Heatmap: Cluster_24 (HCCA)

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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL16933 (BN171_1010004)
-0.11 1.07 -0.41 0.11 -0.34 -1.11 1.5 0.03 -0.06 1.27 0.74 1.06 -0.54 -2.17 -0.94 0.1 -1.21 -1.56 -0.52 0.31 -0.3 -0.79 -0.64 0.15 0.19 -0.46 -1.12 -1.35 -0.25
CCL17019 (BN171_1080011)
-1.34 -0.47 -0.61 0.48 0.2 0.08 1.45 -1.02 -0.9 1.85 0.92 0.88 -0.38 -1.69 -1.19 -0.1 -0.3 -1.53 -0.86 0.39 -0.36 0.21 -0.89 -0.39 -0.22 -0.82 -0.27 0.21 -1.27
CCL17143 (BN171_1330004)
-3.07 -2.88 -2.17 -1.8 -1.66 -1.1 0.74 -2.97 -1.17 1.83 1.3 1.75 0.88 -1.86 -1.88 1.44 -0.76 -1.78 -0.37 -1.43 0.02 -0.66 -1.14 -0.49 0.38 -1.99 -2.7 -0.05 1.69
CCL17144 (BN171_1330005)
-4.62 -7.16 -2.24 -2.32 -2.23 -1.01 0.78 -5.47 -1.81 2.09 1.8 1.98 0.91 -2.78 -2.9 1.58 -1.27 -2.92 -0.56 -2.55 -1.31 -0.25 -1.39 -0.99 0.06 -3.6 -2.63 0.0 1.65
CCL17288 (rnfD)
-1.62 -0.97 -1.65 -1.43 -1.82 -2.28 0.82 -1.93 -3.04 1.61 1.78 1.29 0.31 -2.12 -0.25 0.93 -0.76 -0.74 -0.92 -2.33 -0.2 1.44 -1.98 -1.65 -0.3 -2.96 -2.0 0.01 1.78
CCL17290 (rnfE)
-1.56 -0.72 -1.77 -1.38 -1.64 -1.78 0.55 -1.31 -3.43 1.3 1.6 1.04 0.6 -1.61 -0.02 1.38 -0.67 -0.6 -1.01 -2.09 0.05 0.67 -2.32 -1.49 0.19 -2.6 -1.29 0.67 1.73
CCL17291 (rnfA)
-1.52 -0.4 -0.82 -0.79 -0.66 -1.31 0.6 -1.16 -3.6 1.6 1.65 1.16 0.19 -1.29 0.23 1.0 -0.45 -0.41 -0.97 -1.31 0.29 0.5 -2.35 -1.9 -0.19 -1.77 -1.66 0.27 1.23
CCL17299 (minC)
-1.41 -1.68 -1.29 -1.35 -1.82 -0.49 2.6 -2.26 -3.44 2.46 0.65 1.54 -0.01 -1.32 -1.3 -0.4 -1.58 -1.59 -1.3 -1.03 -1.24 0.92 -1.55 -0.76 -0.62 -2.04 -0.8 -1.54 -0.02
CCL17413 (brnQ)
-7.08 -2.38 -7.11 -4.74 -7.39 -9.15 3.69 -7.53 -6.11 3.24 -0.58 2.06 -4.76 -7.64 -5.38 -6.27 -6.42 -7.33 -5.76 -8.34 -3.6 -3.06 -7.14 -6.54 -6.64 -8.66 0.05 -3.97 -4.78
CCL17438 (BN171_1500014)
-0.71 -0.95 -0.21 -0.27 -0.6 -1.9 2.42 -1.09 -1.18 1.78 1.1 1.46 0.48 -0.72 -0.9 0.31 -0.38 -0.7 -1.2 -2.1 -2.15 -0.54 -0.56 -1.99 -2.33 -2.59 -1.64 -0.44 0.66
CCL17441 (codY)
