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Heatmap: Cluster_31 (HCCA)

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Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL17203 (mreB)
 126.96 56.16 150.87 65.57 157.49 284.98 180.76 119.02 44.61 229.17 163.8 192.09 159.28 125.46 92.55 213.97 85.9 146.32 278.64 157.54 70.49 294.23 162.45 79.86 139.74 126.13 65.16 71.92 150.91
CCL17204 (fabZ)
 290.67 129.38 257.12 132.34 220.36 358.54 244.07 229.62 61.96 247.8 222.11 236.9 350.46 193.82 179.72 492.85 200.47 291.34 438.83 279.77 126.14 690.36 239.84 175.05 342.77 222.66 280.75 164.82 215.65
CCL17701 (BN171_170002)
 7.85 4.79 8.44 7.58 12.82 36.67 32.26 7.58 12.54 34.18 46.54 41.67 72.24 8.36 7.34 139.83 43.83 16.29 78.15 9.2 8.47 12.81 123.96 64.95 92.02 8.41 11.42 66.28 38.45
CCL17702 (BN171_170003)
 15.69 9.79 19.72 13.56 33.84 41.03 45.67 20.28 19.26 68.21 71.61 74.49 73.23 23.32 13.81 119.89 42.68 31.33 68.34 32.88 11.91 17.15 101.16 41.24 54.81 23.3 7.08 43.69 54.85
CCL19486 (anmK)
 13.77 11.49 26.76 42.1 36.92 7.07 16.58 15.96 4.39 21.72 20.6 18.04 19.37 18.09 17.35 16.48 6.31 23.0 27.78 13.36 7.32 4.21 35.4 9.8 11.13 10.59 0.81 8.39 16.67
CCL19487 (BN171_3180011)
 7.79 3.17 19.57 10.92 18.51 9.15 9.29 7.36 2.51 12.18 13.17 17.16 14.58 7.23 4.08 18.03 6.3 8.19 21.48 10.3 3.67 3.14 39.35 5.66 5.62 6.78 0.95 9.11 14.48
CCL19488 (BN171_3180012)
 16.73 16.29 37.1 22.18 28.74 30.27 23.01 25.81 12.51 23.53 23.85 32.72 26.3 30.3 14.62 27.43 11.9 14.57 38.24 16.67 4.83 2.18 68.23 8.77 7.41 8.64 1.55 17.61 23.6
CCL19489 (BN171_3180013)
 17.96 6.49 13.41 7.18 13.69 13.46 15.46 13.62 6.26 14.17 12.38 16.4 17.73 13.37 5.29 24.03 10.24 15.05 32.16 10.79 4.32 4.19 60.28 10.71 12.84 6.27 5.84 13.78 12.23
CCL19490 (BN171_3180014)
 8.09 3.8 6.98 5.44 9.41 6.7 5.83 7.98 3.96 12.08 8.27 9.92 9.23 8.52 4.8 9.3 8.88 9.38 25.11 8.57 3.94 3.96 42.16 17.39 7.53 6.2 8.69 5.95 7.95
CCL19656 (BN171_3350005)
 27.84 20.42 43.34 39.83 30.84 32.2 39.55 17.69 10.83 30.32 20.4 26.0 23.15 19.44 18.44 24.12 8.39 23.07 40.76 22.86 17.25 7.27 43.61 16.38 28.71 17.8 4.78 17.55 13.0
CCL19672 (hslO)
 43.85 26.22 55.72 112.11 81.02 67.77 79.68 43.47 14.08 52.05 64.89 64.72 96.52 38.67 33.72 79.19 63.77 55.1 98.05 37.02 27.95 114.8 80.8 33.81 50.34 43.47 51.95 49.75 59.94
CCL19750 (pstS)
 73.24 24.33 123.61 156.27 94.46 102.77 91.7 45.88 39.44 100.56 108.63 76.72 237.65 106.97 27.19 238.85 100.73 56.75 217.04 93.84 47.31 134.12 316.04 104.33 108.57 28.22 72.38 115.71 75.53
CCL19751 (BN171_3450005)
 68.53 26.29 98.28 146.74 86.53 47.14 77.81 52.77 32.15 75.08 76.43 63.97 163.41 59.61 29.25 165.32 58.44 59.42 144.78 56.92 50.66 75.07 198.91 67.63 68.76 35.27 45.61 62.96 63.58
CCL19752 (BN171_3450006)
 17.93 4.85 30.06 46.68 21.49 49.51 12.3 6.78 19.67 17.95 16.62 13.5 69.01 13.16 5.37 50.58 26.52 8.63 103.83 17.81 16.9 30.05 148.11 25.39 39.04 10.81 12.88 31.59 12.51
