Heatmap: Cluster_35 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
BHI
Basal Medium
CD196,BHI
CD196,Basal Medium
CD196,Log,BHI
ClnR mutant
LB-CD16
Log,BHI
LuxS KO
ND-CD12
ND-CD13
ND-CD17
R20291
R20291,BHI
R20291,Basal Medium
R20291,Heme+
R20291,Log
R20291,Log,BHI
Strain 630
Strain 630,BHI
Strain 630,Basal Medium
Strain 630,Faecal water+
Strain 630,HPUra+
Strain 630,Lag
Strain 630,Log
Strain 630,Log,BHI
Strain 630,Sporulating
TW11
UK1
CCL17422 (BN171_150009)
-2.44 -0.41 -1.59 0.62 -1.55 -1.11 0.98 -2.96 -0.82 0.4 0.31 0.56 0.82 -2.07 -1.06 -0.32 -0.39 -1.63 1.0 -2.04 0.1 1.41 0.97 0.6 0.05 -2.76 0.22 0.1 0.54
CCL17987 (BN171_200008)
-1.46 -1.86 -1.09 -0.7 -0.86 0.19 0.58 -1.43 -1.55 0.46 0.55 0.38 1.12 -2.16 -1.89 1.38 -0.31 -1.49 1.25 -1.1 -0.67 -0.16 0.81 0.2 1.4 -1.12 -0.36 -0.79 0.11
CCL18082 (BN171_210018)
0.07 -0.65 -1.08 -1.79 -1.2 -2.25 -0.24 -0.69 1.58 0.76 0.13 -0.12 0.49 -0.21 -0.76 1.08 -0.95 -0.2 1.35 -0.95 -0.88 -0.79 0.34 0.29 -0.11 -2.4 -1.7 1.24 -0.13
CCL18740 (BN171_260009)
-0.41 -0.43 0.04 -0.24 0.03 -0.32 0.59 -0.7 0.45 0.67 0.71 0.6 0.37 -0.69 -0.16 0.42 -0.93 -0.16 1.06 0.04 -0.03 -1.5 1.08 -0.93 -1.32 -0.75 -1.84 -1.35 0.37
CCL18741 (BN171_260010)
-0.91 -1.12 -0.42 -0.76 -0.25 0.06 0.77 -1.19 0.3 0.99 0.84 0.72 0.61 -0.87 -0.46 0.55 -1.02 -0.6 1.04 -0.27 -0.16 -1.15 1.16 -0.55 -0.67 -0.82 -1.69 -0.77 0.41
CCL18872 (cbiQ)
-5.3 -10.49 -2.62 -7.37 -1.89 -0.9 0.8 -7.49 0.2 1.65 1.24 1.15 0.47 -4.96 -7.37 0.15 -0.97 -4.66 1.76 -4.14 -6.93 -1.47 2.0 0.19 -0.63 -5.41 -2.59 1.61 0.53
CCL18873 (cbiO)
-4.92 -6.71 -2.77 -6.45 -1.97 -1.39 0.74 -4.01 0.12 1.34 1.08 1.15 0.04 -4.55 -6.28 0.14 -0.88 -3.84 1.56 -2.13 -5.08 0.35 1.7 1.37 0.57 -1.74 -1.89 1.08 0.26
CCL19002 (BN171_280017)
-1.11 -2.09 -1.0 -0.78 -0.96 0.14 1.6 -0.86 -0.52 0.79 0.41 0.61 1.15 -0.69 -1.67 1.04 -0.78 -1.08 0.99 -0.92 -1.73 -1.0 1.03 -0.8 -0.17 -1.38 0.28 0.01 0.07
CCL19396 (BN171_3100002)
