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Heatmap: Cluster_7 (HCCA)

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(Showing raw values)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL17061 (BN171_1170003)
 180.29 46.91 133.47 55.7 134.45 356.01 13.0 136.09 167.92 8.79 27.93 26.01 259.47 111.66 55.4 26.0 110.3 138.26 143.6 322.56 50.37 6.81 240.59 1167.99 628.46 108.73 2076.35 44.9 0.0
CCL17067 (BN171_1190001)
 2.19 1.63 7.96 11.62 4.08 0.58 33.16 0.44 0.44 45.93 27.6 16.12 41.1 2.04 2.11 2.98 0.29 0.99 0.99 1.14 2.46 4.15 0.84 0.11 0.29 0.76 25.27 2.33 4.45
CCL17238 (BN171_1400010)
 1.84 0.88 6.94 4.89 3.84 19.49 129.42 0.77 1.62 78.59 171.34 99.12 1343.16 2.22 5.2 2.85 0.46 0.97 5.05 0.0 5.7 0.0 1.92 3.11 2.58 0.0 2689.44 14.07 168.08
CCL17240 (BN171_1410002)
 1.83 2.66 1.78 3.29 1.9 6.87 354.2 1.11 0.44 70.13 44.91 31.08 214.72 1.51 2.2 1.54 1.03 1.57 4.71 1.55 13.83 258.75 0.47 0.49 0.53 0.98 2467.1 8.43 28.69
CCL17241 (BN171_1410003)
 1.08 0.85 1.68 1.56 1.19 1.07 47.09 1.12 1.32 6.5 5.39 5.13 25.72 1.0 1.12 2.85 1.35 0.89 1.84 1.1 0.95 10.13 2.58 0.62 0.57 0.57 32.45 5.71 2.03
CCL17242 (BN171_1410004)
 18.48 24.04 24.64 45.54 17.86 21.95 1556.79 10.21 18.05 2118.11 1276.51 973.96 3242.37 14.13 30.72 12.48 7.92 15.59 54.49 12.61 47.43 200.05 24.84 11.03 11.52 5.86 10368.93 18.64 448.63
CCL17283 (BN171_1430010)
 5.83 1.85 8.63 6.27 4.92 45.95 139.65 2.7 3.21 107.15 91.94 85.1 221.19 14.75 2.43 82.45 12.41 2.89 26.38 8.98 6.75 28.57 44.06 74.85 53.56 3.83 324.97 39.55 39.61
CCL17382 (sigK)
 39.23 27.08 35.59 26.21 15.68 42.3 238.47 17.87 69.45 150.78 181.74 123.08 274.0 33.06 24.64 60.33 33.72 21.51 46.21 35.63 54.24 85.49 65.48 87.86 79.13 11.85 1813.09 25.66 103.67
CCL17394 (sigE)
 2.6 1.35 5.12 5.33 2.11 7.67 288.69 0.99 0.48 285.61 209.75 148.5 178.21 1.01 1.97 2.13 1.36 2.9 5.46 0.41 6.57 9.84 2.71 4.05 0.43 0.33 1086.89 4.64 120.97
CCL17618 (BN171_1640008)
 1.35 1.24 1.73 3.7 1.56 1.07 58.92 0.61 0.39 77.9 69.87 50.05 87.45 1.91 2.56 2.64 1.03 1.83 2.72 1.23 4.99 16.61 0.79 0.87 1.58 0.72 533.65 2.76 26.75
CCL17665 (BN171_1660006)
 9.63 12.37 4.7 13.09 15.42 8.17 0.0 12.02 0.0 0.0 0.0 0.0 30.04 4.42 20.73 0.0 3.28 2.6 0.24 7.94 31.3 0.0 0.0 2391.43 8.17 6.71 2992.37 2.27 0.0
