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Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19014 (STM0050) | 30.09 | 33.05 | 18.94 | 25.37 | 17.09 | 11.42 | 53.38 | 43.05 | 32.17 | 23.86 | 43.47 | 16.04 | 30.73 | 24.05 | 105.49 | 23.96 | 43.46 | 71.44 | 50.85 | 74.99 | 4.97 | 16.16 | 28.9 | 59.81 | 7.87 | 17.02 | 17.44 | 27.61 | 15.38 | 5.95 | 16.55 | 25.85 | 15.69 | 33.49 | 66.96 | 18.31 | 125.47 | 20.97 | 29.2 |
AAL19198 (ldcC) | 28.94 | 50.39 | 47.51 | 46.53 | 33.61 | 13.39 | 71.08 | 50.22 | 29.68 | 32.85 | 31.41 | 26.81 | 66.8 | 42.88 | 115.98 | 33.07 | 34.14 | 72.67 | 69.05 | 75.34 | 18.34 | 18.58 | 30.94 | 70.56 | 20.82 | 39.12 | 49.88 | 47.48 | 40.6 | 4.32 | 22.15 | 43.05 | 36.23 | 34.37 | 48.0 | 43.0 | 101.24 | 38.02 | 65.3 |
AAL19199 (yaeR) | 34.69 | 91.34 | 69.56 | 67.99 | 50.06 | 12.5 | 180.89 | 78.48 | 42.34 | 64.76 | 49.21 | 45.35 | 78.91 | 44.97 | 166.69 | 56.64 | 64.88 | 115.43 | 138.79 | 126.15 | 30.47 | 35.56 | 52.04 | 131.1 | 43.31 | 60.05 | 71.83 | 83.98 | 57.73 | 4.41 | 32.66 | 54.98 | 48.7 | 52.56 | 80.56 | 72.99 | 170.03 | 55.25 | 77.61 |
AAL19221 (dnaQ) | 48.97 | 82.52 | 76.01 | 63.87 | 33.08 | 16.65 | 102.35 | 94.4 | 52.62 | 75.58 | 67.94 | 55.08 | 98.57 | 91.01 | 141.15 | 71.21 | 65.31 | 83.73 | 73.82 | 105.22 | 30.92 | 81.06 | 68.91 | 75.53 | 32.62 | 72.09 | 34.99 | 68.8 | 73.62 | 14.55 | 37.71 | 50.73 | 71.78 | 74.23 | 96.42 | 38.77 | 159.4 | 44.52 | 70.11 |
AAL19314 (STM0360) | 9.97 | 37.34 | 73.63 | 15.2 | 8.81 | 28.42 | 81.72 | 17.41 | 9.6 | 5.09 | 13.69 | 2.78 | 108.14 | 5.4 | 3.93 | 40.48 | 2.85 | 63.21 | 56.75 | 53.34 | 48.21 | 8.28 | 0.72 | 48.14 | 67.63 | 106.25 | 7.8 | 58.35 | 23.01 | 1.26 | 37.11 | 4.86 | 15.6 | 25.96 | 4.04 | 3.1 | 70.4 | 41.57 | 6.22 |
AAL19315 (STM0361) | 14.17 | 46.19 | 79.33 | 13.11 | 12.58 | 30.61 | 34.12 | 17.52 | 13.59 | 12.8 | 17.54 | 4.87 | 82.79 | 17.65 | 4.91 | 28.28 | 4.8 | 25.51 | 23.57 | 25.85 | 56.27 | 25.26 | 4.45 | 42.45 | 52.59 | 87.22 | 10.7 | 42.96 | 24.59 | 2.5 | 27.0 | 9.59 | 16.13 | 18.04 | 5.76 | 8.54 | 48.4 | 42.2 | 11.61 |
AAL19316 (STM0362) | 27.39 | 202.18 | 102.0 | 19.97 | 13.45 | 9.28 | 107.1 | 55.99 | 12.62 | 21.47 | 17.23 | 5.64 | 114.53 | 19.93 | 64.54 | 30.97 | 47.28 | 75.14 | 46.2 | 64.85 | 40.4 | 111.8 | 11.75 | 159.26 | 58.21 | 22.96 | 19.24 | 31.28 | 25.94 | 0.76 | 3.95 | 18.29 | 16.1 | 17.9 | 55.1 | 33.55 | 187.4 | 31.46 | 27.37 |
