Heatmap: Cluster_24 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
AES-1R,ASMDM+
AG1,ciproflaxin
D+7bld
DK2
E01
LB
LB,log
LB,untreated
PA1201
PA14
PA14,0.25xMIC G3KL
PA14,0.25xMIC T7
PA14,0.25xMIC polymyxin-B
PA14,LB
PA14,LB,log
PA14,WT
PA14,ciproflaxin
PA14,cmrA+
PA14,late stat,NaPyruvate+Arabinose
PA14,late stat,untreated
PA14,sutA-KO,late stat,NaPyruvate+Arabinose
PA14,untreated
PA212
PA2596
PA558
PA580
PAK,LB
PAK,WT
PAK,WT,LB
PAK,pilR
PAK,pmrB6,LB
PAO1
PAO1,0.56mg/mL farnesol
PAO1,ABTGC
PAO1,DDS
PAO1,GUN,LB,glucose
PAO1,HapZ,early stat
PAO1,LB
PAO1,LB,glucose
PAO1,LB,untreated
PAO1,M9-CA,early stat
PAO1,M9-CA,log
PAO1,RsmN+
PAO1,SagS,early stat
PAO1,WT
PAO1,WT,BHI
PAO1,WT,LB
PAO1,WT,MOPS acetate
PAO1,WT,MOPS glycerol
PAO1,early stat
PAO1,ersA,BHI
PAO1,lasR rhlR,M9-CA,early stat
PAO1,lasR rhlR,M9-CA,log
PAO1,liquid culture
PAO1,mexZ,LB
PAO1,oxylipin-
PAO1,pBAD-yhjH
PAO1,pUCP18::msr(E)
PAO1,qslA,M9-CA,early stat
PAO1,qslA,M9-CA,log
PAO1,qteE,M9-CA,early stat
PAO1,qteE,M9-CA,log
PAO1,untreated
PAO1,wspFpelApslBCD,LB
PAO1,wspFpelApslBCD,LB,untreated
Y31,LB
Y71,LB
Y82,LB
Y89,LB
ciproflaxin
liquid culture
m pheno
mexT
nirS
pHerdB20T-gp68
untreated
CRN71135 (argT_1)
-0.51 -0.44 -0.8 -0.51 -1.49 0.41 1.23 0.61 -0.79 -0.23 -0.33 -0.35 -0.28 0.32 1.74 -0.28 -0.2 0.05 -0.62 -1.25 -0.84 -0.06 -1.99 -0.37 -0.25 0.14 -0.38 -0.74 -0.52 -1.47 -0.17 -0.4 -1.18 -0.18 -1.39 -0.45 -1.95 -0.41 1.0 2.3 0.49 0.04 0.02 -1.8 -0.59 0.56 -0.04 0.18 0.36 -1.85 0.64 0.68 0.02 -0.49 0.05 0.73 -0.45 -0.53 -0.04 -0.0 0.27 0.02 -0.74 -1.67 -1.72 -0.57 -0.28 -0.41 -0.58 -0.39 0.68 0.54 -0.05 0.89 -0.36 1.19
CRN71163 (hisQ_1)
-0.23 -0.67 -0.28 -0.19 -0.54 -0.37 0.24 -1.2 -1.39 0.65 0.22 0.18 0.17 0.25 1.11 0.11 0.27 0.82 0.21 -0.63 0.13 0.02 -1.42 -0.8 -0.01 0.28 0.38 -1.18 -0.61 -1.99 0.54 -0.34 -0.42 -0.67 -1.14 -1.0 0.64 -0.0 -0.68 0.26 0.59 1.13 -0.41 0.66 -0.57 -0.51 0.33 -0.6 -0.07 0.59 0.09 0.25 1.01 -0.2 0.53 -0.47 -0.2 -0.99 -0.21 1.03 0.12 1.15 -0.78 -1.98 -1.41 -0.14 0.43 0.04 -0.03 0.21 -0.35 -0.23 0.6 -1.67 -0.45 -0.27
CRN71190 (occM_1)
-0.31 -0.72 -0.17 0.12 -0.5 -0.22 0.27 -1.23 -0.81 0.34 -0.12 -0.07 -0.1 0.25 0.85 0.02 -0.09 0.59 0.41 -0.84 0.44 -0.27 -1.19 -1.37 0.41 0.62 0.13 -1.17 -0.29 -1.24 0.3 -0.23 -0.71 -0.76 -1.38 -0.66 0.47 0.28 -0.32 0.59 0.21 1.22 0.16 0.46 -0.64 -0.21 0.2 -0.82 -0.35 0.42 0.43 0.48 1.24 -0.08 0.34 -1.48 -0.29 -0.64 -0.03 1.09 0.43 1.09 -0.41 -1.72 -1.25 -0.07 -0.06 -0.09 -0.41 0.49 -0.07 0.09 0.52 -1.6 -0.63 -0.62
-0.42 -0.46 0.35 0.47 0.31 0.34 -0.3 -1.38 -1.12 0.2 0.08 0.21 0.12 -0.53 0.99 0.52 0.1 0.47 0.61 -0.43 0.56 -0.03 -0.67 -1.4 1.56 1.69 -0.46 -1.05 0.02 -1.72 -0.29 0.16 0.42 -0.75 -0.6 -1.51 0.41 -0.85 -0.44 0.64 -2.0 -1.19 -0.1 0.58 -1.49 1.28 0.59 -0.35 0.06 0.24 1.67 -1.97 -1.19 0.81 0.61 -3.02 0.23 -1.24 -1.84 -1.41 -1.8 -1.16 -0.99 -2.21 -1.78 0.13 0.07 -0.1 -0.17 0.14 -0.04 0.48 0.48 -0.2 0.48 -1.28
CRN71228 (hisP_1)