CCL17718 (feoB)
 8.68 9.8 8.89 18.64 8.37 4.5 37.2 4.36 33.58 78.56 53.56 45.67 114.0 5.55 10.71 12.06 16.24 7.99 36.09 8.22 10.82 41.63 81.8 50.49 19.02 4.21 306.83 38.02 25.06
CCL17719 (feoA)
 15.62 31.02 12.32 53.31 23.06 13.72 22.41 8.24 163.77 46.66 19.29 19.25 308.86 16.73 51.93 25.68 20.56 22.99 48.46 55.13 40.32 166.4 84.83 100.31 43.21 24.95 722.25 52.92 35.08
CCL17783 (BN171_1800006)
 17.12 36.21 30.14 41.88 31.38 28.46 1328.39 32.61 1.48 507.99 341.88 472.24 4479.38 3.29 10.12 15.08 7.46 12.03 11.03 9.63 18.44 42.36 2.76 6.1 8.82 23.39 5377.21 19.17 130.62
CCL17818 (BN171_1810025)
 13.96 6.65 10.0 11.09 8.39 5.69 579.21 4.44 14.82 376.39 218.36 269.4 1272.27 6.74 5.78 13.88 8.64 7.72 11.93 12.68 7.28 9.16 10.97 17.03 20.73 4.31 1063.82 3.55 88.65
CCL17956 (BN171_1970025)
 2.23 3.69 2.56 6.29 2.27 0.41 20.22 0.74 3.22 12.61 7.53 7.52 6.78 1.97 3.12 6.51 1.93 1.65 1.42 0.51 1.12 13.08 0.62 0.6 0.37 0.29 60.86 3.74 6.88
CCL17957 (grdF)
 2.81 5.58 3.7 9.67 4.26 0.76 25.83 1.42 3.8 18.6 10.83 10.72 6.68 3.22 5.48 7.05 2.76 2.58 1.7 0.67 1.33 14.92 0.99 0.83 0.57 0.42 40.32 3.59 6.02
CCL17958 (BN171_1970027)
 11.19 28.9 15.03 43.93 12.21 1.38 0.0 6.91 20.61 20.58 5.48 5.24 10.88 14.63 19.68 15.21 9.66 10.66 4.36 3.96 7.82 49.89 2.17 3.15 1.81 1.9 106.85 12.41 2.97
CCL17993 (BN171_200014)
 48.79 19.39 65.75 95.44 58.49 34.33 247.85 20.2 31.11 170.93 138.69 133.92 224.12 37.67 18.04 114.36 28.44 34.35 124.65 54.25 28.82 114.9 84.24 52.74 85.69 28.81 180.59 40.95 76.67
CCL17994 (BN171_200015)
 3.19 1.1 4.84 6.59 2.91 18.08 166.24 0.81 9.17 137.73 101.83 109.54 178.82 2.84 0.78 70.63 15.95 2.29 85.19 4.7 3.38 35.86 65.21 22.57 31.07 2.09 73.04 66.8 56.11
CCL18140 (ytlA)
 0.39 0.4 0.52 1.28 0.35 3.77 25.17 0.17 14.57 48.06 33.13 20.57 56.71 0.57 0.92 0.9 1.99 0.74 34.19 4.25 2.74 37.36 47.7 30.58 8.58 2.07 348.36 2.46 11.8
CCL18146 (BN171_2130003)
 14.87 22.39 33.49 55.6 28.38 74.29 338.63 8.05 333.66 340.27 339.54 348.89 385.0 10.29 20.91 63.09 225.37 10.75 314.15 52.73 135.81 21.3 506.63 250.95 78.5 13.73 254.19 66.62 358.67
CCL18147 (BN171_2130004)
 61.56 198.56 68.52 153.08 65.59 55.57 366.21 62.94 253.16 357.27 364.69 349.79 284.67 15.95 89.53 51.73 149.35 44.93 242.73 76.85 209.91 69.26 348.76 220.26 50.18 40.25 226.64 39.3 269.22