AAL19335 (STM0381) | 10.97 | 24.1 | 85.39 | 7.87 | 8.99 | 4.05 | 17.3 | 14.33 | 6.73 | 8.13 | 11.54 | 2.52 | 89.9 | 5.93 | 7.38 | 23.79 | 4.77 | 26.24 | 20.26 | 29.52 | 57.09 | 8.05 | 2.83 | 26.12 | 57.42 | 9.56 | 5.33 | 18.97 | 6.87 | 1.13 | 19.13 | 14.7 | 4.68 | 24.63 | 6.61 | 5.87 | 39.27 | 28.31 | 22.43 |
AAL19339 (yaiC) | 13.68 | 36.96 | 29.96 | 8.63 | 9.53 | 5.63 | 26.69 | 19.51 | 12.06 | 7.85 | 32.88 | 3.63 | 78.62 | 23.13 | 14.41 | 22.21 | 13.07 | 42.41 | 41.14 | 44.81 | 45.15 | 30.75 | 3.25 | 36.09 | 52.62 | 17.83 | 10.22 | 24.63 | 12.2 | 2.35 | 17.02 | 12.74 | 11.13 | 15.77 | 20.72 | 7.23 | 50.73 | 13.04 | 30.19 |
AAL19368 (yajI) | 11.84 | 30.72 | 21.73 | 11.88 | 14.08 | 4.53 | 39.39 | 22.21 | 11.99 | 20.98 | 9.84 | 10.33 | 25.37 | 14.29 | 28.47 | 7.98 | 20.96 | 19.8 | 28.6 | 22.49 | 9.64 | 10.76 | 8.25 | 58.74 | 11.87 | 15.04 | 20.53 | 30.02 | 14.16 | 2.11 | 11.42 | 21.95 | 16.16 | 9.19 | 30.44 | 14.43 | 87.84 | 15.48 | 23.36 |
AAL19433 (STM0479) | 40.35 | 56.67 | 65.67 | 29.82 | 30.65 | 17.39 | 78.44 | 80.9 | 48.11 | 38.9 | 52.87 | 20.44 | 79.8 | 64.28 | 70.78 | 27.08 | 74.72 | 66.83 | 71.21 | 84.08 | 33.13 | 39.29 | 24.77 | 59.74 | 26.7 | 29.49 | 24.19 | 49.68 | 27.36 | 7.07 | 33.73 | 48.65 | 25.27 | 30.44 | 110.16 | 24.77 | 81.78 | 40.06 | 69.35 |
AAL19555 (ybdM) | 23.47 | 41.19 | 92.82 | 27.74 | 25.4 | 16.98 | 67.99 | 58.77 | 17.76 | 42.42 | 22.05 | 12.72 | 45.74 | 63.92 | 57.81 | 46.59 | 53.08 | 59.13 | 48.61 | 64.64 | 41.67 | 49.04 | 17.43 | 27.96 | 31.25 | 22.48 | 18.08 | 23.89 | 25.6 | 3.57 | 34.66 | 35.24 | 28.65 | 27.38 | 47.13 | 13.65 | 44.95 | 26.89 | 32.94 |
AAL19566 (ybdR) | 6.63 | 24.51 | 21.18 | 6.22 | 6.75 | 10.61 | 37.74 | 14.63 | 4.34 | 4.5 | 7.17 | 1.55 | 40.92 | 6.61 | 3.67 | 12.79 | 3.4 | 23.13 | 18.89 | 23.52 | 41.97 | 11.61 | 1.56 | 25.68 | 41.95 | 15.71 | 5.4 | 15.75 | 8.22 | 1.25 | 9.6 | 4.99 | 5.59 | 11.11 | 4.41 | 3.1 | 43.17 | 13.44 | 8.58 |
AAL19585 (ybeF) | 24.21 | 36.06 | 56.2 | 19.53 | 11.07 | 10.09 | 31.67 | 24.98 | 20.78 | 11.38 | 34.87 | 14.77 | 114.34 | 19.18 | 29.33 | 42.77 | 39.07 | 86.36 | 81.7 | 93.16 | 16.47 | 18.34 | 8.91 | 60.35 | 69.05 | 91.83 | 13.3 | 40.32 | 29.39 | 4.08 | 19.58 | 19.29 | 29.57 | 36.92 | 158.74 | 8.12 | 157.34 | 17.29 | 30.65 |