-0.07 -0.87 -0.43 -0.72 -1.01 -1.73 -0.37 -1.61 -0.26 -0.02 -0.01 -0.02 -0.26 -0.51 -0.6 0.03 -1.05 -0.62 1.22 0.42 -0.43 -0.72 1.75 1.36 -0.23 -0.62 0.11 0.75 -0.19
CCL19398 (BN171_3100004)
-2.04 -1.0 -2.1 -1.23 -2.69 -0.52 1.01 -2.3 -0.53 1.08 0.69 1.02 -0.57 -2.83 -1.66 -0.38 -1.06 -2.22 1.44 -0.88 -0.02 -1.03 1.97 0.65 0.2 -1.64 -0.21 0.76 0.3
CCL19485 (BN171_3180009)
-6.28 - -6.28 -5.94 -6.1 -2.26 1.76 - -2.88 1.44 1.45 1.35 1.13 -4.9 -5.08 0.84 -1.01 -5.15 1.36 -6.08 - - 1.95 -1.92 -2.15 -6.38 -3.07 0.92 1.88
CCL19500 (xylR)
-0.24 -2.21 -0.72 -1.41 -0.65 -1.38 0.29 -1.77 -0.92 0.76 0.7 0.81 0.34 -0.88 -1.83 0.83 -0.45 -0.23 1.25 -0.26 -1.29 -0.71 1.82 -0.26 0.25 -1.15 -2.54 0.89 0.14
CCL19501 (xynA)
-1.64 -0.91 -1.35 -1.09 -1.56 -2.17 -0.44 -1.42 -2.36 -0.59 -0.19 0.1 -1.17 -1.96 -0.73 -2.21 -0.08 -1.23 2.31 -1.75 -2.1 -2.88 3.18 -0.02 -2.28 -2.55 0.38 0.55 0.15
CCL19502 (xynB)
-1.25 -0.52 -0.96 -0.66 -1.36 -2.99 -0.41 -1.04 -2.45 -0.53 -0.28 0.1 -1.27 -2.11 -0.37 -2.37 -0.41 -1.03 2.2 -1.57 -1.88 -2.76 3.0 0.24 -2.13 -2.18 0.37 1.01 0.11
CCL19503 (xynD)
-2.8 -2.59 -2.99 -2.61 -3.43 -2.56 0.51 -3.48 -2.43 -0.17 0.34 0.69 -1.07 -4.02 -2.42 -2.0 -0.12 -2.61 2.28 -3.92 -3.67 -1.66 3.09 0.37 -1.9 -4.47 0.33 1.09 0.83
CCL19507 (BN171_3180031)
-1.93 -2.52 -2.54 -2.85 -1.77 1.15 -1.26 -2.27 -3.03 -0.5 -0.25 0.11 -0.85 -2.25 -2.47 -0.45 -1.08 -1.6 2.09 -1.0 -0.76 -1.16 2.61 0.44 1.72 -1.01 -0.64 0.73 -0.88
CCL19564 (BN171_3270002)
-2.64 -1.5 -2.73 -1.34 -1.74 -1.09 0.87 -1.32 -0.35 0.7 0.89 1.19 0.64 -2.09 -0.71 1.0 -0.2 -0.95 1.0 -0.79 -0.77 -1.01 1.11 0.24 0.03 -1.22 0.15 0.83 0.33
CCL19567 (BN171_3270005)
0.08 -1.06 -0.37 -0.88 -0.09 -0.2 -0.01 -0.51 0.26 0.16 -0.33 -0.77 0.45 0.09 -0.67 0.45 -0.54 0.09 1.25 0.33 -0.17 -2.29 0.97 0.25 0.61 -0.68 -0.21 0.45 -0.91
CCL19612 (BN171_3290025)
-0.66 -1.43 -0.56 -0.87 -0.16 -0.24 -0.16 -1.8 0.15 0.81 0.22 0.17 0.4 -0.87 -1.01 0.5 -0.14 -0.53 1.02 0.69 -0.05 -0.53 0.82 0.96 0.72 -0.08 -0.03 - -0.43
CCL19613 (BN171_3290026)