CCL18153 (BN171_2130010)
 0.66 0.64 1.28 1.82 1.18 0.44 42.36 0.37 1.62 71.41 50.13 48.13 58.09 1.3 0.91 2.4 1.28 1.0 1.86 0.63 0.92 3.97 1.84 0.58 0.87 0.28 77.55 4.54 18.73
CCL18179 (tauB)
 0.99 0.31 0.98 1.83 0.8 0.42 66.07 0.19 0.48 105.48 61.62 55.7 52.8 0.76 0.42 2.2 0.94 0.96 1.22 0.54 0.77 2.14 0.69 0.76 0.71 0.29 78.92 3.45 28.11
CCL18286 (BN171_220038)
 28.59 119.5 17.16 64.61 8.46 10.2 82.64 20.55 1827.59 87.38 71.89 85.86 385.24 23.63 163.35 34.28 609.48 33.72 515.08 36.51 128.86 61.55 72.28 286.76 35.68 14.93 2940.8 406.63 58.26
CCL18301 (BN171_2210001)
 0.0 0.0 0.0 3.1 2.37 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.85 0.0 0.0 0.0 1.84 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.35 0.0
CCL18394 (BN171_2280010)
 0.58 0.3 1.78 2.92 0.79 0.9 22.05 0.21 0.52 37.55 25.73 16.6 31.8 0.61 0.45 3.58 0.87 0.46 1.2 0.5 1.19 0.68 1.58 0.42 1.2 0.23 13.83 3.68 7.83
CCL18527 (BN171_2410009)
 3.06 2.01 5.02 16.19 8.59 1.17 18.84 1.75 0.8 9.73 5.64 5.42 23.81 4.52 3.07 2.67 1.33 3.13 2.17 2.77 3.92 6.49 3.31 1.63 2.26 2.18 47.88 5.74 3.95
CCL18528 (BN171_2410010)
 1.83 0.86 4.29 12.3 6.06 1.15 9.63 0.53 0.39 5.58 3.5 3.88 18.98 3.3 1.49 3.18 1.34 2.42 1.1 1.97 3.56 3.89 1.11 0.75 2.43 1.83 7.35 3.87 1.79
CCL18529 (BN171_2410011)
 0.15 0.12 1.09 2.42 1.1 0.66 7.53 0.07 0.14 6.05 3.95 3.66 31.84 0.66 0.0 3.02 0.77 0.17 1.01 0.18 1.05 0.43 1.23 0.56 2.19 0.15 4.68 4.44 2.99
CCL18530 (BN171_2410012)
 0.77 0.26 1.53 3.71 1.27 0.93 18.25 0.31 0.5 28.0 22.75 18.78 116.96 1.27 0.39 3.38 1.37 0.86 1.91 0.95 1.06 0.45 1.54 1.07 5.9 0.7 26.27 5.8 14.47
CCL18573 (BN171_2440014)
 20.53 11.49 37.24 50.57 30.73 5.88 203.88 12.99 13.36 190.2 144.61 159.3 366.58 17.86 12.73 19.83 6.67 11.77 6.25 9.85 8.03 11.66 11.46 7.57 6.46 5.43 260.23 11.31 53.32
CCL18752 (BN171_2600011)
 0.93 0.22 2.25 2.35 1.55 4.82 66.31 0.81 60.4 85.29 70.6 55.79 94.36 2.07 0.57 15.03 17.69 1.14 21.24 1.48 2.25 4.76 36.2 19.66 27.38 0.9 26.87 21.23 30.16
CCL18809 (BN171_2650006)
 2.5 0.82 10.8 5.92 7.3 13.3 63.8 1.44 0.0 274.14 188.68 170.03 443.34 5.78 0.0 6.05 0.77 2.78 7.9 3.84 26.73 54.75 0.32 2.0 1.61 0.8 6856.14 39.41 122.41