AAL19653 (phrB) | 11.65 | 26.97 | 23.94 | 9.13 | 8.74 | 9.61 | 13.08 | 18.02 | 6.35 | 5.89 | 11.23 | 6.3 | 45.93 | 23.14 | 8.72 | 10.15 | 4.29 | 19.19 | 18.9 | 16.89 | 36.09 | 13.32 | 4.42 | 19.91 | 32.06 | 30.53 | 18.48 | 11.93 | 17.0 | 3.46 | 8.34 | 11.98 | 16.14 | 9.94 | 4.52 | 7.57 | 37.13 | 14.69 | 24.21 |
AAL19722 (ybhA) | 17.7 | 55.46 | 38.26 | 28.88 | 32.57 | 11.27 | 47.01 | 46.42 | 42.47 | 52.28 | 39.39 | 31.12 | 46.08 | 43.72 | 72.98 | 19.13 | 34.55 | 56.6 | 64.9 | 69.38 | 13.84 | 44.36 | 15.63 | 64.62 | 25.19 | 45.34 | 32.36 | 36.16 | 26.89 | 9.75 | 31.85 | 32.84 | 27.48 | 19.04 | 52.03 | 37.06 | 87.97 | 33.04 | 48.82 |
AAL19747 (STM0810) | 7.27 | 29.73 | 22.6 | 3.44 | 4.44 | 3.18 | 79.59 | 12.52 | 8.72 | 2.63 | 17.52 | 1.54 | 28.36 | 4.8 | 6.92 | 39.34 | 4.74 | 24.47 | 21.77 | 27.33 | 9.81 | 12.92 | 6.88 | 28.74 | 11.53 | 7.72 | 4.82 | 7.84 | 3.81 | 1.14 | 3.9 | 2.66 | 3.29 | 26.66 | 13.38 | 2.93 | 28.3 | 9.0 | 4.46 |
AAL19749 (ybhO) | 4.6 | 19.8 | 36.95 | 4.95 | 2.69 | 11.16 | 25.19 | 6.65 | 2.24 | 4.22 | 2.76 | 1.42 | 26.65 | 2.2 | 3.1 | 8.94 | 1.89 | 15.2 | 13.72 | 13.41 | 25.98 | 10.71 | 0.81 | 28.67 | 20.03 | 16.27 | 5.26 | 9.22 | 6.02 | 0.92 | 6.86 | 2.5 | 4.81 | 7.07 | 4.96 | 3.12 | 39.8 | 12.87 | 4.39 |
AAL19750 (ybhP) | 5.35 | 24.08 | 20.23 | 4.96 | 2.14 | 9.9 | 24.89 | 8.25 | 1.56 | 3.99 | 2.26 | 1.13 | 41.27 | 2.0 | 2.07 | 7.33 | 1.72 | 8.67 | 10.01 | 11.3 | 20.72 | 11.98 | 0.66 | 42.4 | 30.51 | 21.69 | 6.41 | 11.46 | 7.82 | 1.52 | 7.32 | 4.99 | 6.06 | 6.15 | 5.38 | 3.78 | 63.25 | 6.9 | 10.23 |
AAL19809 (ybjC) | 52.4 | 64.24 | 30.0 | 29.03 | 36.87 | 24.79 | 122.46 | 58.16 | 33.09 | 40.49 | 61.67 | 39.57 | 89.46 | 50.35 | 63.04 | 15.97 | 60.74 | 88.68 | 53.17 | 84.34 | 21.36 | 53.28 | 13.03 | 68.29 | 43.67 | 49.83 | 31.68 | 42.94 | 28.67 | 3.29 | 24.94 | 36.9 | 28.04 | 11.08 | 74.08 | 27.16 | 117.56 | 32.55 | 63.99 |
AAL19810 (mdaA) | 29.68 | 42.67 | 26.69 | 24.91 | 31.96 | 43.46 | 45.07 | 34.83 | 22.2 | 45.52 | 24.02 | 56.41 | 41.06 | 44.73 | 26.01 | 14.82 | 16.59 | 33.5 | 29.86 | 36.33 | 44.57 | 34.65 | 13.07 | 68.02 | 44.45 | 44.43 | 53.65 | 44.27 | 27.82 | 3.53 | 18.66 | 30.16 | 27.22 | 10.5 | 19.45 | 50.39 | 79.19 | 29.38 | 50.72 |
