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View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19174 (cdaR) | -1.38 | 0.51 | -0.9 | -0.6 | 2.18 | -1.79 | -2.77 | -0.49 | 0.91 | -0.5 | 0.75 | -1.53 | -0.31 | -1.4 | 1.29 | -0.89 | 1.75 | -0.82 | -1.17 | -0.54 | -1.15 | -1.21 | 0.99 | 0.45 | -1.38 | -1.64 | -1.01 | 0.83 | -1.16 | -3.79 | -1.67 | -0.97 | -1.49 | -0.43 | 1.44 | -0.29 | 1.02 | -0.82 | -0.57 |
AAL19569 (citT) | -1.02 | 0.43 | -1.4 | -2.39 | -2.02 | -1.8 | -0.87 | 0.39 | -0.03 | -1.89 | 1.03 | -1.61 | -0.67 | 1.32 | -1.25 | -0.71 | -1.58 | -1.91 | -1.31 | -1.12 | -1.21 | 0.91 | -0.71 | 1.25 | -1.0 | -1.02 | 2.97 | 0.5 | -1.82 | -1.92 | -1.5 | -1.55 | -1.61 | -1.02 | -0.07 | -0.11 | 2.26 | -2.29 | -1.11 |
AAL19570 (citG) | -0.95 | 0.96 | -0.31 | -1.62 | -3.07 | -2.83 | -1.54 | -0.91 | -0.51 | -0.63 | 0.56 | -1.69 | -0.61 | -1.56 | -1.34 | -1.96 | -0.8 | -0.49 | -0.75 | -0.41 | -1.87 | -0.5 | -2.74 | 0.44 | -1.05 | -1.41 | 3.51 | 0.93 | -1.76 | -4.18 | -1.72 | -1.8 | -1.87 | -1.46 | 0.08 | 0.94 | 2.33 | -2.31 | -1.28 |
AAL19571 (citX) | -0.16 | 0.63 | -3.01 | -2.34 | -4.01 | -4.59 | -1.33 | -0.07 | -0.52 | -2.66 | 0.59 | -1.24 | -2.38 | -3.27 | -2.37 | -3.35 | -3.27 | -3.5 | -3.04 | -2.95 | -2.82 | -1.61 | -2.55 | 0.09 | -2.28 | -3.45 | 3.97 | 0.61 | -3.77 | -4.69 | 1.19 | -4.54 | -3.03 | -1.94 | -3.48 | 1.17 | 2.67 | -4.33 | -2.83 |
AAL19572 (citF) | -1.04 | -0.34 | -3.59 | -2.67 | -3.24 | -5.2 | -1.93 | -1.06 | -0.56 | -3.06 | 0.36 | -2.08 | -3.4 | -3.05 | -1.92 | -3.79 | -3.97 | -3.24 | -3.52 | -3.21 | -3.08 | -3.0 | -1.75 | 1.22 | -2.83 | -4.42 | 4.08 | 0.67 | -3.57 | -6.15 | -2.99 | -3.59 | -3.35 | -2.2 | -3.6 | 1.59 | 2.96 | -4.59 | -1.87 |
AAL19573 (citE) | 0.05 | -0.06 | -2.22 | -1.93 | -2.73 | -3.59 | -1.33 | -0.69 | -0.03 | -1.7 | 0.67 | -1.53 | -2.41 | -0.66 | -1.38 | -3.24 | -2.18 | -2.8 | -3.07 | -2.54 | -2.65 | -1.09 | -2.3 | 0.8 | -2.05 | -2.29 | 3.86 | 0.54 | -2.73 | -4.48 | -2.37 | -2.45 | -2.56 | -2.32 | -2.67 | 1.85 | 2.54 | -3.2 | -1.18 |
AAL19574 (citD) | 0.12 | -0.42 | -3.51 | -2.28 | -2.38 | -5.53 | -1.18 | -0.73 | -0.22 | -2.82 | 0.92 | -2.54 | -2.79 | -1.71 | -1.19 | -2.61 | -3.39 | -3.94 | -4.3 | -3.76 | -3.18 | -2.1 | -1.35 | 0.99 | -1.91 | -4.07 | 3.86 | 0.32 | -3.02 | -7.19 | -2.98 | -2.79 | -3.2 | -1.48 | -3.94 | 2.14 | 2.75 | -4.18 | -1.95 |
AAL19575 (citC) | 1.0 | 0.33 | -3.03 | -1.81 | -2.34 | -5.29 | -0.91 | 0.39 | -0.46 | -2.87 | 0.77 | -2.97 | -3.32 | -2.85 | -1.24 | -0.94 | -1.47 | -2.33 | -3.15 | -2.78 | -2.34 | -1.8 | -0.74 | 2.48 | -1.29 | -4.11 | 2.23 | -0.0 | -3.14 | -5.95 | -3.87 | -3.25 | -3.18 | 0.12 | -2.99 | 1.74 | 3.39 | -3.83 | -2.1 |
AAL19577 (dpiA) | -0.65 | 0.05 | -0.45 | -0.38 | -0.6 | -2.87 | -0.27 | 0.36 | -0.22 | 0.39 | -0.02 | 0.79 | -0.45 | -0.49 | -0.32 | -1.04 | -0.35 | 0.25 | -0.09 | 0.22 | -1.56 | -0.65 | -1.61 | 0.94 | -1.24 | -0.84 | 0.53 | -0.21 | 0.65 | -3.31 | -1.54 | -0.59 | 0.91 | -0.96 | -0.59 | -0.41 | 2.57 | -0.73 | 0.75 |