-0.94 -1.41 -1.06 -1.25 -0.14 -0.02 0.85 -0.88 0.17 0.97 0.91 0.9 0.79 -1.48 -0.78 0.89 0.25 -0.33 0.68 -1.36 -1.47 -2.26 0.63 0.48 0.45 -1.88 -0.34 - 0.73
CCL19614 (BN171_3290027)
-1.92 -2.19 -1.3 -0.77 -2.36 0.43 -5.66 -2.37 1.17 - -5.61 -6.0 -0.55 -1.36 -2.27 -1.25 -0.77 -2.78 2.03 0.19 0.59 0.28 2.13 1.01 0.7 -0.81 1.24 1.1 -
CCL19639 (cwp)
-0.46 0.21 -0.27 -0.28 -0.68 -0.51 0.5 -1.08 -0.0 0.53 0.28 0.25 0.37 -0.46 0.27 0.49 -0.61 -0.5 0.81 0.35 0.89 -1.63 0.62 -0.08 -0.79 -0.99 -0.57 0.07 -0.11
CCL19647 (BN171_3340014)
-0.05 -1.49 -0.38 -1.07 -0.62 -1.16 0.75 -1.53 0.6 0.9 0.46 0.5 0.28 -0.46 -1.16 -0.1 -0.58 -0.17 1.26 0.18 -0.63 -0.05 0.95 0.25 0.02 -0.84 -1.25 -0.56 0.38
CCL19648 (BN171_3340015)
-0.35 -1.79 -1.09 -1.69 -0.82 -1.51 1.33 -1.35 -0.16 1.16 0.78 0.72 0.27 -1.12 -1.06 -0.11 -0.6 -0.19 1.31 -0.24 -0.94 1.09 0.42 0.4 -0.33 -1.21 -1.05 -0.87 0.41
CCL19649 (BN171_3340016)
-1.43 -3.21 -2.07 -2.46 -1.86 -0.08 0.25 -3.02 -1.26 0.09 -0.13 -0.37 -0.53 -2.08 -2.35 -0.96 -0.79 -1.64 2.28 -0.05 -0.29 1.08 2.26 1.04 0.59 -0.77 -0.17 -1.14 -0.29
CCL19650 (BN171_3340017)
-0.9 -2.83 -1.57 -2.65 -1.31 0.04 0.53 -1.85 -1.84 -0.47 -0.04 -0.06 -0.58 -1.37 -1.86 -1.26 -0.73 -0.89 2.18 0.27 -0.34 0.65 2.19 0.84 0.46 -0.14 -0.48 -1.04 -0.12
CCL19669 (BN171_3370003)
-0.67 0.14 -0.56 -0.27 -0.1 -3.17 0.07 -0.21 -3.4 0.26 0.66 1.08 0.0 -4.01 -0.57 -1.75 -1.08 -0.55 1.71 -2.3 -2.96 -2.18 2.67 1.18 -1.96 -2.55 -2.48 -3.72 0.58
CCL19673 (BN171_3380004)
-0.62 -1.84 0.02 0.83 0.78 0.31 0.24 -0.99 -1.14 0.32 0.25 0.7 0.97 -0.09 -1.12 0.16 -0.52 -0.17 0.99 -0.4 -1.22 -0.02 0.9 -2.04 -0.94 -0.53 -0.87 -0.51 0.4
CCL19686 (BN171_340003)
-1.16 -1.37 -0.66 -1.03 -1.09 -0.79 0.01 -1.22 1.35 0.27 0.31 -0.43 0.67 -0.66 -0.96 0.27 -0.1 -0.81 1.47 -0.38 -0.18 0.36 0.95 0.07 -0.34 -1.38 0.19 0.22 0.26
CCL19766 (BN171_3470004)
-0.87 -0.5 -0.9 -1.03 -1.26 -2.05 0.14 -0.44 2.05 -0.5 -0.59 -0.58 0.81 -0.21 -0.82 0.28 -1.01 -1.51 1.7 0.63 -1.24 0.7 -0.9 0.74 0.04 -1.44 0.24 -0.61 -0.97