AAL19871 (poxB) | 8.49 | 28.07 | 56.38 | 13.04 | 8.0 | 12.78 | 35.3 | 11.6 | 7.59 | 25.58 | 10.54 | 3.43 | 69.77 | 5.56 | 10.02 | 16.31 | 4.5 | 26.75 | 32.46 | 28.44 | 26.73 | 12.21 | 0.56 | 26.69 | 34.23 | 29.72 | 6.43 | 36.38 | 15.17 | 2.2 | 27.03 | 7.59 | 11.35 | 11.18 | 14.7 | 6.3 | 32.4 | 15.91 | 17.27 |
AAL20005 (yccR) | 12.52 | 37.63 | 31.07 | 23.0 | 19.28 | 4.36 | 41.12 | 43.96 | 20.43 | 47.69 | 24.28 | 5.82 | 28.98 | 19.96 | 95.71 | 24.37 | 77.16 | 51.34 | 38.68 | 55.65 | 10.03 | 21.74 | 23.65 | 107.97 | 13.76 | 15.97 | 7.43 | 21.6 | 8.74 | 5.48 | 15.31 | 27.46 | 8.01 | 33.43 | 74.11 | 7.4 | 182.32 | 21.76 | 31.09 |
AAL20008 (helD) | 20.45 | 54.25 | 54.26 | 32.79 | 22.08 | 13.56 | 55.06 | 52.08 | 30.03 | 41.46 | 22.79 | 25.99 | 48.86 | 61.73 | 56.1 | 25.23 | 25.08 | 79.96 | 71.95 | 81.96 | 21.28 | 31.47 | 14.6 | 42.76 | 28.2 | 28.27 | 18.41 | 41.7 | 35.12 | 3.63 | 29.01 | 32.31 | 27.75 | 20.52 | 25.82 | 21.3 | 65.05 | 40.81 | 32.35 |
AAL20028 (copR) | 29.15 | 46.11 | 39.24 | 20.96 | 20.85 | 7.88 | 29.6 | 44.75 | 15.51 | 17.07 | 21.31 | 11.97 | 41.61 | 42.08 | 64.01 | 29.38 | 22.23 | 55.43 | 50.27 | 62.83 | 29.04 | 41.19 | 23.12 | 46.38 | 27.82 | 24.15 | 21.7 | 51.8 | 28.81 | 1.9 | 16.48 | 33.09 | 27.61 | 23.12 | 25.42 | 20.13 | 88.04 | 22.77 | 36.7 |
AAL20078 (ymdC) | 36.58 | 60.24 | 68.18 | 27.35 | 25.46 | 6.5 | 71.31 | 56.9 | 22.71 | 36.41 | 31.45 | 14.75 | 76.15 | 60.19 | 44.93 | 39.11 | 34.8 | 74.97 | 104.24 | 84.38 | 40.79 | 39.31 | 18.87 | 60.57 | 35.35 | 20.66 | 20.78 | 40.22 | 40.62 | 3.97 | 30.31 | 51.21 | 36.37 | 35.08 | 32.37 | 21.37 | 94.97 | 26.19 | 47.66 |
AAL20267 (btuD) | 20.36 | 43.1 | 48.43 | 18.86 | 37.56 | 19.93 | 24.47 | 30.18 | 16.6 | 29.93 | 15.06 | 33.49 | 71.47 | 35.07 | 19.49 | 16.8 | 8.5 | 35.53 | 41.44 | 40.02 | 46.37 | 26.35 | 8.2 | 50.94 | 32.66 | 36.18 | 21.79 | 33.1 | 21.32 | 3.18 | 9.5 | 28.86 | 18.41 | 15.1 | 16.78 | 26.29 | 83.13 | 49.41 | 42.09 |
AAL20360 (ydhL) | 22.98 | 172.19 | 212.69 | 17.9 | 23.06 | 8.09 | 62.34 | 40.96 | 20.3 | 20.92 | 26.8 | 3.08 | 230.58 | 20.86 | 26.6 | 71.92 | 40.92 | 67.16 | 40.41 | 66.7 | 124.03 | 133.12 | 14.22 | 110.29 | 148.63 | 37.0 | 14.95 | 46.77 | 14.06 | 3.92 | 14.61 | 43.61 | 9.8 | 76.91 | 56.74 | 15.61 | 162.7 | 54.47 | 76.82 |
