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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19023 (citD2) | -1.09 | 1.98 | -1.86 | -1.3 | -0.95 | -2.45 | -2.45 | 0.14 | 0.64 | -0.82 | 0.74 | -3.03 | -2.11 | -1.56 | -4.14 | -1.22 | -1.09 | -2.61 | -1.98 | -1.34 | -2.99 | -1.95 | 2.07 | 2.2 | -1.34 | -1.73 | -0.45 | -1.28 | -2.43 | -5.41 | -2.99 | -1.54 | -1.84 | 1.66 | -0.7 | -0.79 | 3.03 | -0.43 | -1.3 |
AAL19024 (citE2) | -2.45 | 0.82 | -1.9 | -1.55 | -1.29 | -2.0 | -2.51 | 0.68 | 0.68 | -0.54 | 0.63 | -2.71 | -1.88 | -0.7 | -1.91 | -2.07 | -1.05 | -0.92 | -1.19 | -1.09 | -2.16 | -1.83 | 2.1 | 2.07 | -1.89 | -1.17 | -0.88 | -1.86 | -2.34 | -4.75 | -2.33 | -1.45 | -2.3 | 1.46 | -0.89 | -1.12 | 3.42 | -1.1 | -2.01 |
AAL19025 (citF2) | -1.61 | 0.93 | -1.08 | -1.57 | -1.15 | -2.4 | -1.59 | 0.21 | 0.29 | -0.61 | 0.26 | -2.29 | -0.91 | -0.8 | -1.81 | -1.19 | -1.56 | -1.62 | -1.35 | -1.05 | -2.5 | -1.29 | 2.19 | 2.21 | -1.4 | -1.36 | -0.91 | -1.68 | -1.74 | -4.32 | -1.85 | -1.15 | -1.96 | 1.64 | -1.37 | -1.32 | 3.25 | -0.86 | -1.05 |
AAL19026 (citX2) | -1.26 | 1.86 | -0.35 | -1.07 | -0.34 | -1.77 | -2.32 | 0.4 | 0.52 | -0.37 | 0.02 | -2.67 | -0.5 | -0.51 | -1.99 | -1.79 | -0.85 | -1.39 | -1.26 | -0.95 | -0.58 | -0.3 | 1.51 | 1.63 | -1.0 | -1.27 | -0.34 | -0.88 | -1.3 | -4.24 | -1.39 | -0.36 | -1.15 | 1.1 | -0.71 | -0.75 | 2.85 | 0.08 | -0.93 |
AAL22130 (STM3258) | -1.66 | 2.19 | - | - | - | - | -0.3 | 0.53 | 0.61 | - | 1.0 | -0.25 | - | 0.07 | -0.17 | 1.25 | -0.15 | - | - | - | - | 1.77 | 1.46 | 1.43 | -3.03 | - | 0.5 | - | - | - | -0.48 | - | - | 1.12 | 0.91 | 1.04 | 2.34 | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.