CCL19773 (BN171_3470011)
-5.87 -5.56 -4.61 -6.01 -4.97 -3.69 2.15 -5.63 -2.28 1.86 1.85 2.23 0.22 -6.07 -4.68 -1.72 -1.56 -5.7 0.87 -7.09 -5.17 - 1.44 -0.84 -3.61 -8.24 -4.34 -0.01 2.02
CCL19781 (BN171_3470019)
-1.83 -1.36 -1.86 -0.22 -1.02 -1.27 -0.46 -2.18 2.2 -0.55 -1.43 -1.23 0.52 -1.97 -0.59 -0.97 -0.71 -0.88 2.41 -1.37 -0.17 0.1 1.34 0.75 0.19 -1.63 0.04 -0.74 -1.7
CCL19828 (BN171_3520014)
-1.15 -2.76 -1.78 -0.8 -1.58 -0.92 1.85 -1.62 -2.0 1.73 1.04 1.19 1.19 -1.46 -2.22 0.97 -0.74 -1.12 1.14 -2.72 -2.71 -2.92 0.82 -1.82 -0.96 -3.47 -0.64 0.99 0.05
CCL19857 (hprK)
-0.9 -0.81 -0.54 -0.73 -0.57 -1.05 -0.6 -0.91 -0.35 -0.39 0.04 0.3 -0.06 -1.6 -0.71 -0.49 -0.05 -0.82 2.21 -0.82 -1.74 -0.64 2.58 -0.08 -1.41 -1.38 -1.77 -0.58 0.58
CCL19858 (uvrC)
-0.87 -0.94 -0.54 -0.84 -1.07 -1.09 -0.15 -1.68 -0.23 -0.07 0.41 0.59 -0.12 -1.96 -1.12 -0.99 -0.23 -1.19 2.32 -1.44 -2.16 -1.56 2.64 0.23 -2.11 -2.53 -1.35 -0.36 0.62
CCL19903 (BN171_3590024)
-0.15 -0.56 -0.3 -0.07 -0.03 -0.56 -0.6 -0.34 0.69 -0.18 -0.21 -0.28 0.32 -0.32 0.07 0.81 -0.43 0.33 0.7 -0.1 -0.58 0.0 0.8 0.59 0.42 -0.35 -1.39 -0.36 -0.42
CCL19921 (BN171_360015)
-0.39 -2.19 -0.44 -1.46 -0.5 0.02 -0.72 -1.12 -3.06 -0.75 -0.51 -1.0 -0.15 -0.44 -1.6 0.19 -1.67 -0.44 1.33 0.37 -1.42 1.69 1.72 1.19 1.26 0.03 -1.83 -0.3 -0.8
CCL19922 (BN171_360016)
-1.01 -2.71 -0.99 -1.2 -0.49 0.19 -0.61 -1.23 -3.76 -0.65 -0.5 -0.45 -0.46 -1.08 -1.73 -0.38 -1.41 -0.57 1.4 0.88 -1.41 1.42 1.78 1.41 1.04 0.5 -1.69 -0.02 -0.64
CCL19973 (BN171_3610016)
-2.18 -1.71 -1.85 -0.98 -1.96 -0.13 0.04 -2.57 0.24 0.55 0.3 0.45 0.88 -2.32 -1.31 0.87 -0.46 -1.77 1.6 -1.7 -0.59 -0.39 1.73 1.03 0.54 -1.92 -0.77 0.65 -0.33
CCL19997 (phnM)
-1.68 -2.51 -1.15 -0.39 -0.92 -0.64 0.8 -2.95 -0.41 0.01 0.53 0.84 0.84 -2.19 -1.92 1.03 -0.91 -1.68 1.85 -0.9 -0.87 -0.91 2.25 -0.04 -0.21 -1.81 -1.31 - 0.66
CCL19998 (phnL)
-1.78 -2.09 -1.64 -0.77 -1.46 -0.86 0.16 -2.68 -0.08 0.63 0.45 1.01 0.81 -2.51 -1.66 1.1 -0.71 -1.03 2.03 -1.39 -1.27 -0.74 2.35 0.09 -0.46 -2.41 -1.34 - 0.1