-0.46 -0.62 0.0 0.22 -0.36 0.88 0.54 -0.72 -0.81 0.4 0.24 0.26 0.29 0.6 1.99 0.58 -0.0 0.4 0.32 -0.92 -0.03 0.11 -1.22 -1.07 1.35 1.34 -0.01 -1.79 0.44 -2.18 -0.07 -0.03 -0.24 -0.53 -1.6 -0.77 0.24 -0.72 0.56 0.88 -1.77 -0.66 0.09 0.54 -1.51 0.85 0.06 -0.25 -0.26 0.27 0.99 -1.59 -0.43 0.66 -0.04 -1.38 0.26 -1.15 -1.43 -0.6 -1.62 -0.54 -0.83 -2.01 -1.55 -0.49 -0.88 -0.61 -0.84 -0.04 0.73 0.48 0.38 -0.17 -0.22 -0.16
CRN71252 (cdhR_1)
0.35 -0.27 0.18 0.1 0.04 0.58 0.12 -0.74 -0.52 0.21 0.27 0.31 0.35 0.21 0.74 0.19 -0.12 0.33 0.57 -0.14 0.61 0.18 -0.86 -0.44 0.85 0.71 -0.35 -0.26 0.11 0.06 -0.39 -0.01 -0.26 -0.2 -2.06 -0.27 -0.08 -0.63 0.13 0.75 -0.88 -0.29 -0.32 0.17 -0.51 0.47 0.13 -0.42 -0.39 -0.1 0.46 -0.87 -0.43 0.83 0.21 0.02 0.28 -0.47 -0.61 -0.42 -0.45 -0.39 -0.57 -1.5 -1.34 0.44 -0.03 0.07 -0.04 -0.13 0.6 0.47 0.24 -0.74 0.15 -0.95
CRN71295 (aruC)
-0.73 -0.68 -0.0 -1.24 -1.52 1.03 0.7 0.07 -0.43 0.31 -0.14 -0.06 -0.19 0.96 1.53 -0.15 0.56 0.05 -0.59 -1.69 -0.74 -0.36 -1.74 -1.49 0.69 0.9 -0.93 -0.57 0.55 -1.35 -0.69 -0.03 -1.62 -0.88 -1.33 -1.14 1.18 -0.8 0.28 1.31 -2.02 -1.16 0.72 1.39 -1.71 1.44 -1.14 -0.78 -0.62 1.24 1.62 -1.63 -0.97 0.95 -1.05 -2.12 -1.3 -1.85 -2.58 -1.0 -1.71 -1.21 -0.66 -3.29 -2.31 0.21 0.05 0.12 0.23 -0.13 1.36 1.17 -0.06 0.0 -0.15 0.37
CRN71323 (astA)
-0.12 -0.5 0.65 -1.6 -0.94 1.22 0.86 -0.5 -0.28 0.39 -0.45 -0.33 -0.47 0.22 1.09 -0.67 0.39 0.4 -0.93 -1.9 -0.96 -0.62 -1.75 -1.31 0.76 0.7 -0.37 -0.6 0.55 -1.17 -0.12 -0.07 -1.27 -1.06 -1.63 -1.27 0.69 -0.15 -0.43 0.75 -1.92 -0.68 0.37 0.86 -1.28 2.29 -0.35 -1.43 -0.68 0.9 2.25 -1.58 -0.83 0.92 -0.37 -1.93 -1.21 -2.33 -2.31 -0.88 -1.62 -0.76 -0.85 -3.45 -2.25 0.05 0.15 0.13 0.36 -0.19 1.21 1.18 0.19 -0.8 -0.48 0.43
CRN71352 (aruG)
-0.16 -0.83 0.35 -1.87 -0.97 0.66 0.35 -0.56 -0.46 0.39 -0.49 -0.36 -0.56 0.73 1.26 -0.85 1.13 0.19 -1.18 -2.34 -0.99 -0.64 -2.17 -1.01 0.55 0.53 -0.94 -1.11 0.4 -1.15 -0.63 -0.32 -1.67 -1.5 -1.78 -1.45 0.2 0.11 0.11 1.32 -0.57 1.28 0.21 0.34 -1.79 1.92 -1.17 -1.95 -1.23 0.32 1.44 -0.19 1.19 0.48 -1.06 -1.74 -1.46 -2.86 -0.84 1.18 0.17 1.1 -1.33 -4.42 -3.0 -0.08 -0.04 -0.1 0.15 -0.6 1.55 1.05 0.01 -1.2 -0.36 0.11
CRN71377 (astD)
0.29 -0.75 0.65 -0.62 0.33 -0.09 -0.16 -1.89 -0.4 0.47 -0.12 -0.1 -0.18 0.01 0.62 -0.27 2.02 0.6 -0.66 -1.9 -0.48 -0.57 -2.08 -0.09 1.45 1.28 -0.61 -0.68 0.79 -0.92 -0.18 -0.01 -1.63 -1.02 -1.26 -2.14 0.48 -0.16 -1.23 -0.1 -2.46 -0.46 1.02 0.7 -1.41 1.15 -1.16 -0.85 -0.22 0.7 0.63 -2.23 -0.61 1.61 -1.09 -2.28 -0.64 -2.92 -2.77 -0.58 -1.65 -0.55 -0.97 -4.2 -3.14 0.45 0.35 0.35 0.46 -0.52 0.56 2.01 0.4 -0.22 0.54 -1.15
CRN71404 (astB)
0.4 -0.56 0.56 -0.0 -0.79 0.4 0.26 -0.82 0.28 0.53 -0.09 -0.08 -0.13 0.94 0.96 -0.43 0.82 0.06 -0.28 -1.52 -0.46 -0.43 -1.21 0.49 0.63 0.19 -0.45 -0.34 0.65 -0.06 -0.12 -0.04 -1.75 -0.61 -1.96 -0.94 0.78 -0.37 0.1 0.59 -2.16 -0.75 1.23 0.87 -0.64 0.75 -0.87 -0.75 -0.19 0.92 0.19 -2.1 -0.75 1.18 -0.84 -2.21 -1.2 -1.03 -2.26 -0.79 -1.39 -0.74 -0.23 -1.63 -0.82 0.16 0.01 0.03 0.11 -0.89 1.23 1.67 -0.13 0.09 -0.09 0.22
CRN72841 (tlpA)