AAL20364 (ydhJ) | 17.74 | 32.57 | 15.21 | 16.42 | 13.02 | 7.03 | 29.96 | 30.6 | 18.27 | 11.24 | 29.44 | 17.91 | 24.0 | 29.1 | 75.72 | 25.42 | 30.04 | 54.21 | 41.23 | 60.66 | 24.64 | 39.57 | 18.97 | 48.23 | 20.19 | 29.78 | 13.76 | 72.73 | 12.15 | 6.78 | 14.09 | 13.7 | 11.16 | 29.39 | 142.25 | 8.59 | 101.17 | 10.45 | 19.08 |
AAL20365 (ydhI) | 51.27 | 110.7 | 56.73 | 21.83 | 52.01 | 7.51 | 54.48 | 58.81 | 37.53 | 35.16 | 83.91 | 17.39 | 104.64 | 32.5 | 82.09 | 98.83 | 29.4 | 73.79 | 101.45 | 106.22 | 38.35 | 38.76 | 124.88 | 501.61 | 26.44 | 37.09 | 37.35 | 365.61 | 19.63 | 18.05 | 44.22 | 60.62 | 14.35 | 130.64 | 49.61 | 22.25 | 562.3 | 47.13 | 70.73 |
AAL20400 (STM1481) | 19.07 | 23.2 | 13.27 | 11.84 | 9.0 | 3.45 | 20.07 | 27.15 | 21.61 | 13.65 | 35.55 | 7.63 | 20.42 | 21.1 | 28.36 | 10.62 | 9.21 | 46.48 | 48.14 | 62.95 | 4.16 | 10.34 | 10.68 | 71.82 | 9.79 | 13.13 | 10.06 | 24.64 | 12.12 | 5.83 | 17.22 | 10.51 | 15.72 | 15.27 | 15.52 | 7.56 | 106.57 | 12.91 | 16.91 |
AAL20420 (ynfC) | 34.76 | 76.03 | 69.03 | 34.46 | 28.81 | 9.09 | 55.71 | 60.94 | 20.0 | 37.8 | 19.8 | 19.61 | 54.3 | 41.59 | 88.91 | 50.78 | 28.66 | 112.4 | 98.22 | 126.49 | 23.72 | 57.84 | 48.9 | 121.95 | 23.32 | 20.69 | 30.43 | 47.96 | 25.94 | 3.29 | 31.73 | 42.82 | 27.65 | 55.64 | 37.65 | 30.76 | 140.0 | 43.54 | 46.39 |
AAL20436 (ydeD) | 9.58 | 29.55 | 17.32 | 8.84 | 10.45 | 3.68 | 19.07 | 21.25 | 7.01 | 9.09 | 8.86 | 4.38 | 19.07 | 40.32 | 16.03 | 9.3 | 23.47 | 35.58 | 30.77 | 36.28 | 8.91 | 5.31 | 7.99 | 46.09 | 20.16 | 13.15 | 18.58 | 17.96 | 10.06 | 0.77 | 8.87 | 11.91 | 11.26 | 11.48 | 14.82 | 16.97 | 66.97 | 14.94 | 22.13 |
AAL20479 (STM1561) | 6.38 | 21.43 | 40.06 | 9.92 | 16.93 | 12.43 | 38.33 | 19.15 | 2.7 | 5.2 | 4.5 | 1.17 | 84.14 | 4.65 | 13.66 | 16.61 | 3.23 | 37.98 | 38.71 | 34.63 | 16.48 | 10.11 | 1.3 | 30.99 | 22.68 | 34.86 | 6.73 | 15.17 | 8.24 | 0.81 | 10.74 | 10.47 | 5.05 | 14.07 | 5.46 | 3.12 | 60.68 | 35.94 | 17.23 |
AAL20505 (yncD) | 7.37 | 21.62 | 36.18 | 7.78 | 8.14 | 8.56 | 33.45 | 11.93 | 5.68 | 6.87 | 8.53 | 2.5 | 28.55 | 9.88 | 9.65 | 14.59 | 8.0 | 37.88 | 41.99 | 34.05 | 6.55 | 13.05 | 2.29 | 33.58 | 8.84 | 25.74 | 7.43 | 13.31 | 3.79 | 3.69 | 11.54 | 8.16 | 3.71 | 19.53 | 11.01 | 6.32 | 52.85 | 14.73 | 8.65 |