AAL19684 (cydA) | -1.15 | 0.42 | 0.53 | 0.27 | 0.04 | -0.9 | -1.26 | -0.23 | 0.54 | 1.06 | -0.58 | -0.31 | 0.52 | -1.95 | 0.92 | 0.27 | -2.24 | 0.65 | 0.62 | 0.91 | -2.18 | -0.65 | 0.26 | -0.17 | -2.41 | -1.33 | 0.11 | 0.46 | 0.73 | -3.93 | 0.15 | 0.16 | 0.35 | 0.44 | -2.63 | -0.1 | 0.08 | -0.3 | 0.27 |
AAL19685 (cydB) | -1.1 | 0.44 | 1.31 | 0.33 | -0.01 | -0.37 | -1.27 | -0.09 | 0.52 | 1.05 | -1.01 | 0.27 | 1.15 | -1.26 | 0.91 | 0.26 | -3.2 | -0.1 | -0.2 | 0.3 | -1.74 | -1.18 | -0.08 | 0.06 | -2.26 | -1.21 | 0.26 | 0.11 | 0.6 | -4.03 | 0.47 | 0.29 | 0.13 | -0.05 | -3.5 | 0.14 | 0.23 | -0.07 | 0.06 |
AAL19687 (ybgE) | -0.57 | 0.82 | 0.53 | -0.01 | 0.03 | -0.78 | -0.96 | -0.31 | -1.01 | 0.58 | -2.1 | -0.03 | 0.95 | -1.19 | -0.48 | 0.62 | -3.0 | -0.29 | 0.11 | 0.1 | -0.98 | 1.06 | 0.41 | 0.35 | -1.08 | -1.59 | 0.58 | 0.42 | 1.14 | -2.09 | -1.01 | 0.25 | 0.81 | 0.25 | -2.73 | 0.21 | 0.39 | -1.15 | 0.4 |
AAL19899 (dmsA) | -2.64 | 0.17 | -0.92 | 0.19 | -1.18 | -3.7 | -3.15 | -0.32 | 0.01 | 1.44 | -0.11 | 1.12 | -0.09 | -4.8 | 2.22 | 0.34 | -5.26 | 1.06 | 0.88 | 1.41 | -5.21 | -4.4 | 1.1 | -0.3 | -4.29 | -5.15 | -1.37 | 1.81 | -2.96 | -7.2 | 1.07 | -0.63 | -3.53 | 1.09 | -5.22 | -1.17 | -0.58 | -1.47 | -0.66 |
AAL19900 (dmsB) | -2.56 | 0.26 | -1.3 | 0.56 | -2.23 | -4.04 | -2.76 | -0.21 | -0.47 | 1.34 | -0.93 | 1.53 | -0.42 | -4.53 | 2.15 | -0.63 | -5.67 | 1.85 | 1.68 | 2.13 | -4.97 | -5.7 | 0.23 | -0.24 | -4.25 | -5.0 | -1.59 | 1.6 | -2.94 | -8.64 | 0.85 | -1.69 | -3.64 | 0.1 | -4.95 | -2.32 | -0.05 | -3.07 | -0.99 |
AAL19901 (dmsC) | -2.05 | 0.52 | -1.68 | -0.6 | -3.1 | -4.39 | -2.59 | -0.51 | -0.55 | 0.66 | -1.14 | 2.02 | -0.69 | -2.87 | 1.23 | 0.51 | -4.49 | 1.28 | 0.95 | 1.55 | -0.1 | -1.29 | 1.21 | 0.51 | -1.4 | -4.26 | -0.81 | 1.74 | -1.94 | -7.86 | 0.88 | -2.35 | -2.45 | 0.78 | -3.75 | -1.53 | 1.11 | -3.1 | -1.44 |
AAL20353 (sodB) | -0.96 | 0.04 | 0.62 | -0.08 | 0.02 | -4.72 | -0.21 | -0.42 | -0.42 | 1.38 | -1.16 | -1.14 | 0.56 | -3.34 | 0.7 | 0.7 | -0.87 | 0.53 | 0.66 | 0.95 | -3.79 | -1.06 | 1.51 | -1.12 | -1.48 | -1.89 | -1.21 | 0.79 | -0.7 | -1.78 | 1.21 | 0.09 | -0.55 | 1.3 | -1.35 | -1.0 | -1.87 | 0.4 | 0.21 |
AAL20411 (STM1492) | -1.02 | 0.03 | 1.14 | -0.91 | -0.96 | -2.45 | 1.26 | -0.72 | -1.84 | -1.16 | -0.87 | -3.37 | 0.83 | -0.77 | -2.45 | 0.51 | -2.54 | 0.01 | -0.46 | -0.29 | -1.74 | 0.0 | -2.38 | 3.16 | -1.15 | -0.44 | -2.33 | -0.11 | -1.84 | -3.13 | -0.15 | -1.14 | -1.8 | -0.14 | -1.12 | -1.84 | 2.3 | 0.2 | -1.03 |
AAL20473 (STM1555) | -0.6 | 0.9 | 0.37 | -0.84 | 0.11 | -2.02 | -1.34 | 0.49 | -1.05 | 0.36 | -0.32 | -0.54 | 0.42 | 1.26 | -0.21 | 0.97 | -0.97 | -0.13 | -0.22 | 0.17 | -1.08 | 0.28 | 1.3 | -1.12 | -0.02 | 0.37 | -0.59 | 0.22 | -0.43 | -2.55 | -0.03 | 0.25 | -0.29 | 0.59 | -0.98 | -0.69 | -0.76 | 0.16 | 0.41 |
AAL20650 (ompW) | -0.87 | 0.09 | 1.32 | -1.27 | -2.45 | -4.09 | -3.05 | -0.81 | -0.81 | -1.37 | -1.08 | 0.16 | 1.63 | -5.57 | 0.92 | 0.8 | -3.15 | 1.2 | 1.05 | 1.76 | -5.07 | -4.52 | 2.05 | -1.85 | -4.04 | -3.59 | -0.5 | 1.44 | -1.32 | -8.05 | 1.22 | -1.66 | -0.93 | 1.63 | -4.72 | -0.28 | -2.12 | -1.34 | -2.29 |