-1.9 -4.21 -1.88 -2.55 -2.16 -2.12 0.33 -3.53 -3.33 3.38 2.94 1.94 -1.67 -1.72 -3.67 -1.15 -2.26 -2.17 -2.51 -1.5 -3.88 -1.73 -2.56 -1.92 -1.64 -2.69 -1.34 -2.36 -1.33
CCL17508 (exoA)
-0.03 1.0 0.23 0.59 -0.05 -1.94 1.51 0.44 -1.04 1.12 1.05 1.59 -0.41 -1.99 0.19 -1.69 -0.49 0.15 -1.62 -2.01 -2.24 -2.87 -0.52 -0.68 -2.54 -2.7 -3.03 -0.0 1.15
CCL17509 (BN171_1520027)
-1.17 -2.32 -1.29 -1.62 -1.59 -2.25 1.31 -2.96 -0.65 2.16 1.53 2.05 0.39 -1.25 -2.01 -0.0 -0.69 -1.54 -0.51 -1.17 -1.91 -1.58 0.24 -0.08 -0.94 -2.33 -2.58 -0.03 1.4
CCL17566 (BN171_1560004)
-5.9 -6.06 -4.93 -4.96 -5.99 -2.48 2.14 -6.31 -3.94 2.53 1.76 1.59 0.41 -4.78 -6.06 0.32 -2.13 -6.4 -1.34 -5.28 -4.31 -3.43 0.14 -2.06 -2.31 -6.96 -0.93 1.48 1.9
CCL17614 (BN171_1640004)
-0.5 0.11 -0.32 1.74 -1.87 -0.6 2.32 -1.86 -0.32 1.74 0.96 0.71 -0.5 -0.91 -0.21 -0.2 -1.12 -2.15 -0.94 -0.59 -0.66 -2.88 -0.79 -0.8 -1.21 -1.63 -1.57 -1.08 -0.27
CCL17817 (BN171_1810024)
-0.86 -1.8 -0.95 -1.37 -1.45 -1.21 2.12 -2.44 -0.3 1.95 0.85 1.48 -0.78 -2.62 -3.32 -0.45 -0.93 -2.88 -0.03 -0.56 -2.37 1.28 -0.33 0.62 -0.46 -2.12 0.62 -1.81 0.04
CCL17870 (BN171_1900002)
-0.29 -1.53 0.06 -0.83 -0.42 -2.1 2.47 -0.04 -0.78 1.19 0.05 0.19 -0.25 -0.12 -2.38 0.33 -0.12 -0.76 -0.93 0.2 -1.51 -1.97 -0.0 -0.42 -0.24 -1.12 -3.99 1.51 -0.44
CCL17872 (BN171_1900004)
-1.83 -1.3 0.38 1.43 0.16 -1.65 2.02 -1.68 -1.07 1.04 0.67 0.47 -0.1 -1.21 -1.22 -0.32 -1.11 -1.25 -0.37 -1.2 -0.39 -2.26 -0.24 -0.55 -0.84 -2.05 -2.12 1.71 0.59
CCL18004 (BN171_2000007)
0.31 -2.76 -0.03 -0.74 -0.94 -0.75 0.7 -1.59 -3.81 1.43 1.79 1.52 -0.12 1.09 -1.78 0.58 -1.39 -0.59 -1.84 -0.42 -0.02 -4.53 -1.44 -1.64 -0.33 -1.5 -3.33 -0.65 1.75
CCL18005 (BN171_2000008)
-1.39 -0.31 -1.24 -0.93 -1.03 -0.7 2.31 -1.24 0.12 2.23 1.33 0.93 -0.73 -1.61 -2.01 -0.22 -0.94 -1.57 -0.84 -0.79 -1.09 -1.75 -0.6 0.29 -0.8 -1.47 -1.37 -0.25 0.43
CCL18006 (BN171_2000009)
-1.59 -1.11 -1.4 -0.94 -1.36 -0.3 2.06 -2.21 0.17 2.19 1.28 0.94 -0.35 -1.62 -2.34 0.08 -0.38 -1.81 -0.56 -1.03 -0.82 -1.9 -0.22 0.71 -0.64 -1.54 -0.59 0.21 -0.05