CCL18810 (cotJB)
 1.49 0.77 3.26 1.56 1.65 2.0 103.84 1.09 0.43 392.63 291.17 267.89 267.01 1.54 4.11 3.61 1.54 1.99 9.63 1.67 5.94 87.02 0.47 1.34 1.86 0.72 3482.17 30.45 210.9
CCL18811 (cotJC)
 2.44 1.52 2.07 2.52 1.48 2.6 59.77 1.29 0.73 141.24 104.72 83.35 211.75 1.29 2.52 4.05 1.57 2.27 11.85 1.34 4.91 61.27 3.54 1.9 2.29 0.48 2425.97 28.43 61.92
CCL18819 (BN171_2670001)
 3.21 14.22 12.65 38.21 14.92 7.52 121.16 1.24 2.27 43.67 100.24 48.92 327.33 2.64 18.07 6.5 4.93 1.25 19.45 2.48 100.58 44.19 8.61 4.08 3.72 1.72 431.67 29.0 56.05
CCL18956 (BN171_2770007)
 17.35 44.02 14.84 97.99 11.26 0.0 0.0 6.77 702.43 0.0 0.0 0.0 154.39 5.14 86.32 0.0 59.9 9.11 21.42 1.68 19.29 0.0 5.66 1.63 1.49 0.0 17.51 2.41 0.0
CCL19308 (BN171_3020020)
 17.54 9.55 31.71 33.88 9.04 102.81 297.61 2.0 460.8 206.14 174.11 207.35 374.13 24.04 20.59 96.68 35.5 13.98 59.45 38.29 92.87 19.1 106.85 212.43 117.66 14.69 330.27 146.34 113.66
CCL19313 (BN171_3020025)
 2.06 2.79 2.08 6.27 2.29 0.62 37.21 1.41 26.06 26.15 4.13 10.1 5.53 1.45 1.88 4.34 8.04 2.13 6.1 0.62 3.37 25.79 3.07 6.66 2.28 1.11 100.05 0.0 0.99
CCL19314 (BN171_3020026)
 0.77 1.23 0.65 2.29 1.16 0.77 53.39 0.75 17.99 42.98 6.75 10.08 3.89 0.57 0.63 3.52 4.25 1.08 4.27 0.41 1.23 13.93 2.29 5.33 1.6 0.52 69.76 0.0 0.43
CCL19401 (spoVFB)
 20.97 8.95 37.55 94.21 41.51 6.53 42.18 12.99 28.22 63.57 56.59 37.63 68.22 17.27 9.9 26.13 12.11 16.68 20.19 16.2 17.81 27.04 36.45 22.8 27.2 9.68 478.25 26.0 39.21
CCL19402 (dpaA)
 1.04 1.8 6.58 25.7 10.73 2.35 16.54 1.24 0.99 30.35 25.25 19.27 37.29 1.22 2.51 5.25 2.03 2.51 2.7 2.16 6.71 14.1 2.67 1.53 3.18 2.11 283.81 4.04 13.62
CCL19440 (BN171_3150003)
 11.93 11.34 9.18 15.43 10.3 6.76 42.94 10.89 18.31 31.74 19.94 24.16 37.61 6.19 8.74 24.53 8.55 11.34 16.23 8.63 10.2 17.98 23.55 18.33 10.75 6.07 93.62 24.64 19.62
CCL19467 (BN171_3170001)
 1.12 0.71 1.03 1.83 1.02 0.93 63.0 0.31 0.66 57.98 36.43 39.85 96.35 0.73 0.77 2.4 1.3 0.73 7.62 1.17 1.64 5.68 6.87 1.51 1.67 0.92 189.89 0.0 14.76
CCL19483 (BN171_3180007)
 1.61 4.7 2.35 13.38 3.6 0.48 17.53 0.97 2.27 14.73 5.68 11.4 9.42 1.01 5.56 3.99 1.86 2.02 6.21 0.56 1.43 2.33 2.35 1.31 1.7 0.26 4.82 2.49 2.05
CCL19484 (BN171_3180008)