0.17 -1.29 -0.61 0.14 0.62 0.72 0.09 -0.03 -0.52 0.14 0.05 0.23 0.26 0.79 -0.3 0.0 -1.99 -0.14 0.55 1.09 0.49 0.1 -1.38 0.07 0.99 1.03 0.96 0.43 -0.49 0.78 1.37 -0.02 -0.77 0.04 -1.41 -0.02 -1.85 -0.8 -0.72 0.06 -1.05 -2.15 -0.81 -2.31 -0.22 0.38 -0.5 1.16 0.82 -1.9 1.03 -1.02 -2.13 0.08 -0.55 -3.3 0.51 -0.21 -0.98 -2.07 -1.18 -2.23 -0.59 -1.03 -0.78 0.6 0.88 0.56 0.45 0.17 0.12 0.02 -0.15 -0.93 -0.29 -0.1
CRN72866 (acyP)
0.27 -3.11 -1.55 -0.22 1.37 1.45 0.82 0.37 0.17 0.18 0.25 0.49 0.14 0.48 0.45 -0.23 -2.44 -0.87 0.72 1.38 0.57 0.01 -2.64 -0.29 -0.26 -0.4 0.47 0.63 -1.01 1.69 0.87 -0.05 -1.51 -0.41 -2.83 1.18 -1.26 -1.31 0.79 0.47 -1.17 -1.58 -0.3 -1.26 0.18 0.07 -0.3 0.5 0.47 -0.8 0.29 -1.21 -2.36 -0.04 -0.85 -7.97 0.26 -0.2 -1.47 -2.19 -1.63 -1.98 -0.14 -1.56 -1.22 0.27 0.22 0.16 -0.09 0.63 0.67 0.34 -1.15 -0.75 -0.15 0.29
-0.77 1.13 0.68 -1.14 0.55 2.08 0.94 0.52 1.05 0.82 -0.58 -0.38 -0.6 -0.56 -0.12 -1.32 -0.9 -0.84 -1.36 -0.23 -0.81 -0.26 -0.73 1.15 0.86 1.49 -2.02 -0.89 -2.23 -0.76 -1.86 0.41 2.33 -0.82 -0.64 -0.23 -2.76 -0.5 -0.3 -0.27 -1.25 -0.66 1.7 -3.18 0.62 0.8 -2.23 -2.01 -1.69 -2.99 0.87 -1.33 -0.82 0.25 -1.95 -2.85 -0.32 -2.91 -1.57 -0.94 -1.41 -0.96 -1.39 -2.93 -2.94 -0.33 -0.87 -0.52 -1.42 -0.53 -0.25 2.13 -0.97 -1.43 1.13 1.31
-1.13 1.14 0.92 -2.5 -0.17 2.4 0.92 1.62 2.54 -0.11 -1.47 -1.29 -1.52 -1.46 -1.1 -3.06 -1.02 -1.78 -2.96 -2.36 -2.52 -0.97 -1.46 -0.55 0.88 1.73 -3.36 -2.46 -2.91 -1.98 -3.37 0.37 1.97 -0.69 -0.12 -3.65 -5.08 -1.32 -0.95 -1.76 -3.43 -0.72 1.96 -4.75 1.7 1.49 -4.07 -3.41 -2.91 -5.44 1.57 -3.47 -0.7 1.46 -4.05 -6.73 -0.27 -5.03 -3.75 -0.74 -4.15 -0.94 -1.26 -6.53 -5.32 0.32 -1.25 -1.06 -1.97 0.4 -0.23 2.12 -2.13 -2.49 0.75 1.78
CRN81910 (nanT)
-1.16 0.14 0.8 -2.8 -1.26 2.09 0.98 1.62 1.2 -0.87 -2.62 -2.35 -2.39 -0.75 -0.9 -5.59 -0.57 -2.72 -5.18 -4.8 -4.68 -2.01 -1.43 -2.19 -0.46 0.59 -3.68 -0.23 -2.05 -0.92 -3.81 -0.09 1.16 -1.3 -0.52 -2.23 -1.61 -0.47 0.56 0.45 -3.09 1.95 1.6 -1.59 2.7 -0.29 -3.67 -4.47 -3.8 -1.78 -0.36 -2.55 1.93 1.66 -3.64 -3.81 -1.05 -3.53 -3.21 1.78 -3.22 1.41 -1.4 -4.61 -3.72 0.56 -1.01 -1.0 -1.53 0.39 0.72 1.5 -3.09 -1.85 0.22 1.77
CRN81938 (nicP_2)
-0.2 0.5 1.59 -2.85 1.15 2.29 0.64 0.38 0.39 -0.6 -1.8 -1.56 -1.64 -0.87 -0.23 -3.73 -0.64 -1.7 -2.48 -2.6 -2.11 -1.36 -0.84 -2.42 0.5 1.39 -3.3 -0.48 -1.9 -0.99 -3.53 0.24 1.24 -0.75 -1.5 -2.53 -2.71 -0.15 0.65 1.46 -4.09 0.63 0.73 -2.94 2.54 1.7 -3.59 -4.17 -3.92 -2.89 1.45 -3.87 0.77 2.0 -2.71 -5.53 -0.62 -4.36 -4.06 0.61 -4.39 0.32 -1.83 -5.6 -4.73 0.65 -5.11 -0.75 -5.13 -0.6 0.51 1.97 -2.21 -1.22 0.66 0.96
-1.25 0.2 1.54 -3.2 0.24 3.16 0.21 -0.4 -0.52 -0.81 -2.14 -1.96 -2.0 -1.47 -0.42 -4.0 -0.11 -2.45 -4.05 -3.46 -3.53 -1.7 -0.94 -3.08 0.69 1.91 -4.17 -1.13 -2.59 -1.21 -4.64 0.15 1.75 -0.5 -1.26 -2.65 -5.26 0.66 1.05 1.16 -3.33 1.47 0.26 -5.48 -0.15 0.57 -5.25 -3.79 -3.79 -5.61 -0.04 -2.87 1.33 2.76 -4.76 -7.46 -0.46 -5.75 -3.34 1.36 -3.55 0.89 -3.26 -8.25 -7.33 0.78 -1.58 -0.95 -1.54 -0.6 1.28 1.99 -2.8 -2.09 1.1 -0.54
CRN81998 (kipI_1)