CCL19999 (phnK)
-0.85 -1.26 -0.5 -0.2 -0.67 -1.15 1.12 -1.23 -0.99 0.47 0.71 0.56 0.3 -1.88 -0.93 0.99 -0.75 -0.52 1.78 -1.18 -1.38 -0.91 2.19 -0.19 -0.64 -1.21 -1.84 - -0.18
CCL20000 (phnJ)
-1.24 -1.37 -1.3 -0.41 -0.63 -1.07 0.88 -1.73 -0.11 1.38 0.38 0.89 0.53 -1.92 -1.26 0.94 -1.01 -0.62 1.62 -0.95 -1.47 -0.71 2.01 -0.4 -0.77 -1.37 -1.59 - 0.31
CCL20047 (BN171_3670030)
-0.83 -2.04 -0.32 -0.34 -0.45 -0.65 1.24 -2.01 -0.68 0.21 1.35 0.51 -0.31 -0.28 -1.26 0.2 -1.2 -0.6 0.85 0.62 0.46 -3.82 0.68 0.21 -0.39 -0.19 -3.77 -0.09 1.25
CCL20081 (BN171_3690025)
-3.61 -4.13 -3.04 -3.61 -4.09 -3.22 0.33 -5.22 -1.61 1.08 0.96 1.31 0.34 -5.88 -3.9 -2.19 -1.0 -3.98 2.38 -3.76 -3.08 -4.22 2.73 0.92 -1.75 -5.53 0.28 0.45 0.44
CCL20092 (BN171_3690036)
-1.91 -4.37 -1.82 -2.99 -1.91 -0.44 1.76 -4.91 -0.39 1.27 1.19 1.12 1.16 -0.57 -2.69 1.2 -1.23 -2.79 1.26 -1.85 -1.58 -3.38 1.33 -0.52 -0.6 -3.05 -1.99 0.02 0.95
CCL20135 (BN171_370009)
-4.71 -5.15 -2.25 -3.65 -2.7 -0.39 0.87 -4.52 0.03 1.68 1.25 1.46 1.03 -2.24 -3.97 0.97 -0.18 -3.54 1.41 -1.74 -2.25 -3.03 1.72 0.04 -0.02 -2.98 -3.17 - 1.27
CCL20136 (BN171_370010)
-0.4 -0.7 -0.28 -0.45 -0.57 -1.78 0.55 -0.16 0.66 0.65 0.61 0.65 0.46 -0.22 -0.44 0.33 -0.03 -0.12 0.96 -0.62 -0.41 -1.22 1.1 0.51 0.12 -1.46 -1.82 - 0.36
CCL20139 (BN171_370013)
-2.11 -1.49 -0.52 1.62 -0.33 -2.28 -0.27 -2.42 0.02 0.33 0.19 0.66 0.25 -1.86 -0.53 0.12 -0.36 -1.5 1.64 -0.4 0.79 -0.52 1.21 0.25 -0.31 -1.33 -0.38 - 0.6
CCL20211 (BN171_380006)
-3.83 -5.55 -1.79 -2.22 -3.53 -1.43 0.75 -6.13 0.88 1.07 0.55 -0.12 0.99 -2.74 -3.0 0.26 -0.01 -3.36 1.94 -2.6 -1.12 -3.44 1.57 0.8 -0.16 -4.97 -0.59 1.69 0.37
CCL20213 (BN171_380008)
-1.76 -3.7 -1.28 -1.91 -2.01 -0.98 1.0 -1.82 0.84 0.59 0.57 0.67 1.42 -1.23 -3.08 1.26 0.24 -1.75 0.95 -1.07 -1.6 -2.48 1.34 1.22 0.81 -2.26 -2.05 -3.06 0.41
CCL20282 (BN171_400001)
