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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19380 (phnV) | 1.95 | 0.86 | 0.9 | -1.04 | -0.48 | -2.4 | -0.1 | 0.58 | -0.08 | -1.73 | 0.33 | -0.5 | -0.36 | 0.78 | -0.87 | -0.76 | -1.06 | -0.15 | -0.07 | -0.06 | -1.56 | -0.98 | -1.99 | 1.47 | -1.31 | -0.55 | -0.66 | -0.02 | -0.41 | -3.09 | -1.05 | -0.4 | -0.28 | -1.83 | 0.76 | -1.2 | 1.94 | -0.73 | 0.2 |
AAL21181 (STM2280) | 1.24 | 1.17 | -2.01 | -1.21 | -1.4 | -2.33 | -0.98 | -0.19 | -0.5 | -1.77 | 0.22 | -1.94 | -1.28 | 0.35 | -0.39 | -0.96 | -0.5 | -1.51 | -1.11 | -0.91 | -3.44 | -0.37 | -0.22 | 2.13 | -2.11 | -1.06 | -1.11 | -0.06 | -0.85 | -2.02 | -1.0 | -0.95 | -0.84 | -1.27 | 2.78 | -1.95 | 2.46 | -1.93 | -1.48 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.