AAL20934 (cbiT) | -1.87 | 0.34 | -0.19 | 0.36 | -0.93 | -2.48 | -3.49 | 0.01 | -0.96 | 1.01 | -1.38 | 1.35 | 0.79 | -2.38 | 3.04 | -0.63 | -2.76 | -1.04 | -1.6 | -0.89 | -2.88 | -2.71 | 0.93 | -0.52 | -2.49 | -2.53 | -0.14 | 1.37 | 0.54 | -6.56 | 0.1 | -0.81 | 1.08 | -0.03 | -2.49 | -2.91 | 0.13 | -1.29 | -0.04 |
AAL20935 (cbiE) | -2.1 | 0.56 | -0.05 | 0.48 | -0.53 | -1.8 | -3.42 | 0.36 | -0.66 | 1.1 | -1.18 | 1.41 | 0.75 | -2.28 | 2.46 | -0.92 | -2.79 | -1.13 | -1.68 | -0.89 | -2.47 | -2.83 | 0.17 | -0.58 | -2.33 | -2.2 | 0.34 | 1.64 | 0.89 | -5.27 | 0.03 | -0.37 | 1.4 | -0.51 | -3.23 | -2.24 | 0.0 | -1.26 | 0.73 |
AAL20936 (cbiD) | -1.94 | 0.16 | 0.26 | 0.45 | -0.35 | -2.13 | -3.12 | 0.28 | -0.73 | 0.8 | -1.04 | 1.06 | 0.81 | -1.74 | 2.07 | -0.23 | -2.62 | -1.06 | -1.44 | -0.72 | -2.85 | -2.1 | 1.39 | -0.51 | -2.74 | -2.2 | -0.19 | 1.41 | 0.5 | -5.36 | -0.07 | 0.01 | 0.94 | 0.54 | -2.79 | -2.23 | 0.26 | -1.04 | 1.43 |
AAL20937 (cbiC) | -1.88 | 0.46 | 0.38 | 0.35 | -0.12 | -2.16 | -3.31 | -0.27 | -0.71 | 1.1 | -1.17 | 1.12 | 0.59 | -2.31 | 1.65 | -0.33 | -2.6 | -1.35 | -1.65 | -1.08 | -2.73 | -2.28 | 1.16 | -0.77 | -1.83 | -1.97 | 0.06 | 1.2 | 0.75 | -5.7 | -0.22 | 0.47 | 1.21 | 0.34 | -3.02 | -1.91 | -0.23 | -0.89 | 1.99 |
AAL20938 (cibB) | -1.05 | 0.65 | 0.2 | 0.06 | 0.41 | -2.95 | -3.45 | -0.13 | -0.54 | 0.55 | -0.71 | 0.75 | 0.51 | -1.51 | 1.63 | -1.19 | -1.9 | -1.66 | -1.85 | -1.34 | -2.18 | -1.3 | -0.61 | 0.35 | -1.46 | -1.88 | -0.1 | 1.19 | 0.35 | -5.08 | 0.06 | 0.93 | 0.79 | -1.06 | -1.96 | -2.0 | 0.54 | -0.59 | 2.53 |
AAL20939 (cbiA) | -2.08 | -0.03 | -0.34 | 0.0 | 0.89 | -3.73 | -3.42 | -0.05 | -0.57 | 0.53 | -0.92 | 0.14 | 0.56 | -2.62 | 2.2 | -0.4 | -2.13 | -1.38 | -1.72 | -1.05 | -2.55 | -2.84 | 0.46 | -0.33 | -1.69 | -2.8 | -0.62 | 0.79 | 0.34 | -6.8 | -0.11 | 1.38 | 1.03 | 0.21 | -2.47 | -2.07 | 0.12 | -0.62 | 2.43 |
AAL21104 (lysP) | 0.06 | -0.01 | -1.24 | -0.4 | -1.33 | -1.24 | -0.28 | 1.1 | -1.25 | -1.79 | -1.96 | -0.14 | -0.36 | 2.26 | -0.53 | -1.08 | -1.05 | 1.41 | 1.53 | 1.62 | -1.65 | -1.62 | -1.56 | 0.34 | -1.4 | -0.76 | 0.38 | -0.27 | 0.62 | -2.44 | -1.09 | -1.11 | 0.78 | -1.2 | -0.78 | -0.73 | 0.75 | -1.5 | -0.15 |
AAL21185 (glpA) | -0.38 | 1.75 | -0.4 | 0.61 | -7.43 | -1.17 | -2.68 | -2.04 | 0.97 | -5.74 | 0.47 | 2.27 | 0.86 | -5.86 | 2.48 | -2.31 | -2.6 | -4.24 | -4.86 | -4.82 | -3.13 | -0.29 | -2.7 | 0.9 | -1.64 | -1.64 | -1.94 | -0.73 | -2.98 | -5.22 | 2.23 | 0.04 | -2.92 | -7.44 | -2.03 | 0.86 | 0.5 | -0.19 | -0.28 |
AAL21793 (STM2913) | -1.88 | 0.21 | 0.13 | 0.14 | -1.69 | -0.45 | -2.13 | -0.54 | -0.09 | -0.21 | -0.88 | -2.85 | -0.28 | -0.61 | -1.44 | -1.27 | 0.08 | 1.64 | 0.97 | 2.15 | -1.0 | -1.32 | -1.22 | 0.56 | -1.69 | -1.58 | -1.8 | 2.09 | -1.69 | -1.29 | -1.32 | -1.67 | -1.72 | -2.03 | 2.03 | -1.52 | 1.45 | -1.07 | -1.1 |
AAL21794 (STM2914) | -3.27 | 0.01 | 0.05 | 0.26 | -3.01 | -0.19 | -4.15 | -1.4 | -0.07 | 0.12 | -1.45 | -4.86 | -1.11 | -2.55 | -2.9 | -1.6 | 0.57 | 1.66 | 1.36 | 2.23 | -1.63 | -1.93 | -0.67 | 0.47 | -2.14 | -1.26 | -2.05 | 1.62 | -2.6 | -1.5 | -3.99 | -2.66 | -2.41 | -2.18 | 2.9 | -1.53 | 1.5 | -1.8 | -2.75 |