-0.91 3.05 2.29 -3.4 -0.27 1.83 -0.56 -1.54 0.81 -1.19 -2.26 -2.15 -2.0 -2.51 -2.06 -5.24 -0.65 -2.17 -5.3 -6.47 -4.52 -2.15 -1.61 -3.25 -0.06 1.76 -4.29 -1.15 -2.54 -1.77 -4.19 0.66 3.09 0.35 -0.59 -4.07 -5.38 -0.31 -0.42 -0.41 -4.4 -0.57 1.22 -5.83 -0.42 1.05 -4.99 -4.1 -4.32 -5.16 0.21 -4.29 -0.61 2.77 -4.42 -4.46 -0.17 -2.58 -4.99 -0.61 -4.03 -0.96 -2.0 -6.06 -6.16 0.39 -1.61 -0.98 -1.49 -1.39 0.41 2.87 -2.56 -0.89 1.09 -1.72
CRN82021 (kipA_1)
-0.61 1.23 1.88 -1.72 0.11 1.85 -0.57 -3.08 0.39 -0.32 -1.32 -1.15 -1.11 -2.33 -1.98 -3.59 -1.77 -1.66 -3.6 -4.22 -2.79 -1.49 -0.31 -1.5 1.57 2.39 -3.04 -0.34 -1.78 -0.9 -3.3 0.64 2.8 0.1 -0.91 -5.62 -3.95 0.13 -1.3 -1.21 -3.56 0.79 0.8 -4.65 -1.13 0.34 -4.97 -3.72 -3.12 -4.6 -0.56 -3.32 0.51 2.88 -7.81 -9.17 0.06 -5.48 -3.68 0.65 -3.55 0.38 -2.59 -6.22 -5.49 1.14 -1.28 -0.5 -1.22 -1.0 0.39 2.59 -2.18 -3.61 1.8 -2.78
0.02 0.01 1.14 -0.11 2.13 2.46 0.42 -0.62 1.02 -0.02 -1.27 -1.02 -1.05 -0.74 -0.09 -1.41 -0.76 -1.78 -1.95 -1.95 -1.81 -0.99 -0.43 0.91 0.38 1.05 -2.06 -0.25 -1.91 0.01 -1.47 0.12 0.88 -0.75 -1.69 -1.89 -0.69 -0.12 1.29 1.02 -5.01 -0.9 0.79 -1.28 1.9 0.87 -2.51 -3.26 -1.9 -1.02 0.46 -4.3 -0.9 1.86 -2.56 -4.72 0.22 -2.02 -4.59 -1.23 -3.88 -1.3 -1.28 -3.85 -2.14 1.03 -0.48 -0.3 -1.03 -1.74 0.22 1.55 -1.96 -0.41 1.49 0.31
CRN86448 (rbsK)
-0.11 0.5 0.01 0.95 0.09 0.6 -1.31 -1.24 0.06 -0.41 -0.32 -0.27 -0.02 0.09 0.48 0.0 -0.71 -2.29 0.1 -0.24 0.34 -0.55 0.06 - 1.4 1.18 0.65 1.01 0.5 1.09 1.14 0.48 1.83 -0.58 -1.34 -0.82 0.33 -0.68 -1.82 -2.23 -1.01 -3.04 -0.01 0.18 -0.92 2.06 -1.29 -0.59 -0.07 0.33 0.99 -1.56 -2.81 0.04 -1.25 -4.61 -0.33 -0.56 -0.88 -2.8 -1.32 -2.61 -0.82 -0.78 -0.94 -0.04 -0.47 -0.4 -0.58 -2.85 -0.31 1.61 -2.21 0.61 1.23 -2.08
CRN86478 (rbsR)
0.39 0.24 0.0 -0.38 0.56 0.09 -1.25 -1.29 -1.4 -0.31 -0.3 -0.26 -0.02 0.49 0.3 -0.37 0.4 -1.98 -0.42 -0.65 -0.22 -0.57 -1.36 - 1.36 1.11 1.31 1.34 0.85 1.44 1.77 -0.08 1.01 -1.02 -2.33 -1.05 -0.97 -0.37 -1.71 -1.27 -0.25 -0.98 -0.42 -1.21 -1.38 2.36 -1.94 -0.8 -0.38 -0.87 1.32 -0.83 -0.86 0.03 -1.86 -4.65 -0.88 -1.12 -0.11 -0.83 -0.47 -0.62 -1.58 -1.34 -1.83 -0.02 0.12 -0.45 -0.05 -1.83 -0.26 1.44 -1.92 1.12 1.15 -2.3
CRN86499 (rbsC)
0.41 -0.36 0.24 -1.07 0.75 0.17 -1.2 -1.48 -1.51 -0.17 -0.45 -0.39 -0.4 1.42 0.64 -1.61 0.5 -2.59 -0.73 -0.7 -0.53 -0.77 -1.82 - 1.04 0.96 1.74 1.98 1.12 1.74 2.12 -0.13 -0.08 -1.49 -2.26 -0.26 -0.84 -0.64 -1.68 -1.65 -2.18 -3.03 -0.64 -0.96 -0.88 2.32 -0.59 -1.04 -0.75 -0.76 1.74 -2.82 -2.61 0.12 -0.5 -5.9 -1.51 -0.89 -1.59 -2.78 -1.93 -2.43 -1.07 -1.15 -1.85 -0.25 0.16 -0.33 -0.17 -2.46 0.38 1.65 -2.36 0.42 1.07 -1.84
CRN86529 (araG)
-0.1 0.12 -0.2 -1.1 1.11 0.31 -0.85 -1.75 -1.38 0.25 -0.21 -0.37 -0.33 1.33 0.9 -1.69 0.63 -3.23 -0.83 -3.03 -0.64 -0.86 -1.8 - 1.77 1.49 1.27 2.02 1.14 1.82 1.8 -0.07 1.12 -2.1 -2.61 -0.96 -1.59 -0.7 -2.5 -1.93 -1.22 -1.81 -0.81 -1.86 -1.62 2.3 -2.92 -1.81 -1.04 -1.53 1.77 -1.58 -1.83 0.18 -2.75 -5.22 -2.47 -2.13 -0.05 -1.94 -0.74 -1.44 -2.21 -2.66 -3.32 -0.65 -0.03 -0.67 -0.66 -3.04 0.42 1.74 -3.09 0.21 1.55 -2.29
CRN86559 (rbsB)
