP14929 (ptsH)
-0.72 0.8 -1.84 -0.47 -0.51 0.94 -1.03 0.42 -1.01 -2.38 -0.03 -1.12 0.37 0.8 0.41 0.77 1.16 -0.29 -2.37 -0.44
AKP14931 (hpt)
-0.39 -0.02 -0.76 -0.27 -0.99 1.27 -0.95 -0.03 -0.96 -1.03 -2.85 -0.72 -0.36 0.86 0.78 1.29 1.24 -2.58 -0.83 -0.31
AKP14964 (folD)
0.21 0.37 -1.82 -0.19 -0.06 0.42 -0.3 0.17 -0.36 -1.95 -0.49 -0.21 0.07 1.02 0.47 0.38 0.48 -0.17 -1.79 0.27
AKP15044 (murA)
-0.57 0.28 -1.63 -0.98 -0.12 1.13 -1.31 0.35 -1.47 -1.9 -1.95 -1.33 0.7 0.73 0.82 0.97 1.34 -1.99 -1.63 0.13
AKP15059 (WX61_01001)
- 2.24 -1.98 - -16.47 -19.87 -4.68 1.42 - -2.33 -1.84 -26.59 2.63 2.38 - -19.13 - -1.83 -2.7 -29.64
AKP15083 (WX61_01025)
0.49 1.22 0.36 0.09 -2.3 -1.47 -0.07 0.59 0.21 -0.98 -4.64 0.12 1.49 1.54 -1.74 -1.87 -1.02 -4.37 0.16 -2.61
AKP15084 (WX61_01026)
0.15 0.25 -0.83 0.55 -0.95 -1.62 0.24 0.41 0.12 -1.92 0.89 0.45 0.81 0.09 0.12 -1.75 -1.44 1.18 -0.74 -1.64
AKP15176 (soj)
-0.4 0.24 -0.37 -0.28 -0.47 0.84 -0.63 -0.25 -0.95 -1.16 -1.43 -0.83 0.64 0.69 0.65 0.7 1.03 -1.35 -0.49 0.08
AKP15270 (WX61_01221)
- 2.75 - - - - - -0.02 - - - - - 3.62 - - - - - -
AKP15333 (WX61_01284)
-0.88 0.34 -0.19 -0.39 0.18 0.59 -0.63 0.28 -0.59 -1.39 -1.08 -0.73 -0.38 0.88 0.98 0.28 0.95 -0.55 -0.8 -0.08
AKP15337 (msrC)
-0.41 0.55 -1.73 -0.78 -0.58 1.3 -0.82 -0.04 -1.22 -2.14 -3.12 -1.1 -0.71 1.01 0.93 1.11 1.54 -2.59 -1.88 -0.06
AKP15339 (moeZ)
-2.61 0.79 -3.05 -1.46 -3.05 1.38 -3.0 0.49 -2.99 -2.95 -0.8 -2.5 -0.96 1.46 1.36 1.35 1.42 -1.01 -3.95 -0.45
AKP15377 (fhs)
-0.1 0.47 -2.18 -0.3 -0.14 0.45 -0.36 0.25 -0.55 -2.98 -0.35 -0.73 1.25 0.85 -0.56 0.19 0.77 0.04 -2.47 0.38
AKP15540 (WX61_01500)
-0.57 0.37 -1.85 -0.01 -0.08 0.04 -0.15 0.73 -0.01 -2.33 0.28 0.03 0.76 0.61 0.08 -0.05 0.15 0.92 -2.27 -1.49
AKP15584 (hisA)
-0.39 0.51 -2.21 0.54 -1.12 0.66 0.32 -0.07 0.27 -2.96 -0.7 -0.11 0.53 0.47 -0.43 0.54 0.84 -0.47 -2.38 0.36
AKP15638 (purF)
0.07 0.32 -0.55 -0.75 -0.29 0.31 -0.73 0.29 -0.85 -2.42 -0.21 -1.08 0.55 0.33 0.81 0.18 0.48 -0.07 -1.31 1.06
AKP15722 (dnaX_1)
0.2 0.44 -0.13 -0.23 -0.02 0.3 -0.53 0.29 -0.9 -0.95 -0.43 -0.87 -0.26 0.74 0.61 0.31 0.3 0.02 -0.31 -0.11
AKP15764 (WX61_01729)
0.79 0.65 -1.19 0.18 -0.18 -0.27 0.23 0.32 0.09 -1.55 -1.02 -0.03 0.23 0.83 0.76 -0.1 -0.58 -0.46 -1.87 -0.21
AKP15826 (WX61_01794)
-0.06 0.21 -1.05 -0.95 0.08 1.17 -1.15 0.54 -1.27 -1.74 -2.81 -3.17 -0.57 0.59 0.93 0.93 1.46 -2.8 -1.37 0.51
AKP15859 (WX61_01829)
-0.7 1.03 -4.08 -0.96 -1.52 1.04 -0.9 0.19 -1.08 -4.99 -0.5 -1.14 0.26 0.65 0.93 0.43 1.64 0.05 -4.32 -0.35
AKP16013 (WX61_01986)
-0.04 0.78 -0.93 -0.09 -0.14 -0.54 0.02 0.22 0.16 -1.2 1.04 -0.6 -0.14 0.15 -0.37 -0.63 -0.42 1.16 -1.37 0.0
AKP16034 (metF)
-1.06 0.97 -1.58 -0.77 -0.54 0.36 -0.81 0.49 -0.79 -0.86 1.67 -0.86 0.3 -0.03 -1.08 0.27 0.48 0.8 -2.13 -0.79
AKP16040 (sdhA)
-0.71 0.84 -1.73 0.13 -0.59 0.22 -0.71 0.32 -0.69 -1.82 -0.7 -0.22 0.35 0.8 0.09 -0.04 0.55 -0.17 -1.55 1.26
AKP16041 (sdhB)
-0.92 0.79 -1.57 0.26 -1.21 0.01 -0.49 0.33 -0.43 -1.97 0.28 -0.32 0.45 0.22 -0.58 -0.14 0.22 0.48 -1.75 1.5
AKP16044 (sucA)
-0.34 0.42 -1.87 0.4 -0.95 0.47 0.05 0.01 -0.21 -2.12 0.38 -0.24 0.0 0.28 -0.48 0.19 0.81 0.57 -2.19 0.63
AKP16047 (WX61_02020)
-0.35 1.0 -1.01 -0.6 -0.1 0.8 -0.85 0.53 -0.71 -1.49 -1.78 -1.06 -1.41 0.69 1.59 0.87 0.69 -1.69 -1.32 -0.98
AKP16071 (dld)
-0.91 0.04 -1.86 -0.26 -0.23 0.22 -0.66 0.14 -1.2 -2.42 0.54 -1.19 0.95 0.68 0.22 -0.07 0.57 0.57 -1.96 1.13
AKP16110 (WX61_02084)
0.01 0.49 -0.55 0.02 -0.45 -0.0 -0.21 0.4 -0.1 -0.27 -1.36 -0.25 0.91 0.59 0.6 0.01 -0.02 -0.78 -0.88 -0.05
AKP16200 (ybaB)
-0.28 0.34 -0.83 -0.35 -0.14 0.14 -0.51 0.3 -0.25 -0.47 0.45 -0.73 -0.04 0.92 0.96 0.21 0.04 0.49 -1.21 -1.97

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.