AAL21795 (ygbM) | -2.6 | 0.17 | 0.36 | 0.75 | -2.24 | 0.14 | -3.72 | -0.71 | 0.72 | -0.42 | -0.53 | -3.13 | -0.81 | -1.77 | -1.05 | -1.48 | 0.45 | 1.96 | 1.53 | 2.21 | -1.35 | -1.34 | -0.89 | 0.03 | -1.88 | -0.41 | -1.78 | 1.29 | -2.05 | -1.54 | -2.75 | -2.37 | -1.78 | -2.27 | 2.36 | -1.75 | 0.45 | -0.88 | -2.3 |
AAL21796 (ygbL) | -3.63 | -1.01 | -0.79 | 0.33 | -3.72 | -0.8 | -4.38 | -1.47 | -0.07 | -1.47 | -1.33 | -3.9 | -2.56 | -2.33 | -1.87 | -2.66 | 1.43 | 2.33 | 2.04 | 2.47 | -2.59 | -2.76 | -2.46 | -0.09 | -2.95 | -1.59 | -3.01 | 0.34 | -2.84 | -2.15 | -3.64 | -3.5 | -2.91 | -3.51 | 3.23 | -2.84 | 0.81 | -2.17 | -3.97 |
AAL21797 (ygbK) | -2.97 | -0.36 | 0.05 | 0.78 | -2.88 | 0.29 | -5.1 | -0.78 | 1.17 | -0.57 | -0.69 | -3.35 | 0.12 | -2.72 | -1.6 | -2.44 | 1.08 | 1.98 | 1.92 | 2.08 | -1.43 | -1.86 | -1.95 | -1.31 | -2.1 | -0.13 | -2.4 | 1.15 | -1.49 | -0.63 | -3.84 | -2.98 | -1.47 | -3.42 | 2.55 | -2.1 | -0.66 | -1.38 | -1.78 |
AAL21798 (ygbJ) | -3.07 | -0.73 | 0.06 | 0.49 | -3.2 | -0.62 | -5.31 | -1.24 | 0.77 | -1.29 | -1.5 | -4.84 | 0.61 | -2.58 | -1.89 | -3.3 | 1.13 | 2.39 | 2.09 | 2.53 | -1.25 | -2.34 | -2.76 | -1.13 | -1.82 | -0.46 | -2.67 | 1.01 | -0.57 | -1.61 | -3.92 | -2.58 | -0.48 | -4.36 | 2.21 | -2.46 | -0.5 | -2.3 | -1.05 |
AAL21839 (STM2959) | -0.58 | 0.84 | 0.61 | -0.02 | 0.93 | -1.29 | -0.49 | 0.24 | 0.07 | -0.21 | -0.48 | -0.73 | 1.03 | 0.09 | -0.27 | -0.83 | -0.71 | 0.06 | -0.38 | 0.18 | 0.63 | -0.54 | -0.58 | -0.79 | 0.59 | -1.09 | 0.32 | 1.52 | -0.41 | -3.61 | 0.1 | 0.23 | -0.54 | -1.08 | -1.31 | 0.13 | -0.5 | -0.26 | 0.73 |
AAL21840 (gudD) | -2.14 | 0.05 | -0.39 | 0.55 | 3.06 | -0.53 | -1.24 | -0.82 | 0.94 | 0.58 | -0.28 | -1.76 | -0.66 | -0.81 | 0.61 | -1.53 | 0.58 | -0.49 | -0.78 | -0.39 | -1.58 | -1.87 | 0.59 | -2.09 | -1.41 | -1.45 | 0.11 | 2.32 | -1.36 | -3.62 | -1.47 | -0.76 | -1.66 | -2.38 | -0.77 | -0.72 | -1.28 | -0.72 | 0.03 |
AAL21841 (ygcY) | -2.29 | 0.3 | -1.22 | 0.13 | 3.7 | -1.11 | -1.15 | -1.09 | 0.52 | -0.47 | 0.06 | -3.49 | -0.95 | -1.2 | 1.31 | -2.93 | 0.86 | -0.66 | -1.25 | -0.71 | -2.02 | -1.74 | 0.29 | -2.47 | -1.86 | -2.24 | -0.29 | 2.02 | -2.18 | -3.63 | -2.44 | -0.94 | -2.4 | -3.65 | -0.7 | -1.29 | -1.77 | -1.39 | 0.01 |
AAL21842 (gudT) | -2.79 | 0.53 | -1.74 | -1.17 | 4.03 | -1.75 | -1.83 | -1.67 | 0.58 | -1.02 | 0.2 | -4.46 | -1.03 | -2.39 | -0.52 | -2.61 | 0.72 | -1.36 | -1.65 | -1.1 | -2.9 | -1.6 | 2.02 | -3.98 | -2.38 | -3.0 | -0.92 | 1.71 | -3.74 | -4.85 | -2.66 | -0.82 | -3.83 | -2.47 | -0.7 | -2.07 | -2.52 | -1.35 | -0.52 |
AAL21889 (lysA) | 0.59 | -0.05 | -2.04 | -0.63 | -3.7 | -1.12 | -0.72 | 1.26 | -3.21 | -2.65 | -2.54 | -2.39 | -2.09 | 2.04 | -0.78 | -2.54 | -2.11 | 2.13 | 2.4 | 2.23 | -2.14 | -2.02 | -4.85 | -0.31 | 0.4 | -1.59 | -2.16 | 0.83 | 0.87 | -5.47 | -2.29 | -1.74 | 0.81 | -4.67 | -1.57 | -2.89 | 0.7 | -2.2 | -1.45 |
