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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19953 (STM1019) | -0.05 | 0.1 | 1.08 | 0.28 | 0.56 | -1.1 | -0.58 | -1.2 | -0.61 | -0.05 | 0.67 | -1.28 | 0.66 | -2.46 | -1.23 | -10.42 | -2.89 | -1.38 | -0.99 | -0.91 | -0.22 | -1.37 | - | -2.07 | 0.55 | -0.44 | -2.32 | 2.03 | 1.9 | 1.33 | 0.01 | 0.23 | 1.42 | - | -1.5 | -2.14 | -0.7 | 1.02 | -0.11 |
AAL21515 (STM2621) | -0.05 | 0.1 | 1.08 | 0.28 | 0.56 | -1.1 | -0.58 | -1.2 | -0.61 | -0.05 | 0.67 | -1.28 | 0.66 | -2.46 | -1.23 | -10.42 | -2.89 | -1.38 | -0.99 | -0.91 | -0.22 | -1.37 | - | -2.07 | 0.55 | -0.44 | -2.32 | 2.03 | 1.9 | 1.33 | 0.01 | 0.23 | 1.42 | - | -1.5 | -2.14 | -0.7 | 1.02 | -0.11 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.