AAL20528 (ydcK) | 7.1 | 25.34 | 33.82 | 7.31 | 5.36 | 4.76 | 19.06 | 14.21 | 5.35 | 8.18 | 6.94 | 2.45 | 32.39 | 9.37 | 11.25 | 24.15 | 6.24 | 14.43 | 14.28 | 15.17 | 18.41 | 14.45 | 8.03 | 34.44 | 20.34 | 11.71 | 4.39 | 16.92 | 9.73 | 0.95 | 9.13 | 8.65 | 8.5 | 25.29 | 11.57 | 4.9 | 60.39 | 13.2 | 13.81 |
AAL20573 (dbpA) | 40.47 | 32.24 | 33.97 | 16.85 | 16.21 | 15.89 | 35.18 | 34.26 | 22.84 | 9.1 | 30.38 | 26.83 | 51.51 | 41.82 | 22.26 | 13.79 | 9.64 | 47.93 | 42.67 | 45.08 | 41.27 | 19.84 | 3.06 | 45.88 | 38.33 | 38.65 | 66.41 | 22.42 | 24.66 | 2.95 | 12.97 | 11.03 | 28.16 | 10.44 | 17.66 | 37.17 | 52.94 | 19.37 | 24.54 |
AAL20574 (STM1656) | 34.06 | 49.79 | 51.43 | 28.57 | 17.12 | 7.7 | 70.65 | 48.53 | 19.81 | 25.71 | 28.8 | 18.62 | 45.65 | 48.9 | 47.95 | 20.48 | 28.86 | 71.73 | 71.88 | 76.83 | 28.41 | 29.77 | 13.15 | 62.68 | 37.52 | 30.16 | 23.83 | 38.53 | 36.47 | 2.0 | 19.1 | 26.72 | 33.91 | 16.83 | 55.59 | 22.7 | 88.29 | 26.35 | 32.41 |
AAL20590 (STM1673) | 77.06 | 192.08 | 377.18 | 40.17 | 64.87 | 17.63 | 133.43 | 219.38 | 34.1 | 71.63 | 51.72 | 33.08 | 140.38 | 105.09 | 124.93 | 110.17 | 136.04 | 227.09 | 251.42 | 295.48 | 92.85 | 125.76 | 69.57 | 144.88 | 121.07 | 36.45 | 26.98 | 149.78 | 37.64 | 14.68 | 65.89 | 99.84 | 37.04 | 91.29 | 120.01 | 31.03 | 468.45 | 114.66 | 104.02 |
AAL20634 (sohB) | 35.99 | 59.15 | 55.04 | 50.74 | 42.29 | 19.39 | 47.32 | 77.13 | 32.36 | 45.96 | 34.45 | 33.53 | 52.17 | 97.27 | 69.61 | 49.0 | 48.11 | 84.12 | 73.93 | 86.28 | 53.93 | 47.41 | 40.74 | 71.94 | 58.28 | 38.76 | 61.69 | 57.0 | 74.02 | 7.33 | 37.95 | 48.87 | 74.76 | 36.17 | 50.02 | 45.9 | 125.27 | 52.23 | 67.22 |
AAL20657 (cls) | 14.53 | 34.08 | 25.87 | 16.75 | 11.08 | 6.36 | 22.12 | 21.51 | 12.48 | 26.06 | 15.53 | 16.17 | 23.66 | 27.37 | 25.15 | 10.67 | 9.25 | 33.1 | 29.91 | 37.48 | 4.61 | 16.8 | 7.76 | 37.66 | 7.94 | 23.85 | 19.68 | 26.7 | 23.19 | 4.28 | 17.55 | 16.33 | 27.95 | 14.0 | 13.99 | 20.29 | 44.85 | 15.47 | 21.34 |
AAL20896 (yedP) | 5.8 | 20.93 | 35.9 | 8.85 | 5.88 | 8.26 | 22.55 | 12.05 | 5.58 | 6.98 | 12.64 | 1.89 | 55.77 | 8.79 | 5.38 | 24.51 | 6.72 | 34.08 | 25.29 | 29.14 | 40.67 | 11.0 | 2.45 | 42.72 | 37.16 | 22.84 | 5.31 | 18.93 | 22.39 | 0.61 | 10.15 | 5.34 | 24.44 | 21.93 | 17.83 | 2.6 | 70.6 | 16.09 | 14.49 |