AAL22017 (hybG) | -0.88 | -0.64 | -1.91 | -0.62 | -1.75 | -3.23 | -0.68 | 0.05 | -0.75 | 0.15 | -1.21 | 0.92 | -0.72 | -1.29 | 1.86 | 0.15 | -1.44 | 1.53 | 1.03 | 1.81 | -2.99 | -1.74 | 2.13 | -0.73 | -3.17 | -2.85 | -0.8 | 0.85 | -0.58 | -3.39 | 0.05 | -1.1 | -0.44 | 1.5 | -0.73 | -2.47 | -0.09 | -2.61 | -0.97 |
AAL22018 (hybF) | -0.76 | 0.27 | -1.36 | -0.32 | -1.0 | -2.67 | -1.12 | 0.2 | -0.12 | 0.44 | -0.06 | 2.03 | 0.26 | -0.51 | 1.22 | -0.84 | -2.6 | 1.07 | 0.88 | 1.46 | -2.39 | -1.31 | 0.52 | -0.72 | -2.76 | -2.23 | -0.03 | 1.17 | 0.25 | -4.88 | 0.84 | -0.37 | 0.51 | -0.28 | -1.52 | -1.64 | -0.41 | -1.61 | -0.37 |
AAL22019 (hybE) | -0.95 | -0.19 | -1.37 | -0.24 | -1.48 | -2.69 | -2.21 | 0.07 | 0.1 | 0.78 | -0.27 | 1.85 | -0.34 | -0.94 | 1.0 | -0.1 | -3.04 | 0.36 | 0.5 | 1.08 | -3.57 | -2.09 | 1.66 | -0.39 | -3.27 | -2.15 | -0.24 | 1.17 | 0.69 | -4.53 | 0.73 | -0.68 | 0.78 | 0.98 | -2.39 | -1.72 | 0.6 | -1.85 | -0.73 |
AAL22020 (hybD) | -0.85 | 0.05 | -0.77 | -0.3 | -0.95 | -2.81 | -1.94 | -0.02 | -0.11 | 0.99 | -0.39 | 1.31 | 0.07 | -1.61 | 0.82 | 0.12 | -1.91 | 0.58 | 0.99 | 1.27 | -3.69 | -1.03 | 2.1 | -1.28 | -3.75 | -2.25 | -0.91 | 1.05 | 0.15 | -4.42 | 0.54 | -0.38 | 0.33 | 1.2 | -1.41 | -2.26 | -0.94 | -1.04 | -0.21 |
AAL22021 (hybC) | -1.25 | -0.08 | -1.0 | -0.02 | -0.84 | -2.93 | -1.71 | -0.02 | 0.11 | 1.05 | -0.28 | 1.4 | -0.28 | -1.35 | 1.26 | -0.37 | -2.05 | 0.97 | 1.06 | 1.43 | -3.65 | -1.63 | 1.6 | -0.89 | -3.5 | -2.33 | -0.57 | 0.86 | 0.46 | -5.13 | 0.66 | -0.47 | 0.46 | 0.62 | -1.39 | -1.65 | -0.5 | -1.04 | -0.1 |
AAL22022 (hybB) | -1.52 | -0.26 | -1.73 | -0.46 | -0.56 | -4.25 | -2.81 | -0.94 | -0.44 | 0.46 | -1.44 | 1.28 | -0.48 | -3.4 | 1.16 | 0.62 | -3.65 | 0.59 | 0.46 | 0.89 | -5.04 | -3.32 | 2.63 | 0.52 | -4.22 | -3.56 | -0.79 | 0.6 | 0.29 | -6.25 | 0.33 | -0.46 | 0.34 | 1.75 | -2.44 | -2.25 | 0.31 | -1.07 | 0.16 |
AAL22023 (hybA) | -1.57 | -0.83 | -2.26 | -0.18 | -1.1 | -4.28 | -2.87 | -0.8 | -0.9 | 0.51 | -2.05 | 0.46 | -0.21 | -4.7 | 1.63 | 0.68 | -4.19 | 1.58 | 1.4 | 1.76 | -5.6 | -3.72 | 2.5 | -1.64 | -5.05 | -4.47 | -1.52 | 0.39 | -0.23 | -7.0 | 0.04 | -0.85 | -0.09 | 2.09 | -3.45 | -2.75 | -0.95 | -1.29 | -0.09 |
AAL22024 (hypO) | -1.18 | -0.82 | -0.82 | -0.34 | -0.66 | -3.56 | -2.7 | -0.62 | -0.65 | 0.81 | -0.74 | 0.33 | 0.11 | -3.87 | 1.16 | 0.76 | -3.51 | 1.51 | 1.61 | 1.85 | -5.46 | -3.24 | 2.23 | -1.03 | -4.64 | -4.26 | -1.62 | 0.27 | -0.34 | -6.47 | 0.4 | -0.42 | -0.13 | 1.71 | -3.29 | -2.18 | -0.82 | -0.87 | -0.4 |
AAL22117 (tdcB) | -1.8 | -1.11 | -4.41 | 0.86 | -0.67 | -4.33 | -4.99 | 0.83 | 0.58 | -0.79 | 0.93 | -1.94 | -3.93 | -7.6 | 3.89 | -2.84 | -2.12 | -3.18 | -3.27 | -2.72 | -7.1 | -8.18 | 1.43 | -1.2 | -4.85 | -6.67 | -3.11 | 1.3 | -7.07 | -7.51 | -1.7 | 0.68 | -6.63 | -1.49 | -1.93 | -5.5 | -0.62 | -3.48 | 2.32 |
AAL22118 (tdcA) | -1.3 | -0.28 | -2.59 | -0.16 | 1.54 | -3.44 | -4.19 | 1.29 | 1.72 | 0.89 | 1.79 | -1.73 | -1.88 | -4.58 | 1.95 | -0.68 | -1.96 | -2.71 | -3.18 | -2.11 | -4.8 | -2.77 | 2.13 | -0.14 | -2.03 | -3.98 | -2.99 | 1.2 | -5.0 | -3.49 | -0.84 | 0.96 | -5.04 | 0.13 | -2.05 | -3.23 | 0.63 | -0.56 | 1.16 |
