Heatmap: Cluster_9 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
GCGS0457,reduced ceftriaxone suscept
FA1090/H041,60min+PMN
FA1090,L-log,from bact
GCGS1095,reduced ceftriaxone suscept
from N. gon mtr mut mosiac transformant
WT,from L-log cell cultures
from lab,SP319,reduced ceftriaxone suscept
FA1090/H041,0min+PMN
from lab,SP316,reduced ceftriaxone suscept
FA1090cpxR::erm,L-log,from bact
FA1090 GCM77,strain+mut,untreated
GCGS1014,reduced ceftriaxone suscept
from urethra,test for azithromycin resist
FA1090/H041,60min
WT parent,FA19 WT,from p-log cells
WT,FA19,from p-L-log cells
overexp mtrCDE,FA19,from p-L-log cells
FA1090 GCM77,strain+mut,H2O2
FA1090cpxA::kan,L-log,from bact
from p-cells
AKP14099 (WX61_00010)
-0.32 -0.42 -1.21 1.32 -0.26 -1.77 1.08 -0.11 1.0 -4.51 -1.99 1.09 1.47 -0.72 -0.79 -1.55 -2.17 -1.87 -1.87 0.9
AKP14178 (plsC_1)
-0.42 0.04 -1.92 0.76 -0.19 -0.15 0.41 -0.16 0.62 -3.27 -2.0 0.49 1.84 0.18 0.26 -0.21 -0.07 -1.33 -2.35 -0.6
AKP14180 (WX61_00091)
0.13 -0.68 -1.02 0.75 -0.16 0.16 0.45 -1.11 0.71 -2.1 -3.14 0.59 1.57 -0.37 0.71 0.05 0.31 -2.67 -1.55 -0.66
AKP14201 (WX61_00112)
0.65 -0.3 -1.6 0.89 0.48 -1.46 0.83 0.04 0.75 -2.36 -2.19 0.97 1.89 -0.9 -0.33 -1.39 -1.56 -1.86 -1.55 -1.15
AKP14202 (pcs)
-0.0 0.16 -0.64 0.71 -0.12 -0.71 0.39 0.29 0.6 -2.16 -0.02 0.48 1.54 -0.35 -0.55 -0.8 -0.58 0.11 -1.06 -1.94
AKP14203 (WX61_00114)
0.17 0.05 -0.89 0.95 0.05 -0.53 0.61 0.31 0.77 -2.47 -0.85 0.5 1.65 -0.74 -1.18 -0.45 -0.64 -0.72 -0.99 -1.43
AKP14358 (dsbB)
0.46 -0.55 -1.04 1.06 0.3 -1.08 0.96 -0.79 0.91 -2.28 -3.0 0.87 1.64 -0.22 -0.05 -1.27 -0.83 -3.16 -1.58 -0.43
AKP14470 (WX61_00388)
0.08 -0.39 -2.06 1.11 0.31 -0.44 0.66 0.01 0.66 -3.42 -0.72 1.03 1.42 -0.48 -0.66 -0.44 -0.45 -0.58 -2.78 -0.81
AKP14476 (yccM)
-0.31 -0.77 -0.98 0.92 0.3 -1.26 0.61 -0.17 0.84 -2.73 -1.08 0.91 1.26 -0.11 0.38 -1.54 -0.93 -1.33 -1.57 0.71
AKP14497 (cysE)
0.03 -0.22 -2.23 0.97 0.02 -0.21 0.82 0.01 0.9 -2.63 -0.56 0.89 0.94 -0.29 -0.1 -0.24 -0.15 -0.41 -2.82 -1.24
AKP14544 (WX61_00463)
0.05 -0.22 -0.21 0.59 0.22 -1.75 0.7 -0.05 0.73 -2.09 -0.29 0.69 1.83 -1.48 -1.02 -1.6 -2.03 -0.59 -0.92 0.27
AKP14545 (WX61_00464)
0.32 0.01 -1.6 0.79 0.11 -0.95 0.64 0.2 0.66 -2.41 -1.91 0.76 1.52 -0.45 0.1 -0.96 -0.93 -2.05 -1.95 0.52