CCL19785 (BN171_3470023)
 0.0 0.0 0.0 0.0 0.0 0.66 0.0 0.0 24.48 15.9 41.76 39.62 25.42 0.0 0.0 0.01 24.49 0.0 108.72 0.0 0.0 0.0 250.14 0.0 0.0 0.0 0.7 8.35 0.0
CCL19838 (pyk)
 422.73 33.23 322.9 49.65 600.76 835.75 193.34 410.14 181.22 205.05 183.85 251.34 903.86 347.44 56.98 1367.74 368.66 716.86 1190.05 642.18 42.0 992.75 1593.22 1047.82 718.24 717.27 155.97 222.74 176.22
CCL19839 (pfkA)
 279.45 21.97 209.86 27.56 423.78 1371.75 112.1 323.69 142.79 110.65 97.6 153.01 554.79 213.29 36.88 751.71 262.32 447.88 861.17 413.86 19.87 760.07 979.52 566.67 366.42 440.85 77.21 124.88 100.32
CCL19861 (BN171_3570010)
 5.19 3.21 7.68 14.74 9.32 4.9 5.24 4.21 10.9 7.15 9.08 8.87 14.42 4.6 3.75 13.35 8.75 5.54 20.01 9.41 5.06 4.85 29.36 11.16 9.19 5.58 2.65 10.44 9.05
CCL19879 (BN171_3580014)
 7.04 4.39 21.06 7.01 28.98 78.61 84.19 7.6 11.71 175.37 152.99 136.32 100.07 17.06 5.55 117.32 23.66 9.57 106.58 26.27 11.67 37.14 95.67 43.24 54.79 12.68 4.28 45.84 138.62
CCL19882 (cobB)
 13.82 8.64 27.32 9.42 29.62 61.27 102.92 16.09 23.59 164.01 148.55 141.71 117.79 10.95 8.83 137.64 32.62 17.88 115.38 27.95 13.33 86.48 89.7 68.56 73.54 18.6 26.7 40.8 119.18
CCL19883 (cobQ)
 30.52 20.88 64.4 20.79 79.88 86.23 123.53 35.08 23.49 161.48 164.82 161.88 111.58 23.0 17.84 136.72 37.79 37.69 112.48 56.81 19.77 95.41 84.77 47.16 50.42 44.35 16.76 34.13 131.76
CCL19892 (BN171_3590013)
 3.6 3.71 4.23 6.65 7.06 6.64 4.87 4.43 3.19 3.87 2.41 4.62 8.42 1.95 3.15 11.61 4.59 4.72 12.01 3.75 6.31 8.54 12.65 4.38 6.45 4.41 3.03 5.89 1.53
CCL19919 (BN171_360013)
 2.87 3.71 3.54 6.04 2.71 0.77 7.04 2.93 0.81 2.81 3.94 3.77 4.36 1.86 4.53 6.23 2.83 3.22 8.28 0.91 1.99 1.79 11.62 2.06 1.64 1.17 1.83 2.87 0.77
CCL19935 (atpC)
 2629.64 347.75 2334.28 655.02 2185.72 1793.83 701.0 1692.41 34.58 970.93 988.72 954.83 1340.73 2532.31 439.74 1659.07 414.53 1937.36 1415.35 4013.53 240.57 2035.09 2177.04 778.17 1251.96 2103.03 544.13 342.78 744.59
CCL19936 (atpD)
 1223.78 216.47 1016.79 303.94 981.74 1207.74 666.88 693.29 748.79 963.87 881.85 972.51 1540.31 815.8 249.02 1931.84 1351.94 1009.09 2037.22 1613.59 167.84 5523.68 2885.09 1177.52 1514.89 940.51 544.75 377.55 821.11
CCL19937 (atpG)
 903.23 118.43 874.07 244.94 762.69 1365.58 763.09 485.41 49.52 1094.48 1060.87 1134.35 1253.55 805.66 152.91 1396.4 847.34 707.51 1459.92 1171.89 83.45 2231.41 2011.06 631.98 1076.13 640.89 365.73 282.84 1167.64
CCL19938 (atpA)
 714.96 102.92 583.99 192.53 552.53 822.41 573.99 397.62 47.24 807.75 854.8 921.98 1283.3 485.29 133.45 1365.74 738.81 575.96 1232.29 848.01 63.4 2504.14 1671.72 673.86 1100.39 456.41 314.85 269.66 965.21
CCL19939 (atpH)
 220.03 25.91 295.31 74.71 220.14 316.58 541.89 89.69 31.67 977.91 929.08 1071.75 747.73 239.79 44.22 757.82 412.13 167.12 823.17 370.4 33.32 888.76 1187.16 305.67 444.87 153.76 114.38 173.64 1185.73
CCL19940 (atpF)