-0.53 0.13 -0.08 -2.24 -0.91 1.13 0.41 -0.43 -0.6 0.44 -0.04 -0.24 -0.48 1.92 1.29 -2.23 0.9 -3.44 -1.52 -2.29 -1.41 -0.68 -1.1 - 0.5 0.62 1.72 1.93 1.69 1.45 2.41 -0.27 1.15 -1.81 -0.75 -0.92 -1.53 -1.44 -2.5 -2.56 -5.69 -5.45 -0.03 -1.78 -0.7 2.18 -2.12 -2.21 -1.5 -1.41 2.1 -5.78 -5.45 0.09 -2.1 -4.43 -2.5 -2.06 -4.14 -5.62 -5.01 -5.16 -1.4 -2.12 -2.89 0.15 0.04 -0.25 0.14 -2.02 0.56 0.66 -3.24 0.99 0.77 -0.56
0.3 0.27 0.84 0.07 -0.5 -1.18 -1.12 -0.84 1.23 -0.31 -0.0 0.12 0.19 -2.92 -1.97 -0.18 -0.82 -1.45 1.22 0.48 1.39 0.21 1.4 0.86 1.16 0.93 -0.43 0.24 -0.96 0.14 -0.04 0.13 1.19 0.56 0.96 -1.27 -0.47 -0.38 -1.99 -2.02 -0.17 -2.16 1.44 -0.2 -0.4 -0.84 -2.1 -0.16 0.36 -0.4 -0.19 -0.72 -1.97 -0.17 -2.08 -1.69 -0.01 -0.21 0.1 -1.68 0.33 -1.59 -0.44 -0.65 0.12 1.07 0.32 -0.05 0.35 -0.13 -1.62 -0.91 -1.3 -0.01 0.48 -1.32
-0.16 0.5 0.24 0.84 -0.07 -0.08 -0.1 -1.75 -0.28 -1.26 -0.93 -0.86 -1.03 -2.37 -0.42 -1.05 -4.56 -1.74 -0.56 0.37 -0.41 -1.5 -0.61 -1.55 1.25 1.37 1.05 -0.01 -0.17 -0.12 0.99 0.68 1.03 -1.32 -0.08 -0.57 0.74 -0.04 -1.33 -1.3 -0.5 -0.57 0.82 0.57 -0.16 -0.69 -0.15 -0.12 0.23 1.0 -0.74 -0.48 -0.85 -0.65 -0.56 -7.66 0.9 -0.31 -0.81 -0.76 -0.88 -0.51 -0.49 -1.24 -0.15 -0.35 1.96 1.18 1.45 0.29 -2.24 -0.26 -1.5 1.4 0.27 -1.23
0.37 -0.51 0.26 -0.65 -0.56 0.21 -0.44 -1.84 -0.14 0.22 0.43 0.45 0.54 -0.93 -0.23 1.46 -0.88 -1.56 0.73 -0.32 0.53 0.39 -1.63 0.02 1.42 1.51 -0.38 0.35 -0.33 0.47 -0.22 -0.06 -0.42 0.61 -1.52 -1.61 -1.04 0.54 -1.86 -2.49 0.53 -0.85 0.02 -0.75 -0.17 -0.21 -0.56 0.25 -0.06 -0.76 -0.13 0.11 -0.64 0.64 -0.32 -4.15 0.6 -0.71 0.75 -0.77 0.65 -0.61 -0.52 -2.06 -1.45 1.33 0.74 1.08 0.94 -0.11 -0.79 -0.57 -1.38 -0.43 0.0 -1.46
CRO64864 (gdhB)
0.09 -0.24 0.02 -0.37 -1.05 0.24 0.64 -0.61 0.68 0.75 0.1 0.08 -0.12 0.37 0.57 -0.02 1.84 0.37 -0.35 -2.09 -0.44 -0.33 -2.06 0.34 0.17 -0.5 -1.11 -0.1 0.65 -0.27 -0.87 -0.35 -1.75 -0.22 -2.07 -0.81 -2.19 -0.55 0.7 1.42 -0.6 -0.55 1.41 -2.17 -0.74 0.65 -1.11 -0.76 -0.38 -2.28 -0.02 -0.46 -0.57 1.25 -1.14 -0.99 -2.17 -0.49 -0.5 -0.65 0.03 -0.62 -0.27 -2.69 -1.18 -0.53 -0.3 -0.37 -0.13 -0.7 1.06 2.21 0.2 0.71 -0.41 0.76
CRO75479 (sdaB)
0.17 -0.02 -1.41 0.94 0.36 0.94 -0.73 -0.57 1.09 0.05 -0.95 -0.98 -0.95 -0.2 0.15 -0.81 -0.78 -1.1 -0.8 -1.49 -1.45 -1.05 -0.57 1.05 1.28 -0.59 -0.17 -0.04 -1.04 0.14 0.75 0.27 0.55 -0.87 -3.91 -0.84 1.67 -1.17 -0.82 -0.46 -1.32 -1.9 1.86 1.49 -1.63 1.99 -1.19 -2.98 -1.18 1.51 1.65 -2.22 -1.89 -1.08 -1.24 -4.5 -0.22 1.51 -1.83 -1.81 -1.14 -1.97 0.1 -1.6 -0.55 -0.54 -0.78 -1.01 -1.26 -1.88 -0.55 2.16 -1.12 0.14 0.15 -2.52
CRO75507 (gcvT_1)
0.56 -0.06 -1.66 1.26 0.33 0.59 -1.23 -0.95 0.56 0.44 -0.37 -0.38 -0.31 -0.87 -0.08 0.41 -0.29 -0.58 -0.47 -1.35 -1.28 -0.59 -1.71 1.94 0.89 -0.61 0.48 -0.05 0.28 -0.09 1.17 0.29 0.59 -0.68 -3.52 -1.43 0.02 -0.11 -1.25 -1.19 -0.37 -0.8 1.03 0.01 -2.81 1.12 -2.64 -2.28 -1.13 -0.09 0.77 -1.4 -0.85 -0.92 -2.15 -5.71 0.55 2.02 -1.04 -0.79 -0.49 -0.8 -0.08 -1.65 -0.95 0.5 -0.24 -0.29 -0.53 -1.41 -0.56 2.71 -0.62 -1.11 0.37 -2.78