-3.62 -5.86 -2.27 -3.18 -2.91 0.87 -0.36 -5.24 -1.63 -0.89 -1.4 -1.08 -0.29 -2.31 -4.07 0.3 -1.52 -3.82 1.97 1.29 -0.29 -1.73 2.39 1.39 1.73 0.46 -0.04 -4.53 -1.56
CCL20447 (nfo)
-1.04 0.08 -0.57 -0.2 -0.77 -3.4 0.68 -0.62 -0.97 0.36 0.31 1.02 -0.62 -3.59 -0.31 -2.48 -0.32 -0.83 1.93 -2.37 -2.58 -1.85 2.09 1.17 -1.9 -2.82 -1.59 0.71 0.58
CCL20460 (radA)
-1.23 -1.64 -1.29 -1.02 -1.19 -0.6 0.08 -1.46 1.63 0.19 0.2 0.22 0.52 -1.34 -1.42 0.24 -0.58 -1.18 1.77 -1.11 -0.83 1.2 1.37 0.05 -0.15 -1.57 -1.49 -0.77 0.33
CCL20461 (disA)
-0.8 -1.22 -0.87 -0.68 -0.33 -0.53 0.45 -0.83 1.32 0.34 0.2 0.33 0.45 -1.09 -0.91 0.14 -0.98 -0.57 1.89 -0.55 -0.07 0.64 1.29 -0.93 -0.66 -0.81 -2.64 -1.86 0.11
CCL20524 (BN171_60015)
-0.05 -0.9 -0.28 -0.64 -0.23 -0.19 0.28 -1.14 -0.29 0.48 0.23 0.45 0.54 0.37 -0.85 0.87 -0.95 -0.36 1.1 -0.13 -0.1 -2.9 1.1 0.37 0.21 -1.7 -0.92 0.08 -0.28
CCL20543 (BN171_630001)
-3.22 -4.54 -2.55 -3.37 -2.43 -3.82 -0.16 -3.81 -1.25 0.41 0.51 1.01 -0.5 -4.2 -3.63 -1.52 -1.1 -2.48 2.39 -2.93 -2.44 -3.1 2.6 0.54 -1.8 -3.75 -2.48 2.38 0.48
CCL20545 (BN171_640001)
-1.23 -2.38 -0.52 -0.96 -1.13 -3.24 0.37 -2.98 -0.52 0.4 0.25 0.71 -0.63 -2.71 -1.71 -1.79 -0.72 -1.62 2.45 -1.7 -1.45 -4.38 2.66 1.33 -1.67 -2.5 0.0 - 0.62
CCL20614 (BN171_740002)
-1.04 -2.94 -0.63 -0.93 -0.99 0.65 0.37 -2.52 0.82 -0.1 0.18 0.08 0.64 -1.29 -1.36 0.68 -0.53 -1.19 1.81 -0.4 -0.2 -1.59 1.44 0.41 0.02 -0.85 -0.11 0.16 -0.85
CCL20621 (BN171_750005)
-4.36 -6.36 -2.48 -3.52 -3.39 0.39 0.73 -5.39 -1.96 2.04 1.09 1.16 1.02 -3.19 -3.99 1.13 -0.06 -3.48 1.35 -2.73 -2.36 -3.18 1.63 0.81 0.58 -4.72 -1.61 - 0.75
CCL20655 (BN171_830005)
-0.34 -1.05 -0.47 -1.07 -0.77 1.02 0.65 -1.19 -0.15 0.01 0.15 0.82 -0.67 -1.13 -1.27 -1.02 -0.08 -0.84 1.89 -1.18 -2.12 -0.57 2.17 -0.17 -1.05 -2.02 -1.21 -1.34 0.71
CCL20675 (BN171_90001)
-0.19 -0.01 -0.17 0.36 -0.7 -2.53 0.3 -1.06 -0.6 -0.91 -0.58 -0.26 -0.88 -1.65 -0.26 -1.94 0.02 -0.67 1.78 -0.79 -0.99 -0.25 1.78 1.62 -0.97 -2.03 0.85 -0.13 -0.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.