Heatmap: Cluster_110 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	AES-1R,ASMDM+	AG1,ciproflaxin	D+7bld	DK2	E01	LB	LB,log	LB,untreated	PA1201	PA14	PA14,0.25xMIC G3KL	PA14,0.25xMIC T7	PA14,0.25xMIC polymyxin-B	PA14,LB	PA14,LB,log	PA14,WT	PA14,ciproflaxin	PA14,cmrA+	PA14,late stat,NaPyruvate+Arabinose	PA14,late stat,untreated	PA14,sutA-KO,late stat,NaPyruvate+Arabinose	PA14,untreated	PA212	PA2596	PA558	PA580	PAK,LB	PAK,WT	PAK,WT,LB	PAK,pilR	PAK,pmrB6,LB	PAO1	PAO1,0.56mg/mL farnesol	PAO1,ABTGC	PAO1,DDS	PAO1,GUN,LB,glucose	PAO1,HapZ,early stat	PAO1,LB	PAO1,LB,glucose	PAO1,LB,untreated	PAO1,M9-CA,early stat	PAO1,M9-CA,log	PAO1,RsmN+	PAO1,SagS,early stat	PAO1,WT	PAO1,WT,BHI	PAO1,WT,LB	PAO1,WT,MOPS acetate	PAO1,WT,MOPS glycerol	PAO1,early stat	PAO1,ersA,BHI	PAO1,lasR rhlR,M9-CA,early stat	PAO1,lasR rhlR,M9-CA,log	PAO1,liquid culture	PAO1,mexZ,LB	PAO1,oxylipin-	PAO1,pBAD-yhjH	PAO1,pUCP18::msr(E)	PAO1,qslA,M9-CA,early stat	PAO1,qslA,M9-CA,log	PAO1,qteE,M9-CA,early stat	PAO1,qteE,M9-CA,log	PAO1,untreated	PAO1,wspFpelApslBCD,LB	PAO1,wspFpelApslBCD,LB,untreated	Y31,LB	Y71,LB	Y82,LB	Y89,LB	ciproflaxin	liquid culture	m pheno	mexT	nirS	pHerdB20T-gp68	untreated
CRN82363 (virS_2)	0.11	-0.51	-0.62	0.97	3.27	0.76	-0.55	-2.83	-0.32	0.06	-0.09	0.14	0.03	-0.28	-0.82	0.66	-1.05	-1.12	0.18	0.81	0.59	-0.24	-1.28	-0.77	0.99	0.54	-1.46	-0.31	-1.03	-0.21	-1.02	0.16	0.2	-0.23	-1.9	-0.53	-0.22	-0.43	-1.17	-0.55	-0.02	-1.39	0.97	-0.3	-1.28	-0.37	-2.15	0.11	1.03	-0.39	-0.42	-0.83	-1.5	-0.43	-1.8	-3.66	0.09	-0.18	0.01	-1.72	0.14	-1.59	-0.68	-1.16	-0.75	-0.3	0.68	-0.43	0.27	-0.62	-0.86	0.38	-1.16	-1.59	2.21	-1.87
CRO11876 (ada_2)	0.27	-0.38	-0.15	1.18	3.18	0.15	-0.31	-1.48	0.48	0.11	-0.4	-0.49	-0.51	-0.61	-1.22	0.27	-1.55	-2.3	0.41	-0.2	1.45	-0.72	-0.11	0.19	0.21	0.33	-1.42	0.56	-1.62	1.65	-0.91	0.16	0.78	-1.21	-1.91	-0.22	-1.22	-0.83	-1.06	-1.73	0.92	-1.66	1.12	-1.33	-1.71	-0.39	-2.37	-0.5	0.22	-1.33	-0.96	0.26	-1.92	-1.75	-2.75	-7.04	-0.76	-1.3	1.21	-1.58	1.02	-1.74	-1.83	-2.16	-1.25	-1.01	0.8	-0.33	-0.07	-1.01	-0.59	0.42	-2.12	-0.93	2.28	-1.77

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.