AKP14589 (ackA_1)
-0.21 -0.25 -0.94 0.93 -0.29 -0.66 0.73 -0.09 0.67 -2.97 -1.7 1.03 1.92 -0.5 -0.26 -0.54 -0.85 -1.16 -1.65 -1.36
AKP14590 (mii)
-0.13 -0.35 -2.25 1.35 -0.27 -1.01 1.04 -0.18 1.23 -4.24 -3.16 1.26 1.59 -0.73 -0.73 -1.03 -0.99 -3.0 -2.27 -0.27
AKP14591 (galD)
-0.75 -0.52 -2.05 1.3 -0.7 -1.25 1.08 -0.13 1.29 -3.09 -2.03 1.37 1.11 -0.6 -1.03 -1.15 -1.42 -1.49 -2.16 0.88
AKP14592 (acnA)
-0.08 -0.83 -2.48 1.31 -0.36 -1.07 1.07 -0.41 1.34 -3.81 -2.12 1.57 1.44 -0.9 -1.43 -1.02 -1.16 -1.63 -3.05 -0.13
AKP14593 (acn)
-0.77 -0.57 -1.67 1.25 0.04 -1.88 1.1 0.02 1.31 -3.55 -3.33 1.23 1.64 -0.07 -1.94 -1.79 -2.02 -2.49 -2.6 0.45
AKP14594 (WX61_00513)
-0.88 -1.03 -1.2 1.19 -0.08 -3.15 1.03 -0.35 1.52 -2.52 -2.4 1.69 1.49 -0.94 -1.67 -3.25 -3.01 -1.9 -1.73 0.54
AKP14595 (prpC)
-0.57 -0.6 -1.1 1.33 -0.18 -2.03 1.25 0.16 0.78 -2.31 -1.66 1.3 0.92 -0.49 -2.07 -2.33 -1.66 -1.69 -1.51 1.23
AKP14597 (prpB)
-0.08 -0.83 -1.43 1.24 0.32 -1.69 1.08 -0.18 1.0 -3.76 -3.3 1.06 1.41 -0.8 -2.13 -1.98 -1.34 -3.64 -1.88 1.31
AKP14636 (malP_1)
-1.3 0.01 -1.81 0.93 -0.08 -0.8 0.72 -0.21 0.7 -2.86 0.16 0.85 1.32 0.22 -0.24 -0.96 -0.6 0.12 -3.42 -0.27
AKP14637 (malP_2)
-0.59 -0.24 -1.95 1.27 -0.06 -0.5 0.85 -0.35 0.59 -2.88 -0.96 0.85 1.33 0.06 0.16 -0.81 -0.14 -0.4 -2.34 -0.96
AKP14641 (WX61_00562)
-0.27 -1.01 -0.53 1.08 0.52 -1.72 0.84 -0.81 0.84 -2.12 -1.57 1.12 1.69 -0.15 0.56 -1.74 -1.69 -1.82 -1.49 -1.4
AKP14642 (WX61_00563)
-0.49 -1.28 -1.83 0.88 0.32 -1.35 0.48 -1.18 1.08 -3.75 -1.59 0.86 1.86 -0.19 1.38 -1.66 -0.98 -1.61 -2.46 -1.01
AKP14646 (thiL)
0.07 0.16 -1.0 0.75 0.22 -0.44 0.7 -0.07 0.7 -2.11 -2.57 0.51 1.49 0.02 -0.17 -0.58 -0.25 -2.26 -1.08 -0.28
AKP14649 (anr)
0.55 0.19 -0.74 0.42 -0.16 -0.34 0.26 0.32 0.29 -1.35 -0.59 0.39 1.08 0.02 -1.06 -0.39 -0.26 0.14 -1.04 -0.1
AKP14733 (WX61_00655)
-0.03 -0.23 -1.19 1.09 -0.19 -1.49 0.76 -0.14 1.11 -1.67 -2.94 1.51 1.72 -0.69 -0.99 -1.6 -1.34 -2.61 -1.76 -0.47
AKP14736 (thiD)
-0.4 -0.25 -0.43 0.72 -0.25 -0.26 0.22 0.05 0.45 -1.92 -0.69 0.23 1.27 -0.08 0.06 -0.43 -0.04 -0.5 -0.85 0.41
AKP14737 (tehB)
-0.77 -0.01 -1.35 0.44 0.28 -0.03 0.08 -0.2 0.66 -2.02 -0.81 0.49 1.47 -0.06 0.18 0.08 -0.19 -0.63 -1.53 -0.06