-0.16 -0.57 -1.97 -0.01 0.65 2.08 -0.8 -1.54 -1.04 0.85 0.18 0.11 -0.12 -0.51 0.68 -0.01 -0.05 -0.26 0.24 -0.98 -0.91 0.04 -1.99 1.22 0.92 -0.19 0.34 -0.96 -0.45 -1.8 0.85 -0.22 -0.57 -0.58 -3.15 0.51 -1.11 0.44 0.29 0.12 -0.04 -0.12 0.02 -1.2 -2.56 0.99 -1.06 -1.2 -0.54 -1.21 0.97 -0.9 -0.36 -0.62 -1.39 -6.62 0.11 0.5 -0.5 -0.22 -0.14 -0.19 -1.05 0.1 0.12 0.71 0.33 0.84 -0.37 -0.47 -0.64 1.63 -0.22 -1.1 1.61 -1.97
1.63 2.32 -0.46 -2.16 -0.21 -0.49 0.07 1.33 -1.04 0.23 0.23 0.4 1.1 1.11 -1.46 1.49 0.98 -2.65 -2.41 -1.54 -2.15 0.07 -2.62 -0.24 0.1 -0.51 1.29 -1.17 -0.63 -0.83 2.25 0.2 -1.86 -0.21 -1.45 -0.8 -2.65 0.12 -1.41 -1.16 -2.94 -3.86 1.41 -2.36 1.01 1.23 -1.3 -2.45 -1.66 -2.78 -0.61 -3.22 -3.88 1.42 -1.02 -2.9 -1.87 -2.16 -1.72 -3.99 -1.95 -3.72 -0.55 -3.05 -3.36 -0.87 0.68 0.54 0.71 -1.85 -0.43 -0.39 -2.71 2.56 0.17 -1.32
0.76 0.67 -0.42 -1.63 0.83 0.89 0.86 1.08 -1.43 -0.01 -0.28 -0.1 0.28 1.63 -0.34 0.68 0.38 -1.71 -1.03 -0.13 -1.04 -0.45 -1.73 -0.11 -0.42 -0.63 0.14 -1.02 -0.86 -1.65 1.09 0.13 -1.45 -0.41 -1.24 0.83 -2.42 -0.11 0.5 0.83 -1.33 -2.35 0.66 -2.57 0.42 1.13 -0.83 -1.75 -1.16 -2.84 -0.3 -1.47 -2.55 0.77 -0.12 -2.9 -1.47 -2.86 -1.63 -3.2 -1.75 -2.73 -1.58 -3.78 -4.04 0.37 0.83 0.83 0.98 -0.39 0.65 -0.91 -1.74 3.13 0.42 -0.39
CRO77465 (mmsA_3)
0.99 1.02 -1.23 -1.23 -0.82 0.02 0.98 1.64 -1.67 0.97 0.98 1.03 1.22 1.6 0.42 1.89 1.12 -0.04 0.29 1.86 0.3 0.79 -3.26 0.45 -0.84 -1.29 0.13 -1.56 -1.3 -1.85 0.82 0.03 -2.29 -0.34 -2.44 0.65 -3.09 -0.83 0.35 0.43 -2.07 -2.85 0.21 -2.99 -0.66 -0.43 -1.98 -1.52 -1.14 -3.07 -1.92 -2.55 -2.82 0.91 -2.08 -1.58 -1.53 -1.91 -1.87 -2.82 -2.12 -2.71 -1.32 -3.11 -3.24 -0.69 0.14 0.04 0.29 -2.27 0.86 -0.62 0.2 2.15 -0.27 0.18
CRP08397 (ddl_2)
0.7 -0.29 0.05 -0.8 -0.93 -0.64 -0.84 -2.02 -0.74 0.36 0.51 0.65 0.72 -0.62 -0.51 0.67 0.14 0.25 -0.4 -1.5 -0.53 0.21 -1.79 -0.11 0.82 0.49 0.74 -0.37 -0.25 -0.43 0.68 -0.23 -0.58 0.07 -1.04 -1.47 -0.61 0.04 -2.04 -2.04 0.13 0.09 0.68 -0.8 -0.19 0.91 -0.32 -0.04 -0.34 -0.52 1.15 0.16 -0.22 0.57 -0.31 -4.03 0.54 -0.1 0.18 -0.4 -0.07 -0.17 -0.32 -0.76 -1.1 1.67 0.92 1.01 0.97 -0.88 -0.37 0.03 0.27 -0.01 -0.03 -2.02
CRP08431 (murC)
0.53 0.13 0.7 -0.89 -1.46 -0.13 -0.72 -1.72 -0.45 -0.02 0.32 0.4 0.54 -0.95 -0.43 0.72 0.08 0.3 -0.56 -1.59 -0.71 0.07 -1.12 -0.22 0.64 0.4 0.48 -0.32 -0.08 -0.81 0.44 -0.26 -0.04 0.19 -0.77 -1.36 -0.54 0.02 -1.5 -1.65 0.45 0.27 0.74 -0.73 -0.22 1.01 -0.44 -0.57 -0.52 -0.42 1.32 0.41 0.18 0.49 -0.42 -0.33 0.36 -0.41 0.54 0.11 0.26 0.19 -0.42 -0.8 -1.22 1.24 0.53 0.59 0.49 -0.43 -0.26 -0.1 0.28 0.23 -0.13 -1.74
CRP08462 (murG)
0.4 0.4 1.18 -1.0 -0.82 -0.3 -0.89 -2.39 -0.76 -0.3 -0.07 0.07 0.1 -0.89 -0.43 0.62 -0.41 -0.02 -0.5 -1.4 -0.59 -0.28 -0.52 -0.69 1.41 1.16 0.12 -0.39 -0.51 -0.74 0.1 -0.09 0.74 -0.26 -0.12 -2.25 -0.68 -0.04 -2.12 -2.24 0.95 0.2 0.81 -0.92 -0.57 0.76 -0.42 -0.13 -0.06 -0.62 1.14 0.88 0.31 0.53 -0.46 -2.56 0.31 -0.7 1.01 0.38 0.74 0.38 -0.74 -1.05 -1.53 0.97 0.17 0.28 0.12 0.11 -0.64 -0.02 0.05 0.46 -0.08 -2.54
CRP08496 (ftsW)