AAL20897 (STM1987) | 12.2 | 24.84 | 31.98 | 15.02 | 12.29 | 8.43 | 18.49 | 21.4 | 10.09 | 10.26 | 15.82 | 4.78 | 51.83 | 26.55 | 10.46 | 14.31 | 9.33 | 32.58 | 34.93 | 37.17 | 24.59 | 15.53 | 6.05 | 26.28 | 25.42 | 24.68 | 7.67 | 16.63 | 27.54 | 3.32 | 13.12 | 11.5 | 38.1 | 14.99 | 11.29 | 5.11 | 36.11 | 27.86 | 26.29 |
AAL20899 (yedI) | 15.85 | 47.66 | 22.07 | 28.52 | 19.35 | 9.95 | 36.95 | 39.93 | 20.28 | 18.41 | 22.37 | 25.25 | 32.96 | 59.38 | 40.34 | 19.46 | 31.04 | 42.95 | 40.29 | 48.73 | 17.07 | 30.19 | 13.63 | 69.33 | 37.05 | 30.01 | 30.67 | 27.05 | 52.69 | 4.8 | 20.5 | 19.88 | 72.98 | 19.25 | 33.52 | 25.27 | 93.72 | 17.88 | 32.18 |
AAL20900 (yedA) | 9.66 | 24.06 | 7.0 | 14.6 | 6.88 | 1.07 | 7.89 | 15.92 | 7.79 | 3.82 | 11.45 | 5.63 | 10.96 | 21.29 | 8.07 | 4.64 | 4.76 | 6.6 | 8.75 | 9.06 | 7.96 | 9.08 | 3.73 | 30.56 | 21.51 | 5.17 | 20.58 | 9.68 | 38.55 | 0.95 | 9.16 | 7.77 | 57.88 | 2.91 | 8.01 | 11.07 | 56.21 | 6.11 | 20.29 |
AAL21067 (yehX) | 34.36 | 37.22 | 37.47 | 14.16 | 15.23 | 12.27 | 11.79 | 15.06 | 12.12 | 11.3 | 20.33 | 5.9 | 53.51 | 19.9 | 12.8 | 17.23 | 6.02 | 26.13 | 27.74 | 24.24 | 22.5 | 18.78 | 2.53 | 18.5 | 23.32 | 34.66 | 13.08 | 36.62 | 30.58 | 2.27 | 10.89 | 11.58 | 25.85 | 16.9 | 10.98 | 10.12 | 23.85 | 22.57 | 24.58 |
AAL21068 (yehY) | 11.6 | 50.36 | 54.44 | 15.17 | 14.51 | 11.64 | 20.02 | 18.79 | 8.16 | 11.89 | 10.64 | 5.81 | 82.2 | 13.74 | 19.3 | 13.49 | 11.61 | 41.56 | 41.56 | 40.59 | 21.17 | 31.79 | 1.2 | 40.26 | 26.91 | 40.34 | 14.66 | 37.83 | 24.48 | 1.76 | 13.74 | 13.75 | 19.84 | 9.68 | 15.91 | 9.1 | 54.95 | 25.47 | 31.65 |
AAL21075 (yohF) | 10.75 | 32.57 | 68.28 | 9.35 | 17.44 | 7.25 | 23.15 | 19.29 | 10.12 | 9.78 | 12.17 | 4.18 | 69.15 | 15.65 | 6.21 | 18.77 | 7.71 | 17.99 | 17.96 | 17.58 | 60.22 | 12.44 | 2.29 | 20.96 | 52.99 | 26.54 | 9.93 | 26.42 | 22.09 | 0.84 | 12.14 | 13.35 | 15.57 | 10.53 | 9.33 | 7.88 | 32.31 | 28.44 | 25.16 |
AAL21213 (elaA) | 23.29 | 61.86 | 57.58 | 37.34 | 48.56 | 58.06 | 74.34 | 59.18 | 34.71 | 48.73 | 25.36 | 21.72 | 68.52 | 69.39 | 68.15 | 27.65 | 38.87 | 56.05 | 44.3 | 61.92 | 32.05 | 18.11 | 31.98 | 66.54 | 49.07 | 23.46 | 44.27 | 54.57 | 22.54 | 4.79 | 25.45 | 57.6 | 17.83 | 26.39 | 48.62 | 56.44 | 120.61 | 88.6 | 75.82 |
AAL21294 (yfdC) | 6.26 | 31.24 | 50.47 | 6.32 | 9.32 | 2.73 | 21.1 | 14.77 | 4.75 | 7.54 | 11.24 | 1.45 | 72.51 | 4.94 | 9.76 | 58.42 | 5.1 | 20.33 | 31.23 | 23.34 | 34.39 | 19.54 | 9.64 | 48.6 | 29.85 | 9.06 | 5.57 | 20.74 | 6.05 | 1.19 | 12.87 | 13.59 | 4.7 | 75.11 | 3.98 | 3.67 | 73.48 | 24.9 | 28.93 |