CCL18044 (BN171_2050004)
-3.16 -2.56 -3.69 -2.54 -4.24 -3.02 3.83 -5.6 -1.64 2.8 0.35 0.73 -2.46 -5.16 -5.25 -2.58 -1.75 -5.45 -1.5 -2.87 -2.66 -3.56 -2.19 -1.45 -1.97 -4.79 -0.37 -1.88 -1.05
CCL18045 (cwp)
-1.8 -1.07 -1.72 -0.89 -1.77 -2.46 3.44 -2.69 -1.26 2.58 0.25 1.21 -1.5 -2.31 -2.99 -1.47 -0.82 -2.25 -0.62 -1.87 -1.6 -2.34 -1.31 -0.92 -1.53 -2.63 -0.23 - -1.05
CCL18248 (BN171_2190008)
-1.97 -4.09 -1.72 -2.37 -2.12 -0.33 1.24 -3.07 -1.37 2.59 2.23 1.49 0.13 -2.39 -4.27 0.91 -0.84 -3.44 -0.85 -1.36 -2.19 - -0.58 -3.06 -1.89 -2.78 -3.73 0.69 1.51
CCL18345 (ilvD)
-2.14 -0.28 -2.05 -0.3 -1.92 -2.1 2.71 -2.31 -1.2 2.36 0.38 1.81 -1.12 -3.28 -1.92 -0.71 -1.4 -2.31 -0.61 -1.21 -0.52 0.66 -1.59 -0.66 -1.07 -2.04 0.6 -2.01 -1.1
CCL18417 (pyrD)
-0.92 -0.45 -0.68 0.11 -0.5 -0.77 1.16 -1.05 -0.22 0.51 0.47 0.88 0.36 -0.52 0.16 0.3 0.03 -0.43 -0.58 -0.19 -0.37 1.23 -0.49 -1.16 -0.82 -0.67 -1.19 0.25 0.82
CCL18418 (BN171_2310003)
-2.15 -1.42 -1.87 -0.24 -1.63 -1.79 1.38 -1.78 0.4 1.42 0.97 1.29 0.86 -1.48 -0.46 0.22 -0.22 -1.22 -0.58 -2.1 -1.11 1.04 -0.7 -1.13 -1.04 -2.73 -1.15 0.36 1.64
CCL18419 (xdhA)
-1.46 -0.87 -0.88 -0.14 -1.06 -1.72 1.71 -1.24 -0.4 1.35 1.09 1.2 0.56 -1.65 -0.21 0.0 -0.37 -0.66 -0.76 -1.36 -1.3 1.17 -0.48 -1.05 -1.16 -2.01 -1.08 0.23 1.13
CCL18420 (BN171_2310005)
-1.52 -0.87 -0.34 -0.21 -0.37 -1.11 1.61 -1.31 -2.07 1.89 1.17 1.36 0.45 -1.41 -0.49 0.28 -0.29 -0.77 -0.7 -1.95 -1.6 0.75 -0.81 -1.85 -1.62 -2.51 -1.81 0.52 0.99
CCL18421 (xdhC)
-0.3 0.1 0.29 0.2 -0.02 -1.97 1.89 -0.23 -1.57 0.38 0.47 0.93 0.15 -1.24 0.69 0.27 -0.49 -0.41 -0.83 -1.18 -1.59 1.15 -1.12 -1.79 -1.84 -1.72 -1.85 -0.15 1.1
CCL18422 (BN171_2310007)
-0.75 -0.53 -0.55 -0.49 -0.55 -1.42 1.63 -0.77 -2.02 1.37 1.27 0.97 0.25 -1.58 -0.43 0.47 -0.78 -0.25 -0.69 -1.37 -1.37 1.56 -0.73 -2.27 -1.43 -1.96 -1.47 0.54 0.75
CCL18423 (BN171_2310008)
-1.0 -1.28 -0.48 -0.19 -1.03 -1.62 1.84 -1.98 -2.8 1.28 1.21 0.95 0.32 -1.04 -0.85 0.29 -1.13 -0.94 -0.21 -0.66 -0.56 1.16 -0.23 -1.74 -1.41 -1.79 -1.21 0.58 1.26
