Coexpression cluster: Cluster_24 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046395 carboxylic acid catabolic process 7.55% (4/53) 5.62 1e-06 2.1e-05
GO:0016054 organic acid catabolic process 7.55% (4/53) 5.62 1e-06 2.1e-05
GO:0009064 glutamine family amino acid metabolic process 7.55% (4/53) 5.62 1e-06 2.1e-05
GO:0009065 glutamine family amino acid catabolic process 5.66% (3/53) 6.94 1e-06 2.7e-05
GO:1901606 alpha-amino acid catabolic process 7.55% (4/53) 5.77 0.0 3.8e-05
GO:0009063 cellular amino acid catabolic process 7.55% (4/53) 5.77 0.0 3.8e-05
GO:0044282 small molecule catabolic process 7.55% (4/53) 5.13 4e-06 8.3e-05
GO:0006525 arginine metabolic process 5.66% (3/53) 6.2 5e-06 9.9e-05
GO:1901605 alpha-amino acid metabolic process 9.43% (5/53) 4.18 7e-06 0.00012
GO:0044248 cellular catabolic process 7.55% (4/53) 4.55 2.1e-05 0.000302
GO:1901565 organonitrogen compound catabolic process 7.55% (4/53) 4.55 2.1e-05 0.000302
GO:0006527 arginine catabolic process 3.77% (2/53) 6.94 6.5e-05 0.00068
GO:0008791 arginine N-succinyltransferase activity 3.77% (2/53) 6.94 6.5e-05 0.00068
GO:0016749 N-succinyltransferase activity 3.77% (2/53) 6.94 6.5e-05 0.00068
GO:0016748 succinyltransferase activity 3.77% (2/53) 6.94 6.5e-05 0.00068
GO:1901575 organic substance catabolic process 7.55% (4/53) 3.66 0.000261 0.002557
GO:0009056 catabolic process 7.55% (4/53) 3.58 0.000317 0.002927
GO:0006520 cellular amino acid metabolic process 9.43% (5/53) 3.0 0.000374 0.003259
GO:0051301 cell division 3.77% (2/53) 5.62 0.00064 0.005023
GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors 3.77% (2/53) 5.62 0.00064 0.005023
GO:0016874 ligase activity 7.55% (4/53) 2.94 0.001732 0.011824
GO:0043436 oxoacid metabolic process 9.43% (5/53) 2.52 0.001672 0.011934
GO:0019752 carboxylic acid metabolic process 9.43% (5/53) 2.52 0.001672 0.011934
GO:0006082 organic acid metabolic process 9.43% (5/53) 2.43 0.002212 0.014472
GO:0044281 small molecule metabolic process 11.32% (6/53) 1.99 0.00367 0.023045
GO:0008483 transaminase activity 3.77% (2/53) 4.13 0.005556 0.033549
GO:0006538 glutamate catabolic process 1.89% (1/53) 6.94 0.008139 0.035494
GO:0009015 N-succinylarginine dihydrolase activity 1.89% (1/53) 6.94 0.008139 0.035494
GO:0004353 glutamate dehydrogenase [NAD(P)+] activity 1.89% (1/53) 6.94 0.008139 0.035494
GO:0004352 glutamate dehydrogenase (NAD+) activity 1.89% (1/53) 6.94 0.008139 0.035494
GO:0006103 2-oxoglutarate metabolic process 1.89% (1/53) 6.94 0.008139 0.035494
GO:0006106 fumarate metabolic process 1.89% (1/53) 6.94 0.008139 0.035494
GO:0043649 dicarboxylic acid catabolic process 1.89% (1/53) 6.94 0.008139 0.035494
GO:0019551 glutamate catabolic process to 2-oxoglutarate 1.89% (1/53) 6.94 0.008139 0.035494
GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor 1.89% (1/53) 6.94 0.008139 0.035494
GO:0016769 transferase activity, transferring nitrogenous groups 3.77% (2/53) 4.03 0.006377 0.037083
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_11 0.042 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_16 0.043 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_30 0.031 OrthoFinder Compare
Escherichia coli HCCA Cluster_7 0.072 OrthoFinder Compare
Escherichia coli HCCA Cluster_15 0.029 OrthoFinder Compare
Escherichia coli HCCA Cluster_18 0.041 OrthoFinder Compare
Escherichia coli HCCA Cluster_23 0.09 OrthoFinder Compare
Escherichia coli HCCA Cluster_25 0.04 OrthoFinder Compare
Escherichia coli HCCA Cluster_27 0.041 OrthoFinder Compare
Escherichia coli HCCA Cluster_30 0.045 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_2 0.034 OrthoFinder Compare
Haemophilus influenzae HCCA Cluster_11 0.055 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_8 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_2 0.034 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_3 0.035 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_5 0.031 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_11 0.038 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_21 0.032 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_23 0.028 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_25 0.035 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_30 0.041 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_32 0.034 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_36 0.041 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_51 0.029 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_8 0.038 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_14 0.038 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_5 0.029 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_2 0.035 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_33 0.051 OrthoFinder Compare
Salmonella enterica HCCA Cluster_6 0.051 OrthoFinder Compare
Salmonella enterica HCCA Cluster_10 0.051 OrthoFinder Compare
Salmonella enterica HCCA Cluster_30 0.049 OrthoFinder Compare
Salmonella enterica HCCA Cluster_47 0.053 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_11 0.046 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_2 0.032 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_7 0.038 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_17 0.028 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_18 0.038 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_10 0.051 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_12 0.05 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_16 0.03 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_29 0.031 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_37 0.043 OrthoFinder Compare
Sequences (53) (download table)

InterPro Domains

GO Terms

Family Terms