0.22 0.01 1.01 -1.59 -1.15 -0.11 -0.76 -2.04 -1.37 -0.07 -0.33 -0.13 -0.24 -0.71 -0.38 0.38 -0.68 -0.29 -0.26 -1.14 -0.33 -0.61 -1.32 -0.62 0.78 0.5 0.38 -0.51 -0.74 -1.01 0.38 -0.22 -0.26 -0.22 -0.17 -0.8 -0.34 0.53 -1.19 -1.21 1.03 0.77 0.93 -0.7 -0.43 0.94 0.44 -0.45 -0.47 -0.23 1.35 1.02 0.82 0.14 0.32 -2.29 -0.04 -0.43 1.04 0.69 0.96 0.74 -0.37 -0.68 -1.1 0.86 0.19 0.41 0.14 0.45 -0.59 -0.19 -0.11 -1.28 -0.88 -1.81
CRP08524 (murD)
-0.11 -0.32 0.38 -1.27 -1.28 0.2 -0.68 -1.76 -0.45 -0.02 -0.12 0.01 -0.01 -0.19 0.18 -0.02 -0.19 0.02 -0.67 -1.75 -0.76 -0.28 -1.65 -0.7 0.82 0.55 -0.14 -0.27 -0.33 -0.6 -0.18 -0.26 -0.12 -0.09 -0.91 -0.95 -0.4 0.15 -0.72 -0.5 1.23 1.08 0.9 -0.65 -0.32 0.9 -0.16 -0.41 -0.2 -0.32 1.06 1.02 0.91 0.32 -0.19 -0.08 0.05 -0.5 1.09 0.86 0.97 0.92 -0.44 -0.86 -1.3 0.46 -0.14 -0.02 -0.14 -0.4 -0.11 -0.49 0.08 -0.33 0.01 -1.42
CRP08552 (mraY)
0.5 -0.13 1.08 -1.92 -1.81 0.43 -0.02 -1.12 -0.86 0.06 -0.23 -0.07 -0.04 -0.07 0.02 0.34 -0.61 0.08 -0.56 -1.81 -0.52 -0.3 -1.53 -0.65 0.16 0.11 0.33 -0.42 -0.14 -0.78 0.23 -0.35 -0.85 -0.15 -0.66 0.03 -0.85 0.35 0.03 0.04 1.07 0.78 0.51 -1.17 -0.19 0.41 0.05 -0.67 -0.65 -0.74 0.53 1.01 0.84 0.37 -0.15 -0.07 -0.18 -0.54 0.94 0.72 0.93 0.76 -0.4 -0.82 -1.2 0.82 0.29 0.42 0.19 0.39 -0.04 -0.5 0.05 -1.22 -0.69 -0.8
CRP08587 (murF)
0.24 -0.12 0.83 -1.06 -0.7 0.47 -0.51 -1.78 -0.28 0.13 0.06 0.16 0.2 -0.46 -0.2 0.81 0.13 0.07 -0.32 -1.29 -0.38 -0.06 -0.84 -0.15 1.15 0.84 -0.37 0.17 -0.61 -0.28 -0.44 -0.1 0.2 -0.1 -0.44 -1.55 -0.17 0.09 -1.99 -1.68 0.3 0.13 0.94 -0.46 -0.27 1.11 0.15 -0.49 -0.22 -0.17 1.0 0.28 -0.01 0.54 0.23 -2.16 0.36 -0.63 0.31 -0.04 -0.1 0.11 -0.61 -0.97 -1.53 0.97 0.41 0.6 0.29 -0.05 -0.36 -0.07 0.1 0.42 0.24 -1.95
CRP08619 (murE)
0.58 0.08 0.68 -0.31 -0.56 0.35 -0.78 -1.69 -0.25 0.24 0.37 0.52 0.57 -0.52 -0.12 0.96 -0.29 0.41 -0.09 -1.23 -0.22 0.17 -1.49 -0.15 1.2 0.96 -0.32 0.02 -0.26 0.0 -0.25 0.01 -0.01 0.14 -0.74 -1.17 -0.08 -0.74 -1.53 -1.51 -0.69 -0.89 1.41 -0.42 -0.46 0.8 -0.2 -0.35 0.28 -0.09 0.97 -0.87 -1.09 0.84 -0.34 -1.99 0.92 -0.57 -0.79 -1.19 -1.17 -0.96 -0.5 -0.81 -1.22 1.18 0.77 0.71 0.57 -0.53 -0.41 0.13 0.45 0.05 0.37 -1.83
CRP08651 (ftsI_2)
0.49 -0.06 1.08 -0.77 -1.05 0.55 -0.15 -1.34 -0.78 0.04 0.03 0.19 0.12 -0.22 -0.06 0.65 -1.21 -0.14 -0.08 -0.93 -0.21 -0.22 -1.07 -0.86 1.33 1.13 0.01 0.02 -0.62 -0.56 -0.14 0.1 -0.22 0.01 -0.2 -0.36 0.16 -0.51 -0.88 -0.86 -0.09 -0.68 1.23 -0.26 0.19 0.88 0.3 -0.86 0.09 0.23 1.11 -0.2 -0.62 0.46 0.38 -0.57 0.63 -0.79 -0.18 -0.89 -0.43 -0.7 -0.16 -0.69 -1.05 0.68 0.62 0.4 0.29 0.03 -0.42 -0.29 0.03 -0.14 0.2 -1.27
CRP08673 (ftsL)
0.4 0.18 0.44 -1.2 -1.91 0.04 -0.38 -1.58 -0.15 -0.29 -0.03 0.11 -0.09 -2.01 -0.65 0.43 -0.98 -0.38 -1.3 -1.71 -0.88 -0.31 -0.84 -0.95 1.25 0.83 0.21 0.38 -0.5 0.01 0.02 -0.02 -0.13 -0.31 -0.16 -1.1 0.54 -0.09 -1.62 -1.46 0.81 0.19 1.74 0.12 -0.08 0.34 -0.64 0.13 0.76 0.55 0.38 0.09 0.37 0.52 -0.41 -1.07 0.11 -0.63 0.47 0.27 0.24 0.51 -0.16 -0.07 -0.84 0.44 0.43 -0.03 0.22 0.87 -1.06 -0.41 -0.14 -0.07 0.48 -2.01