 1347.71 247.65 1365.32 432.49 1212.13 1543.74 706.91 933.73 68.99 1060.14 1097.18 1264.76 1140.1 1232.86 317.62 1098.82 788.98 1061.9 1420.56 1850.2 129.77 1369.28 1662.59 708.55 888.62 943.21 218.45 249.6 1265.37
CCL19942 (atpB)
 549.43 130.77 423.65 136.79 359.65 366.12 505.18 252.86 104.74 655.67 748.58 850.53 1258.78 370.68 150.78 1367.88 527.38 443.36 1363.77 649.6 65.58 979.14 2194.04 1104.25 981.54 253.24 314.06 334.99 780.33
CCL19943 (atpI)
 1775.3 675.58 1383.03 444.87 1091.94 698.95 709.14 1141.63 147.41 916.33 816.09 1103.33 929.81 1562.08 591.74 871.98 818.24 1396.12 1598.32 1920.78 278.14 1672.41 2383.45 1224.4 849.48 809.28 163.97 461.47 868.88
CCL19944 (atpZ)
 58.36 15.49 130.79 36.39 71.49 365.12 640.22 13.65 208.24 876.32 1144.61 1156.82 953.13 120.14 21.96 601.03 695.91 38.43 1851.72 170.02 32.04 157.49 3266.54 757.18 544.2 19.4 24.09 952.34 1416.05
CCL19945 (BN171_3600023)
 1923.11 1727.93 1273.42 736.65 967.71 406.29 963.68 1627.32 195.8 829.43 885.94 1089.76 542.86 611.97 1045.26 456.94 506.39 1515.28 1341.55 1030.07 211.85 145.82 2018.74 1237.46 483.88 559.99 28.9 587.97 960.89
CCL20011 (BN171_3660008)
 20.07 13.65 23.36 13.31 36.28 55.43 30.66 31.02 15.01 39.41 42.62 43.54 44.33 23.29 16.36 62.4 30.15 30.73 56.49 26.5 12.05 38.04 50.02 33.03 29.06 22.73 4.3 31.6 31.79
CCL20016 (BN171_3660013)
 6.88 3.26 7.2 3.83 7.17 15.95 11.26 5.43 8.29 20.5 18.13 15.17 24.41 5.25 4.68 33.63 8.46 8.04 19.93 10.29 3.67 6.62 20.02 10.15 14.04 6.15 1.3 9.06 14.72
CCL20021 (dusB)
 71.2 35.09 58.52 69.41 78.21 100.28 52.89 65.87 43.57 61.56 73.38 78.93 109.79 65.52 41.19 132.47 88.67 82.29 119.33 62.53 33.23 168.76 126.64 75.69 80.54 54.35 12.27 47.2 77.19
CCL20024 (BN171_3670007)
 17.3 9.34 17.5 19.65 24.37 23.53 16.62 14.96 2.67 19.91 17.43 18.86 21.72 12.46 10.13 36.52 10.4 19.92 29.32 13.84 5.24 44.76 23.95 10.33 12.72 14.64 8.32 15.15 16.77
CCL20073 (BN171_3690017)
 29.87 11.91 85.6 127.78 67.62 18.17 59.07 10.62 34.57 77.43 106.37 115.96 97.89 40.23 21.65 42.49 49.53 21.03 138.05 26.72 25.15 4.86 235.75 68.57 28.12 13.87 9.9 91.44 116.99
CCL20091 (BN171_3690035)
 13.02 9.06 9.09 7.06 13.6 4.86 11.53 14.91 5.47 11.05 10.52 10.25 10.9 16.03 7.88 14.55 4.83 13.48 13.0 12.57 6.96 1.82 13.81 5.98 6.12 9.37 1.85 4.24 6.85
CCL20134 (BN171_370008)
 4.52 2.77 5.2 4.57 4.89 2.86 2.45 4.23 1.86 1.22 2.15 2.77 7.87 4.35 3.07 11.64 5.94 3.39 10.34 1.61 2.01 3.52 12.48 2.94 5.42 2.55 1.04 4.67 3.02
CCL20152 (BN171_3710006)
 274.0 201.45 177.09 172.53 212.54 783.05 781.3 189.25 100.43 1228.79 1264.64 1382.2 600.6 290.81 250.07 266.45 334.52 331.69 643.19 321.97 255.89 83.67 673.64 821.27 776.04 163.89 233.04 450.43 1279.31
CCL20153 (BN171_3710007)
 79.16 46.99 160.2 74.55 120.12 500.19 785.52 60.83 175.71 984.49 1273.96 1297.13 789.53 153.03 82.74 699.2 250.89 94.28 737.37 269.08 249.45 83.43 659.86 463.97 462.69 83.11 99.17 388.18 1262.96
CCL20157 (spo0J)