AAL22119 (garK) | -2.61 | 0.38 | -0.93 | 0.82 | 2.79 | -1.46 | -2.64 | -1.26 | 0.46 | -0.28 | -0.44 | -2.49 | -1.34 | -1.72 | 1.55 | -2.55 | 1.12 | -0.53 | -0.93 | -0.32 | -1.59 | -2.65 | -0.7 | 0.42 | -1.31 | -2.53 | -0.69 | 2.26 | -3.3 | -4.52 | -1.89 | -0.58 | -3.17 | -3.04 | -1.98 | -1.3 | 1.89 | -1.41 | 0.85 |
AAL22120 (garR) | -3.41 | -0.1 | -0.37 | 1.21 | 2.85 | -0.45 | -3.46 | -1.88 | 1.49 | 0.79 | 0.52 | -2.81 | -1.23 | -2.83 | 1.54 | -3.43 | 2.03 | -1.24 | -1.75 | -1.0 | -2.22 | -3.19 | -1.22 | -1.48 | -1.62 | -2.23 | -0.56 | 2.17 | -3.11 | -3.23 | -2.63 | -0.38 | -3.53 | -4.21 | -3.1 | -1.33 | 0.31 | -1.28 | 0.38 |
AAL22121 (garL) | -3.14 | 0.57 | -0.88 | 0.39 | 3.54 | -0.96 | -3.74 | -2.03 | 1.53 | 0.18 | 0.75 | -3.09 | -0.91 | -3.29 | 0.52 | -3.79 | 1.01 | -1.71 | -2.08 | -1.44 | -1.71 | -2.89 | -0.37 | -1.13 | -0.82 | -2.39 | -0.3 | 1.71 | -3.66 | -3.5 | -2.43 | 0.43 | -3.63 | -4.54 | -2.58 | -1.77 | 0.28 | -1.07 | 0.8 |
AAL22122 (garD) | -2.41 | 0.55 | -0.83 | 0.01 | 3.81 | -1.17 | -3.96 | -1.63 | 0.56 | -0.48 | 0.33 | -2.74 | -0.88 | -1.85 | 0.13 | -2.98 | 0.0 | -1.3 | -1.51 | -1.15 | -2.32 | -2.6 | -0.68 | -0.53 | -0.69 | -2.39 | 0.36 | 1.46 | -2.6 | -4.91 | -1.56 | 0.58 | -2.62 | -3.08 | -2.53 | -1.76 | 0.64 | -0.82 | 0.68 |
AAL22375 (malQ) | -2.09 | -0.27 | -0.0 | 0.6 | -0.4 | -2.15 | -2.09 | 0.69 | -0.54 | -1.3 | -1.1 | 0.72 | 0.11 | -1.17 | 1.65 | -1.73 | 1.72 | -1.16 | -1.2 | -0.98 | -0.69 | -1.88 | -0.62 | 1.78 | -1.2 | -1.39 | -0.99 | -0.84 | -0.61 | -4.02 | -1.68 | -1.22 | -0.91 | -2.0 | 2.78 | -1.32 | 0.96 | -0.84 | -0.2 |
AAL22376 (malP) | -3.27 | -0.98 | -1.89 | 0.68 | -1.03 | -3.61 | -2.98 | 1.31 | -0.65 | -1.98 | -1.25 | 0.31 | -1.78 | -1.69 | 2.08 | -2.67 | 2.44 | -1.67 | -1.82 | -1.59 | -3.11 | -3.04 | -0.25 | 1.62 | -3.14 | -2.98 | -2.36 | -1.84 | -1.06 | -5.53 | -2.29 | -1.59 | -1.53 | -2.18 | 3.32 | -2.8 | 0.88 | -2.35 | -0.34 |
AAL22377 (malT) | -1.49 | -0.43 | 0.42 | -0.15 | 1.77 | -2.76 | -2.06 | 0.63 | -0.01 | -0.02 | -0.48 | -0.18 | 0.74 | -0.24 | 1.07 | -0.95 | 0.85 | -1.59 | -1.76 | -0.96 | -1.56 | -2.21 | -0.9 | -0.52 | -1.51 | -1.36 | -2.49 | 0.66 | -1.05 | -3.76 | -1.07 | 1.39 | -0.37 | -0.58 | 1.65 | -1.49 | -1.16 | 0.7 | 1.89 |
AAL22452 (yhiP) | -1.2 | -0.3 | -0.69 | 0.27 | 1.37 | -2.12 | -3.21 | -1.87 | 1.05 | 0.26 | 0.6 | -1.65 | -0.27 | -3.87 | 1.44 | 0.15 | -0.17 | -0.27 | -0.23 | 0.12 | -6.07 | -1.89 | 1.07 | -0.61 | -4.57 | -2.82 | -2.15 | 1.07 | -4.37 | -3.24 | -0.46 | 1.54 | -4.45 | 1.38 | 0.66 | -1.85 | 0.01 | 0.14 | 1.73 |
AAL22653 (ilvN) | -0.26 | -0.52 | 0.26 | -0.54 | 1.13 | 0.24 | -2.38 | 0.09 | -0.33 | 0.04 | 0.02 | -2.16 | 0.0 | 0.69 | -1.6 | -0.37 | -1.06 | 0.37 | 0.56 | 0.97 | -2.23 | -1.2 | -1.33 | 0.21 | -2.2 | 0.66 | -1.84 | 0.14 | 0.57 | -2.97 | -1.64 | -0.72 | -0.34 | -1.08 | -0.59 | -1.56 | 1.27 | 2.52 | -0.69 |
AAL22654 (ilvB) | -0.54 | -0.51 | 0.21 | -0.5 | 1.08 | 0.22 | -3.36 | 0.12 | -0.35 | -0.38 | -0.09 | -3.03 | 0.18 | 0.66 | -0.81 | -1.49 | -1.68 | 1.22 | 1.3 | 1.73 | -2.75 | -1.27 | -2.74 | -0.03 | -2.3 | 1.08 | -1.93 | 0.12 | 0.3 | -4.87 | -1.99 | -0.8 | -0.35 | -2.25 | -1.08 | -1.86 | 0.68 | 2.35 | -0.49 |