AKP14763 (WX61_00690)
-0.12 -0.43 -2.15 0.92 -0.44 -0.23 0.73 0.27 0.7 -3.23 -0.57 0.42 1.66 -0.95 0.01 -0.25 -0.2 -0.32 -2.11 -0.76
AKP14984 (WX61_00921)
0.19 -0.57 -0.81 0.81 -0.55 0.38 0.51 -0.82 0.02 -1.76 -1.98 0.38 1.5 -0.96 0.17 0.09 0.73 -1.94 -1.13 0.16
AKP15046 (WX61_00984)
0.5 0.01 -0.82 0.68 0.43 -0.95 0.62 0.46 -0.02 -1.94 -2.5 0.66 2.04 -0.57 -1.34 -1.06 -0.8 -2.25 -0.43 -1.15
AKP15154 (truA)
0.15 0.11 -1.05 0.64 -0.41 -0.4 0.52 0.23 0.58 -1.86 0.1 0.43 1.39 0.17 -1.47 -0.52 -0.25 0.2 -1.43 -1.72
AKP15157 (dadA)
-0.41 -0.16 -2.11 1.45 -0.8 -2.22 1.18 -0.29 1.28 -4.39 -3.51 1.42 1.29 -0.61 -1.48 -2.36 -2.03 -3.07 -2.1 1.03
AKP15158 (alsT_2)
-0.33 -0.18 -2.43 1.29 -0.26 -1.47 1.03 -0.42 1.12 -4.01 -3.0 1.24 1.51 -0.36 -0.51 -1.63 -1.26 -2.65 -2.54 0.64
AKP15199 (rpoN)
0.3 0.29 -0.56 0.87 0.18 -1.12 0.74 0.49 0.64 -1.24 -1.31 0.7 1.37 -0.23 -0.73 -1.14 -1.1 -1.35 -0.88 -1.06
AKP15225 (nadD)
-0.19 -0.52 -3.56 0.52 -0.31 0.49 0.4 -0.54 0.64 -3.8 -0.97 0.91 1.41 -0.56 -0.1 0.32 0.71 -0.91 -3.68 -0.14
AKP15274 (WX61_01225)
0.41 -0.27 -1.73 0.96 0.04 -0.55 0.92 -0.31 0.81 -2.24 -1.59 0.84 1.21 -0.2 0.13 -0.71 -0.34 -1.28 -1.92 -0.42
AKP15420 (ccsA)
-0.0 -0.07 -0.54 0.68 0.35 -0.34 0.53 -0.42 0.41 -0.51 -2.5 0.46 1.23 0.13 0.39 -0.32 -0.36 -1.98 -0.61 -0.57
AKP15429 (rssA_2)
0.28 0.07 -2.52 1.11 -0.39 -0.43 0.99 0.02 0.88 -3.65 -1.87 1.01 0.95 -0.29 0.3 -0.42 -0.44 -1.56 -2.88 -0.39
AKP15444 (WX61_01397)
0.38 -0.95 -0.99 0.61 0.01 0.17 0.42 -1.1 0.49 -1.69 -1.1 0.39 1.44 -0.6 0.23 -0.02 0.42 -1.07 -1.29 -0.02
AKP15448 (WX61_01401)
0.09 0.05 -1.6 0.89 0.49 -1.07 0.69 0.41 0.46 -2.04 -0.06 0.49 1.65 -0.23 -1.58 -1.18 -0.91 0.11 -2.09 -1.68
AKP15450 (queE)
0.27 0.07 -0.93 1.07 0.32 -0.79 0.84 0.51 0.68 -1.21 -1.96 0.82 1.47 -0.45 -1.53 -0.66 -0.99 -1.92 -1.18 -1.6
AKP15472 (WX61_01426)
0.74 0.17 -37.89 0.69 -0.73 -2.26 0.5 0.33 0.99 -22.93 -0.63 1.58 1.99 -0.06 -33.33 -2.33 -2.17 0.16 -17.59 -6.34
AKP15533 (lptF)
0.19 -0.05 -1.78 0.85 0.67 -0.64 0.82 0.39 0.71 -2.2 -1.25 0.73 1.49 -0.36 -0.87 -0.63 -0.67 -1.22 -2.21 -0.97
AKP15557 (trpG)
0.14 -0.44 -1.07 0.62 0.08 0.2 0.4 -0.95 0.5 -2.29 -0.95 0.18 1.16 -0.29 -0.05 0.25 0.12 -0.2 -1.42 0.37
AKP15597 (WX61_01558)