-0.52 0.74 1.01 -1.5 -2.95 -1.18 -4.15 -2.73 0.04 -0.85 -0.66 -0.46 -0.48 -3.94 -3.09 0.43 -2.98 -0.48 0.59 -2.36 0.89 -0.9 0.93 -0.47 1.6 1.76 -0.95 0.32 -0.01 0.47 -0.99 0.41 1.33 -0.72 1.2 -4.76 -0.34 0.44 -5.46 -6.27 1.0 -0.49 0.21 -0.59 -1.31 0.98 -0.06 1.16 0.53 -0.27 0.7 0.75 -0.06 -0.11 0.05 -0.22 0.61 0.98 0.92 -0.31 0.86 -0.03 0.87 -1.34 -0.77 -1.24 -1.62 -1.1 -1.14 -0.4 -1.43 0.45 -0.28 -0.49 -0.76 -2.5
CRP28741 (yybR_3)
3.51 1.34 -2.15 1.16 -0.46 -0.32 -1.1 -0.48 -1.55 -1.38 -1.11 -1.15 -1.47 -2.77 -2.48 -1.53 -1.89 -1.94 -1.89 -1.3 -1.65 -1.35 -2.58 -2.43 1.68 1.54 -0.89 -1.45 -0.79 -2.06 -0.95 0.36 1.13 -0.56 0.58 -0.58 0.6 -1.01 -0.91 -0.8 -0.13 -1.07 -0.45 0.08 -0.35 0.93 0.12 0.21 0.68 0.76 0.67 -0.47 -1.09 -0.68 0.2 -2.94 -0.22 -0.3 -0.56 -1.11 -1.04 -0.93 0.05 -1.01 -0.29 -0.54 0.3 -0.05 0.17 1.27 -1.84 -0.27 -1.91 1.34 0.2 -1.1
-0.15 -0.52 -0.6 0.43 1.01 -2.04 -2.71 -3.39 -0.08 -1.31 -2.52 -2.19 -2.37 -4.7 -3.08 -1.97 0.3 -7.72 -0.37 -0.12 -0.5 -2.47 -0.61 -0.96 0.35 0.57 -0.3 -0.4 -0.48 0.24 0.03 0.27 0.15 -0.11 1.14 - 0.32 0.05 -4.35 -4.84 0.81 1.34 -0.15 -0.33 1.09 -0.79 -0.18 0.64 1.02 0.52 -0.77 0.55 1.37 0.28 -0.46 -4.44 0.45 -1.42 0.39 1.35 0.58 1.61 -0.83 -1.17 -0.58 0.73 1.11 0.58 0.78 0.24 -5.38 0.66 -6.86 0.64 1.59 -4.11
CRP68816 (gcvH_3)
-0.14 0.53 -0.01 -1.66 -0.76 0.07 -1.37 -0.74 2.32 0.36 -0.98 -0.73 -0.71 0.24 0.13 -1.7 1.78 0.48 -2.6 -1.35 -2.06 -0.83 -1.59 1.12 1.72 0.44 -0.15 -0.18 0.2 -1.71 -0.05 0.2 2.88 -2.28 -3.11 -1.6 -5.77 -1.31 -1.13 -1.1 -0.92 -0.64 1.2 -5.59 -2.04 1.3 -0.79 -4.5 -1.52 -5.69 1.6 -1.61 -0.73 -0.46 -0.81 -5.45 -0.37 1.44 -4.79 -0.84 -1.74 -0.93 0.42 -5.94 -7.37 -0.95 -0.91 -1.3 -1.24 -0.06 -0.93 2.11 0.37 0.85 0.51 -2.71
CRP68838 (gcvP_2)
0.48 0.65 -1.31 -0.99 -0.73 1.24 -0.79 0.91 1.51 0.36 -1.3 -1.26 -1.4 0.08 0.39 -1.54 1.66 -0.13 -3.26 -1.92 -2.63 -1.45 -2.7 1.44 0.26 -0.99 -0.46 0.02 0.08 -1.78 0.05 -0.31 -0.08 -1.88 -4.2 0.28 -4.52 -0.58 0.96 0.72 0.93 0.31 2.17 -4.9 -1.6 0.7 -1.41 -4.12 -2.0 -4.62 0.17 0.05 0.37 -0.26 -1.26 -4.29 -0.91 2.04 -2.79 0.18 -0.28 0.09 0.51 -5.32 -5.47 -1.31 -1.4 -1.56 -1.5 -1.4 0.56 2.67 -0.3 0.2 0.03 -1.69
-0.12 -0.98 -0.17 -1.18 0.41 0.01 -0.82 -0.55 0.42 -0.12 -0.86 -0.79 -0.88 -1.53 -0.81 -0.19 -0.35 0.31 -0.9 -0.46 -0.38 -1.13 -1.45 -0.04 0.42 0.8 0.39 -0.46 0.78 -0.94 0.52 0.2 -0.11 -0.28 -1.72 -1.65 -2.14 0.89 -1.15 -1.65 -1.42 -0.6 1.36 -2.49 0.48 -0.12 1.47 0.15 -0.54 -2.06 0.34 -1.19 -0.82 1.65 1.41 -5.56 0.75 -2.83 -1.72 -0.86 -1.82 -0.74 -1.27 -3.37 -4.59 1.35 1.72 1.23 1.29 -0.59 -0.12 0.94 0.32 -0.91 1.51 0.05
-0.59 -0.98 0.54 -1.45 1.18 1.11 -0.01 0.89 2.72 -0.57 -1.51 -1.73 -1.61 -0.33 -1.01 -2.39 0.11 -2.46 -2.56 -2.34 -2.34 -1.52 -0.38 0.31 0.17 0.45 -2.57 0.03 -1.77 -0.29 -2.29 -0.02 0.46 -0.33 -2.73 -1.87 -2.71 -0.94 1.09 1.65 -4.23 -0.94 2.19 -3.06 2.28 0.66 -1.02 -2.64 -1.98 -2.56 0.16 -4.33 -0.97 0.91 -0.95 -3.82 -1.46 -3.14 -4.34 -1.09 -3.88 -1.26 -1.59 -4.79 -4.11 0.89 0.62 0.44 0.09 -1.71 0.61 2.4 -2.61 -1.42 1.62 1.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.