AAL23051 (malG) | -0.54 | 0.17 | -0.63 | -0.09 | 0.21 | -1.17 | -0.79 | 1.21 | 0.4 | -1.67 | 0.32 | -0.8 | -0.64 | 0.76 | 1.17 | -1.81 | 1.83 | -1.65 | -1.25 | -1.28 | -0.36 | 0.76 | 0.7 | 1.12 | -0.1 | -1.18 | -1.76 | -1.14 | -0.87 | -4.08 | -2.14 | -1.04 | -0.99 | -1.98 | 2.25 | -1.69 | 0.65 | -1.97 | -0.45 |
AAL23052 (malF) | -2.28 | -0.47 | -2.25 | 0.64 | -0.36 | -3.31 | -2.8 | 1.3 | 0.38 | -1.97 | 0.08 | -0.73 | -1.71 | -1.72 | 2.46 | -2.43 | 2.08 | -2.62 | -2.75 | -2.33 | -3.14 | -2.28 | 2.12 | 1.65 | -2.49 | -3.41 | -2.09 | -2.15 | -2.54 | -4.93 | -3.28 | -1.76 | -2.91 | -0.27 | 2.42 | -2.44 | 1.06 | -2.92 | -0.45 |
AAL23053 (malE) | -4.55 | -1.88 | -3.21 | 0.75 | -0.7 | -2.9 | -6.01 | 1.81 | 0.43 | -2.07 | 0.01 | -1.71 | -2.29 | -4.34 | 2.64 | -4.66 | 2.79 | -5.58 | -5.64 | -4.89 | -7.01 | -4.01 | 1.0 | 1.09 | -5.99 | -5.37 | -3.28 | -3.73 | -4.32 | -5.21 | -4.89 | -1.96 | -5.02 | -1.92 | 3.24 | -4.1 | 0.1 | -4.53 | -0.83 |
AAL23054 (malK) | -4.92 | -1.33 | -4.98 | 0.35 | 0.4 | -3.48 | -7.73 | 1.24 | 1.1 | -3.41 | 0.42 | -0.23 | -2.81 | -3.17 | 2.82 | -5.19 | 1.84 | -6.77 | -8.1 | -7.14 | -7.31 | -5.54 | 1.18 | 2.66 | -5.51 | -5.35 | -2.7 | -3.97 | -3.24 | -6.22 | -6.16 | -1.43 | -3.75 | -1.49 | 2.12 | -2.9 | 1.19 | -5.28 | 0.64 |
AAL23055 (lamB) | -5.43 | -1.84 | -3.83 | 1.17 | 0.88 | -2.1 | -5.6 | 1.39 | 1.02 | -2.78 | -0.63 | -1.93 | -1.82 | -4.34 | 2.61 | -5.11 | 2.31 | -5.15 | -5.55 | -4.92 | -6.25 | -3.88 | 1.92 | 0.95 | -6.37 | -6.22 | -3.51 | -3.82 | -4.53 | -5.57 | -5.45 | -1.29 | -4.96 | -2.13 | 3.0 | -4.0 | -0.33 | -3.89 | 0.52 |
AAL23056 (malM) | -3.38 | -1.42 | -2.49 | 1.55 | -0.25 | -2.11 | -3.7 | 1.54 | 0.44 | -2.02 | -0.32 | -0.92 | -1.52 | -2.72 | 3.11 | -4.54 | 2.26 | -3.23 | -3.57 | -3.07 | -4.03 | -3.17 | 1.35 | 1.3 | -4.3 | -3.94 | -2.48 | -3.04 | -3.15 | -4.05 | -4.1 | -1.63 | -3.52 | -3.11 | 2.47 | -2.94 | 0.56 | -3.14 | -0.83 |
AAL23124 (fumB) | -1.88 | 0.59 | -2.55 | 1.02 | 0.86 | -3.0 | -1.01 | 0.52 | 0.22 | 0.92 | 0.5 | 1.88 | -1.55 | -2.09 | 2.52 | -0.92 | -2.48 | -1.5 | -1.47 | -1.16 | -4.19 | -2.9 | -0.18 | -0.2 | -3.54 | -2.07 | -0.26 | 0.74 | -0.15 | -4.9 | -1.19 | 0.51 | 0.28 | 0.42 | -1.77 | -1.58 | 0.45 | -2.66 | 1.35 |
AAL23125 (dcuB) | -2.16 | 0.57 | -3.13 | 0.48 | 1.7 | -2.57 | -2.63 | -0.55 | 0.63 | 0.7 | 0.71 | 1.87 | -2.76 | -3.66 | 1.84 | -0.29 | -4.65 | -3.29 | -3.44 | -2.96 | -4.33 | -3.26 | -0.09 | 0.02 | -4.01 | -2.38 | -0.69 | 0.93 | 0.08 | -4.33 | -1.74 | 1.33 | 0.5 | 1.0 | -3.99 | -2.02 | 1.04 | -3.8 | 1.78 |
AAL23126 (STM4302) | -2.94 | 0.55 | -2.0 | -0.3 | 2.56 | -2.99 | -1.0 | 0.18 | 0.73 | 1.48 | 0.96 | -0.84 | -2.61 | -8.89 | 1.06 | -0.27 | -3.89 | -4.26 | -4.25 | -4.49 | - | -6.17 | 1.37 | -0.17 | -3.86 | -3.66 | -2.52 | -0.0 | -1.52 | -1.64 | -2.88 | 2.31 | -1.31 | 0.75 | -4.85 | -3.75 | 1.66 | -4.76 | 1.32 |
AAL23148 (dcuA) | -1.47 | -0.27 | -1.08 | 0.58 | -0.12 | -1.82 | -3.16 | -1.29 | 0.03 | 1.3 | -0.45 | 1.16 | -0.07 | -4.02 | 2.29 | 0.33 | -4.43 | 0.18 | 0.12 | 0.84 | -4.3 | -2.34 | 1.93 | -0.84 | -3.77 | -2.43 | -0.72 | 0.93 | -1.49 | -5.37 | 0.14 | 0.59 | -1.48 | 1.14 | -4.31 | -1.68 | -0.41 | -1.1 | 0.96 |