 2.97 8.91 5.99 25.12 8.88 1.92 27.13 2.27 7.22 28.62 12.93 30.08 11.68 3.48 11.65 2.23 5.45 3.9 9.14 1.78 2.24 0.0 4.25 1.39 1.77 1.34 6.71 9.81 3.73
CCL19814 (BN171_3510002)
 0.44 0.16 0.3 0.67 0.39 0.31 26.6 0.14 0.05 15.79 12.98 7.2 10.95 0.35 0.31 2.44 0.13 0.4 13.54 0.27 0.88 7.29 2.23 0.14 0.25 0.23 51.75 3.35 7.0
CCL19991 (BN171_3610034)
 0.24 0.18 0.44 1.03 1.0 0.3 58.44 0.2 0.0 5.97 1.38 2.75 16.75 0.34 0.27 4.22 0.87 0.31 2.51 0.32 0.33 25.93 1.15 0.24 0.27 0.18 34.02 5.12 0.48
CCL20036 (BN171_3670019)
 103.74 136.37 89.94 84.29 92.13 66.04 226.61 92.05 65.57 239.24 200.84 205.51 269.18 93.09 87.49 197.67 54.19 97.17 123.77 125.27 84.27 337.35 81.6 80.16 80.46 80.8 162.38 58.36 158.98
CCL20048 (BN171_3670031)
 0.88 0.36 1.72 1.74 2.04 1.2 43.43 0.46 1.02 45.66 21.48 15.11 42.73 1.33 0.27 5.3 2.09 1.43 14.92 1.82 3.29 4.55 12.09 2.64 3.47 1.3 135.61 8.75 11.28
CCL20088 (BN171_3690032)
 155.06 101.94 143.36 132.88 155.97 47.38 1609.02 183.98 25.63 642.67 484.17 483.86 861.88 92.99 68.89 103.17 41.02 132.5 141.3 214.3 99.74 40.32 103.44 50.87 95.99 212.97 442.86 66.05 247.74
CCL20438 (sleC)
 0.47 0.76 0.8 1.41 0.6 0.29 28.78 0.27 0.12 29.62 22.7 14.96 91.75 0.45 0.56 1.17 0.45 0.36 2.02 0.18 1.72 26.61 1.06 0.23 0.18 0.14 537.5 1.4 7.93
CCL20500 (BN171_580009)
 40.74 11.07 133.69 176.04 87.8 1.81 2657.1 0.54 2.19 992.85 913.97 1248.64 5200.93 26.24 23.17 4.27 3.54 11.82 20.16 22.52 68.87 3.43 6.74 1.96 4.0 9.48 960.34 22.35 419.14
CCL20501 (cotJB)
 2.34 2.48 6.34 11.75 3.94 0.87 1666.72 0.45 0.45 725.29 553.42 789.68 1454.98 2.9 2.62 6.58 0.93 1.81 7.26 1.55 3.06 0.0 1.34 1.2 1.61 1.01 392.22 10.75 211.12
CCL20502 (cotJC)
 4.64 6.04 10.79 20.0 6.53 2.91 901.88 2.44 0.73 410.45 261.36 328.48 1445.19 2.99 3.49 5.45 2.99 3.13 6.36 1.82 8.58 3.32 3.09 1.8 1.74 1.14 435.71 6.5 109.88
CCL20503 (BN171_590001)
 0.0 0.0 0.0 0.0 0.0 2.95 0.0 0.0 0.0 0.0 0.0 0.0 8.54 0.0 0.0 0.0 0.41 0.0 0.14 0.0 0.0 0.0 0.57 0.0 0.0 0.0 0.37 0.0 26.18
CCL20751 (BN171_990001)
 14.91 11.51 32.64 40.17 45.5 35.55 98.03 26.96 12.21 78.25 63.74 63.5 128.0 22.76 15.15 48.88 15.85 30.35 32.81 32.14 22.31 14.87 61.0 30.67 35.78 38.41 10.66 29.47 43.01

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)