CCL18442 (BN171_2340002)
-0.54 -0.36 -0.54 0.07 -0.04 -0.05 0.07 -0.1 -1.5 0.9 0.61 0.58 0.47 -0.92 -0.73 1.33 -0.09 -0.03 -0.34 -0.52 -0.99 1.4 -1.58 -1.4 -0.39 -0.3 -0.32 0.33 -0.52
CCL18443 (BN171_2340003)
-0.88 -1.17 -0.73 -0.76 -0.46 -0.51 1.25 -0.63 -1.3 1.3 0.98 0.73 0.37 -0.87 -1.09 0.99 -0.55 -0.3 -0.48 -0.81 -1.24 1.15 -1.3 -1.27 -0.02 -1.12 -0.51 0.49 0.83
CCL18444 (xdhC)
-1.33 -2.1 -1.45 -0.55 -1.82 -0.68 1.68 -1.84 -1.16 1.33 0.75 1.28 0.68 -1.57 -1.54 1.38 -0.6 -1.22 -0.56 -1.24 -0.41 0.72 -1.56 -1.38 0.19 -1.36 -0.0 0.96 0.23
CCL18445 (BN171_2340005)
-0.7 -0.46 -1.03 0.02 -0.75 -0.57 1.43 -1.22 -1.6 0.76 0.51 1.27 0.22 -1.11 -0.38 0.61 -0.68 -0.66 -0.31 -0.53 -0.26 1.21 -1.45 -1.6 -0.68 -1.27 -0.71 0.91 0.89
CCL18543 (BN171_2420010)
-2.57 -1.75 -2.32 -2.02 -2.77 -1.31 1.56 -2.62 0.72 1.71 1.56 1.42 0.28 -2.19 -1.85 0.15 -0.29 -2.22 0.0 -1.79 -1.71 -5.39 -0.56 -1.94 -1.74 -2.45 0.3 1.17 1.81
CCL18557 (BN171_2430003)
-0.07 -1.75 -0.27 -1.15 -0.34 -1.04 0.17 -1.54 0.3 1.48 1.79 1.89 0.34 -0.31 -2.18 0.92 -0.93 -0.78 -0.82 -0.49 -1.83 -0.49 0.14 -0.88 -0.72 -1.63 -1.89 -1.92 0.92
CCL18559 (BN171_2430005)
-0.24 -4.26 -0.26 -4.49 0.89 -2.25 -0.53 -0.28 -4.78 1.77 2.14 2.54 -0.28 -0.21 -2.94 0.62 -0.32 0.16 -2.57 -1.65 -4.22 -3.22 -3.62 -4.75 -2.57 -1.15 -6.0 -0.89 1.46
CCL18659 (BN171_2480034)
-1.71 -0.9 -1.13 0.99 -0.28 -0.74 0.82 -1.13 -1.27 1.67 1.38 2.07 0.21 -1.71 -0.29 0.75 -0.62 -0.76 -1.81 -0.9 -0.96 -0.92 -4.0 -0.68 -0.25 -1.1 -1.59 -0.17 0.48
CCL18756 (BN171_2600015)
-4.17 -3.59 -4.75 -4.42 -5.11 -4.59 1.91 -3.2 -1.85 2.58 2.19 2.57 0.29 -3.36 -3.55 -0.85 0.4 -3.95 -3.67 -5.05 -2.7 -0.95 -4.01 -0.13 -0.48 -4.39 0.47 -2.64 -0.54
CCL18794 (BN171_2620017)
-6.01 -5.82 -5.71 -7.06 -5.12 -0.36 1.9 -4.82 -1.81 2.33 1.81 1.75 0.96 -4.82 -6.47 1.43 -0.42 -5.12 -1.4 -3.32 -3.84 -2.66 -0.58 -1.76 -0.96 -5.25 -4.72 0.7 1.51
CCL18795 (BN171_2620018)