-0.25 -0.31 -2.09 1.03 0.55 -0.56 1.05 0.0 0.74 -1.72 -0.36 0.91 1.34 -0.75 -1.67 -0.53 -0.61 -0.64 -1.99 -0.88
AKP15635 (lbpA_2)
0.15 -0.63 -0.84 0.96 0.52 -0.51 0.69 -0.3 0.75 -1.93 -2.64 0.69 1.75 -1.77 0.24 -0.44 -0.63 -2.73 -1.25 -0.59
AKP15757 (pasT)
0.4 -0.48 -1.07 0.55 -0.02 0.17 0.65 -0.39 0.17 -1.42 -0.78 0.32 1.42 -0.35 -0.08 0.31 -0.08 -0.77 -1.46 -0.48
AKP15863 (rusA_3)
-0.93 -1.46 -1.76 1.33 -0.7 -0.09 0.4 -0.71 0.25 -3.64 -4.78 0.27 2.34 -2.0 0.09 -0.56 0.41 -2.95 -2.4 0.67
AKP15868 (WX61_01838)
0.96 -1.1 -2.31 1.02 0.07 0.29 0.6 -1.83 0.73 -2.97 -2.99 0.51 1.25 -0.59 -0.18 0.38 0.14 -2.14 -2.54 0.29
AKP15911 (gabD)
0.2 -0.73 -0.53 0.81 -0.12 0.05 0.46 -0.65 0.47 -1.71 -1.35 0.22 1.26 -0.12 0.61 -0.12 0.28 -0.97 -0.99 -0.76
AKP15963 (WX61_01935)
-0.64 -0.54 -1.05 1.2 0.32 -1.56 0.75 0.16 0.69 -2.44 -2.67 0.77 2.12 -0.92 0.53 -1.56 -1.56 -2.25 -2.01 -1.27
AKP15965 (WX61_01937)
-0.39 -0.54 -1.12 1.31 0.03 -0.58 0.64 0.52 0.69 -3.34 -3.33 0.65 2.02 -0.85 -0.24 -0.6 -0.55 -3.14 -2.14 -1.19
AKP15967 (WX61_01939)
0.1 -1.47 -0.24 1.24 -1.16 -0.74 0.98 -0.29 1.03 -2.96 -4.76 0.7 1.85 -1.55 0.49 -0.76 -0.72 -4.12 -1.16 -0.64
AKP15995 (lplT)
0.15 -0.32 -0.73 0.83 -0.02 -1.17 0.81 -0.32 1.17 -2.94 -1.85 1.11 1.53 -0.19 -0.87 -1.25 -1.07 -1.5 -1.22 -0.13
AKP15997 (ispD)
0.14 -0.14 -2.61 0.81 0.07 -0.11 0.76 -0.46 1.17 -3.76 -1.45 0.87 1.05 -0.07 0.1 -0.12 -0.08 -1.03 -2.81 -0.79
AKP16073 (WX61_02046)
0.1 0.22 -0.83 0.57 -0.52 -1.32 0.72 0.55 0.52 -2.63 -0.33 0.61 2.16 -1.18 -2.13 -1.35 -1.26 -0.63 -1.58 -0.63
AKP16116 (bacA)
-0.2 0.0 -1.03 1.03 0.18 -0.52 0.75 0.31 0.76 -3.45 -1.41 0.61 1.76 -0.51 -1.38 -0.51 -0.55 -1.54 -1.41 -0.77
AKP16139 (capA)
0.21 0.35 -0.96 0.46 -0.18 -1.02 0.41 0.55 0.65 -2.01 0.12 0.44 1.63 -0.43 -0.99 -0.98 -1.07 -0.11 -1.39 -0.69
AKP16149 (rnr)
-0.05 -0.01 -1.26 0.53 -0.05 -0.37 0.61 0.16 0.75 -2.3 -0.23 0.28 1.12 -0.31 -0.29 -0.3 -0.47 0.06 -1.53 0.15
AKP16182 (WX61_02158)
0.51 0.23 0.08 0.71 0.28 -1.34 0.58 0.24 0.24 -1.47 -1.04 0.22 1.8 -0.46 -0.64 -1.27 -1.45 -0.95 -0.14 -2.58
AKP16218 (WX61_02194)
-0.63 -0.66 -3.63 1.43 0.01 -0.34 0.96 -0.52 0.84 -4.91 -4.11 0.79 2.14 -0.85 -0.03 -0.21 -0.57 -4.15 -4.18 -1.8

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.