AAL23149 (aspA) | -1.81 | -0.46 | -0.68 | 0.05 | 1.03 | -2.53 | -3.29 | -0.9 | 0.4 | 0.88 | 0.16 | 0.57 | -0.36 | -4.66 | 1.79 | 0.26 | -0.54 | -0.18 | -0.2 | 0.24 | -4.06 | -2.33 | 1.98 | -1.59 | -3.17 | -2.6 | -1.25 | 1.26 | -2.31 | -3.09 | 0.35 | 0.99 | -2.76 | 1.31 | 0.24 | -1.49 | -1.81 | 0.08 | 0.91 |
AAL23163 (frdD) | -1.57 | 0.36 | -0.23 | 0.59 | 0.2 | -2.6 | -3.66 | -0.92 | 0.51 | 0.56 | 0.43 | 1.92 | 0.3 | -3.81 | 0.73 | -1.16 | -4.06 | -1.28 | -1.19 | -0.79 | -5.16 | -2.49 | 0.3 | -0.01 | -4.22 | -1.79 | -0.06 | 1.42 | 1.54 | -4.77 | -0.08 | 0.39 | 1.74 | -0.32 | -3.21 | 0.1 | -0.52 | -0.71 | 0.94 |
AAL23164 (frdC) | -2.01 | 0.62 | -0.84 | 0.84 | -0.47 | -2.65 | -2.58 | -0.47 | 0.22 | 0.65 | 0.37 | 1.95 | -0.55 | -3.96 | 1.53 | -0.44 | -2.51 | -0.17 | -0.35 | 0.04 | -5.63 | -3.14 | 1.01 | -0.38 | -4.57 | -1.8 | -0.43 | 1.05 | 1.36 | -5.63 | -0.19 | -0.2 | 1.43 | 0.63 | -2.16 | -0.3 | -0.99 | -1.08 | 0.39 |
AAL23165 (frdB) | -1.98 | 0.35 | -0.42 | 0.53 | 0.05 | -2.74 | -3.34 | -0.84 | 0.55 | 0.61 | 0.57 | 1.92 | -0.13 | -4.18 | 1.46 | -0.65 | -4.21 | -0.92 | -0.71 | -0.44 | -5.86 | -2.79 | 0.86 | -0.42 | -4.81 | -1.89 | -0.44 | 1.34 | 1.15 | -4.7 | 0.07 | 0.43 | 1.37 | 0.42 | -3.81 | -0.34 | -1.07 | -0.61 | 1.02 |
AAL23282 (STM4463) | -1.27 | -1.52 | -3.12 | -2.07 | -3.76 | -4.67 | -4.22 | -2.22 | -1.89 | -0.48 | -1.6 | -4.45 | -2.96 | -3.99 | -1.13 | -1.92 | -2.05 | 3.21 | 2.57 | 3.69 | -3.84 | -2.15 | -1.56 | -0.83 | -3.65 | -3.73 | -3.83 | 1.53 | -5.33 | -3.84 | -0.68 | -2.85 | -4.92 | -1.7 | -1.81 | -3.56 | -0.29 | -3.85 | -3.03 |
AAL23283 (STM4464) | -0.65 | -1.49 | -2.84 | -2.1 | -3.35 | -5.2 | -2.64 | -2.14 | -1.49 | -0.98 | -1.37 | -3.81 | -2.41 | -2.34 | -1.46 | -4.31 | -2.32 | 3.15 | 2.48 | 3.51 | -3.84 | -3.04 | -2.57 | -0.73 | -3.36 | -3.66 | -3.39 | 1.99 | -3.75 | -6.09 | 0.83 | -2.56 | -3.61 | -3.93 | -1.9 | -3.6 | -0.21 | -3.62 | -1.92 |
AAL23284 (STM4465) | -1.28 | -3.19 | -6.52 | -2.49 | -5.88 | -6.44 | -7.77 | -4.57 | -1.96 | -1.2 | -1.99 | -7.86 | -4.55 | -7.22 | -2.31 | -5.94 | -7.12 | 3.22 | 2.82 | 3.75 | -6.93 | -6.53 | -3.03 | -1.79 | -6.51 | -7.45 | -4.96 | 2.13 | -7.67 | -8.85 | 0.53 | -4.06 | -7.7 | -4.72 | -6.01 | -6.11 | -0.9 | -6.83 | -2.99 |
AAL23285 (STM4466) | -0.55 | -2.32 | -4.32 | -1.74 | -3.2 | -5.33 | -6.4 | -3.94 | -1.2 | -0.5 | -0.97 | -5.07 | -2.95 | -4.84 | -1.0 | -5.36 | -5.22 | 3.21 | 2.06 | 3.64 | -5.91 | -4.88 | -3.08 | -2.06 | -5.34 | -5.6 | -3.55 | 2.5 | -5.14 | -7.91 | 0.75 | -1.65 | -5.04 | -4.48 | -5.69 | -4.13 | -1.67 | -4.59 | -1.0 |
AAL23286 (STM4467) | -1.05 | -2.29 | -4.72 | -1.71 | -1.42 | -4.91 | -8.4 | -3.59 | -1.42 | -0.29 | -1.26 | -8.23 | -2.72 | -7.95 | -0.79 | -3.88 | -7.8 | 3.04 | 1.98 | 3.62 | -5.91 | -6.05 | -1.07 | -1.07 | -4.99 | -8.66 | -4.23 | 2.41 | -8.22 | -9.04 | 0.93 | -0.92 | -7.25 | -2.68 | -8.02 | -5.71 | -0.08 | -3.0 | -0.89 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.