-2.03 -3.46 -0.62 -2.12 -0.45 -0.6 1.77 -2.34 -2.66 0.99 1.76 1.41 0.69 -0.66 -2.66 1.55 -0.02 -1.41 -1.5 -0.49 -1.84 -4.55 -1.32 -2.89 -0.14 -1.5 -3.55 0.33 1.74
CCL18853 (BN171_2690010)
-0.68 -0.49 -0.89 -0.54 -0.9 -0.48 1.74 -0.88 0.11 1.37 1.17 1.15 0.11 -0.6 -0.56 -0.17 -0.61 -0.73 -0.26 -0.15 -0.44 -0.36 0.05 -1.2 -0.77 -0.78 -1.84 -0.71 0.88
CCL19102 (BN171_2870032)
-1.02 -1.33 -1.32 -1.43 -0.98 -1.58 2.94 -1.83 -1.35 1.83 1.21 1.44 -0.29 -1.97 -1.43 -0.4 -2.06 -1.15 -0.54 -0.86 -1.66 -0.29 -0.45 -2.32 -1.54 -0.98 -0.78 -1.65 0.68
CCL19161 (BN171_2900016)
-0.93 -2.17 -0.87 -1.07 -0.95 -0.95 1.39 -1.97 0.13 1.8 1.3 1.66 0.51 -1.79 -2.84 1.19 -0.74 -2.06 -0.72 -0.78 -1.6 0.22 -0.97 -0.23 -0.32 -2.04 -0.79 0.01 0.56
CCL19162 (BN171_2900017)
-2.83 -3.11 -3.49 -2.9 -3.3 -4.4 2.96 -3.47 -4.76 2.69 2.22 2.13 -2.61 -3.43 -3.04 -2.06 -3.02 -3.43 -2.46 -3.36 -3.21 -3.54 -2.23 -4.04 -3.76 -3.79 -4.14 -4.94 1.66
CCL19163 (BN171_2900018)
-3.01 -3.34 -3.0 -2.62 -3.31 -4.82 3.0 -3.15 -4.79 2.8 2.3 2.13 -3.01 -4.22 -3.3 -2.99 -3.53 -3.09 -2.87 -4.09 -2.55 -3.57 -2.51 -5.18 -4.86 -4.04 -4.58 -3.79 1.31
CCL19164 (BN171_2900019)
-4.71 -4.6 -3.66 -3.43 -3.87 -6.52 3.08 -4.8 -6.85 2.55 2.14 2.13 -3.25 -4.75 -4.3 -3.41 -3.35 -4.69 -2.94 -5.07 -3.58 -4.0 -3.38 -5.0 -5.35 -4.88 -4.5 -1.92 2.1
CCL19168 (BN171_2910003)
-2.12 -4.05 -1.46 -1.54 -1.62 -0.17 1.45 -3.91 -1.07 2.1 1.49 1.77 0.79 -0.85 -2.55 1.34 -0.59 -2.12 -0.6 -1.88 -2.82 -0.72 -0.14 -1.88 -0.93 -3.48 -4.08 0.45 1.17
CCL19797 (hydA)
-2.04 0.19 -1.57 -0.08 -2.16 -0.98 2.14 -2.62 -2.47 2.01 1.05 1.6 -0.31 -3.29 -0.49 -0.36 -1.67 -2.97 0.2 -1.4 0.23 1.51 -0.95 -1.44 -1.37 -2.22 -1.58 -2.22 0.38
CCL19800 (fdhD)
-2.9 -1.24 -1.94 -0.69 -2.67 -1.86 2.38 -4.46 -1.28 2.62 1.45 2.03 -0.2 -3.98 -1.56 -0.61 -1.34 -3.97 -0.42 -1.56 0.25 -0.74 -1.49 -2.23 -1.7 -3.06 -2.22 -2.51 0.88
CCL20172 (BN171_3740001)
-4.16 -4.32 -3.25 -3.88 -3.7 - 1.55 -4.06 -2.98 2.71 2.51 2.13 0.35 -4.57 -4.36 0.37 -1.62 -3.55 -5.54 - - - - - - - - - 2.53

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.