 44.08 74.5 39.03 55.98 34.93 67.11 141.33 35.05 44.9 132.2 100.43 121.1 121.1 34.77 48.1 92.45 48.88 33.26 124.75 51.02 60.15 104.53 87.04 52.19 49.43 26.4 55.41 40.51 87.22
CCL20158 (soj)
 16.71 16.88 15.88 22.87 11.94 31.37 72.46 5.76 6.22 87.1 60.64 74.11 62.37 13.19 15.98 59.3 16.24 12.91 54.14 15.26 24.0 55.46 48.72 23.23 25.92 7.52 18.07 18.33 38.14
CCL20209 (BN171_380004)
 15.2 2.41 19.22 9.97 14.05 19.48 36.59 5.2 10.38 37.55 51.0 44.46 36.33 13.37 7.28 32.43 20.87 12.39 55.73 20.2 9.09 12.71 69.42 32.28 85.82 10.88 3.46 0.0 48.71
CCL20210 (BN171_380005)
 18.5 4.97 25.47 17.62 15.86 25.24 27.77 8.13 6.22 42.31 45.07 37.97 39.79 33.85 9.66 44.45 32.06 16.05 57.36 23.61 14.41 39.93 70.9 32.35 75.14 11.45 5.78 0.41 42.51
CCL20214 (spaF)
 5.48 6.37 6.27 11.91 13.4 6.58 10.81 9.68 1.2 14.69 8.87 8.06 11.8 2.99 7.78 12.33 5.17 10.51 10.19 3.59 3.36 8.3 12.04 10.1 7.22 4.08 2.0 6.32 13.72
CCL20215 (spaE)
 3.23 2.98 3.74 9.74 6.12 7.85 6.27 3.26 1.69 7.66 8.07 10.26 12.87 1.91 4.57 12.62 8.97 5.91 16.78 2.4 2.89 10.68 25.28 13.83 11.74 3.56 3.65 8.46 8.6
CCL20217 (spaG)
 2.63 3.42 3.24 8.7 5.76 12.3 3.35 4.81 1.42 11.46 6.28 9.25 18.01 1.46 4.61 20.69 12.15 5.83 20.25 2.71 3.46 19.72 30.18 14.9 11.92 2.75 4.59 8.88 7.23
CCL20220 (spaK)
 8.78 6.08 10.37 11.57 22.22 32.92 28.7 18.78 4.81 39.09 42.73 41.76 46.22 10.54 11.5 72.39 28.96 28.93 60.95 13.2 7.11 44.39 73.86 52.3 51.1 16.84 16.53 41.54 35.69
CCL20275 (serS)
 88.5 50.6 114.98 87.28 217.3 260.82 197.8 155.09 71.0 305.09 282.24 284.47 317.08 79.01 69.66 502.2 163.06 179.78 329.85 152.9 91.28 525.27 200.67 174.6 219.82 146.73 139.79 128.68 245.07
CCL20278 (BN171_40006)
 181.69 115.03 279.47 430.57 367.64 585.74 365.4 164.55 40.79 462.49 302.78 422.65 371.23 218.0 171.91 410.38 251.87 235.39 508.02 170.36 137.74 413.33 410.03 140.78 177.56 188.41 145.83 298.4 300.69
CCL20334 (BN171_420004)
 16.54 11.14 18.76 17.06 21.47 23.17 20.71 14.42 17.46 139.81 140.01 31.7 41.09 16.36 10.62 48.97 15.74 19.61 48.84 19.54 16.29 6.75 67.25 24.34 28.95 14.8 3.67 23.15 26.79
CCL20335 (BN171_420005)
 22.29 14.11 29.99 30.14 30.88 48.77 34.21 19.29 20.08 181.34 192.2 45.57 60.63 18.76 14.96 70.82 32.6 32.25 89.22 20.97 23.03 19.57 119.87 56.94 52.96 18.76 10.67 44.12 40.41
CCL20479 (gapN)
 179.87 58.6 277.0 72.49 279.29 30.03 125.89 202.35 51.79 108.46 121.07 198.66 239.1 16.25 58.41 69.08 270.52 207.72 895.84 34.15 9.53 55.91 2214.04 263.07 35.91 31.32 34.38 463.63 149.17
CCL20537 (BN171_600002)
 37.76 22.35 31.57 17.38 23.37 36.32 31.93 26.94 61.21 59.47 58.59 69.61 51.89 28.29 25.78 63.31 45.0 30.77 76.71 28.72 27.35 26.65 77.12 46.77 50.05 18.14 15.67 38.15 55.77
CCL20538 (BN171_600003)
 26.75 12.55 21.32 17.8 23.52 15.33 21.54 13.01 42.81 45.0 35.84 37.62 38.26 20.95 21.5 41.26 22.57 26.47 59.79 26.84 17.95 33.33 64.42 38.62 39.72 14.79 8.21 17.99 26.68

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)