AAL21304 (STM2404) | 9.59 | 32.3 | 39.98 | 9.03 | 13.53 | 10.97 | 7.92 | 18.47 | 15.12 | 11.18 | 18.58 | 9.99 | 51.81 | 19.96 | 14.91 | 7.11 | 10.41 | 18.81 | 17.43 | 21.0 | 23.58 | 16.61 | 1.69 | 33.66 | 25.78 | 25.02 | 16.37 | 15.96 | 12.63 | 2.5 | 8.09 | 20.48 | 10.5 | 6.81 | 14.36 | 9.94 | 55.4 | 14.07 | 30.85 |
AAL21557 (STM2668) | 17.15 | 34.58 | 41.27 | 14.23 | 10.08 | 12.89 | 35.98 | 34.62 | 10.94 | 9.98 | 15.77 | 8.02 | 65.89 | 39.66 | 17.33 | 26.95 | 10.09 | 29.43 | 28.8 | 29.33 | 42.27 | 25.55 | 8.82 | 39.34 | 42.79 | 25.05 | 10.75 | 24.82 | 20.0 | 1.1 | 15.03 | 13.87 | 22.36 | 25.04 | 13.65 | 9.98 | 69.56 | 17.35 | 25.46 |
AAL21572 (yfjB) | 36.49 | 60.13 | 74.66 | 39.31 | 44.15 | 14.76 | 71.3 | 61.26 | 29.8 | 33.7 | 38.34 | 27.67 | 91.3 | 50.8 | 95.52 | 28.05 | 38.29 | 57.93 | 62.28 | 68.79 | 37.13 | 41.29 | 21.82 | 68.64 | 43.76 | 45.71 | 37.63 | 49.58 | 42.25 | 3.51 | 22.58 | 57.63 | 37.74 | 22.81 | 67.54 | 38.47 | 114.22 | 38.15 | 76.37 |
AAL21711 (mltB) | 32.85 | 63.74 | 41.09 | 25.5 | 15.59 | 26.31 | 64.37 | 48.0 | 34.72 | 28.46 | 45.2 | 44.24 | 81.68 | 66.11 | 85.39 | 17.34 | 43.34 | 36.93 | 37.59 | 42.91 | 32.39 | 55.95 | 8.94 | 56.52 | 46.29 | 69.9 | 38.4 | 40.92 | 20.62 | 9.41 | 21.93 | 25.35 | 22.04 | 12.1 | 52.19 | 25.62 | 88.81 | 25.85 | 55.05 |
AAL21838 (barA) | 17.55 | 36.95 | 19.39 | 25.77 | 26.0 | 6.11 | 28.5 | 40.31 | 18.31 | 22.85 | 25.23 | 35.56 | 29.5 | 37.63 | 76.82 | 17.99 | 24.09 | 37.57 | 35.37 | 42.15 | 12.16 | 19.3 | 28.68 | 40.48 | 11.31 | 20.07 | 18.75 | 28.32 | 29.52 | 5.31 | 20.45 | 35.67 | 25.47 | 20.74 | 41.01 | 23.34 | 68.96 | 22.64 | 55.91 |
AAL22037 (yqhC) | 21.43 | 38.96 | 27.1 | 15.76 | 8.18 | 4.19 | 51.02 | 40.81 | 28.48 | 26.36 | 48.04 | 20.55 | 27.5 | 31.13 | 77.33 | 13.19 | 82.35 | 95.5 | 60.5 | 97.35 | 9.51 | 32.0 | 11.98 | 37.3 | 12.76 | 37.0 | 17.98 | 45.58 | 9.28 | 9.09 | 18.42 | 14.69 | 10.62 | 22.29 | 115.1 | 20.94 | 67.85 | 16.22 | 18.61 |
AAL22094 (ygjP) | 36.87 | 58.6 | 39.47 | 26.91 | 25.19 | 9.85 | 47.01 | 50.26 | 36.5 | 28.32 | 47.57 | 27.63 | 55.54 | 49.52 | 103.37 | 14.0 | 41.93 | 49.16 | 41.34 | 56.59 | 19.97 | 42.41 | 11.23 | 46.9 | 26.17 | 24.83 | 25.57 | 39.6 | 29.52 | 11.44 | 20.19 | 39.78 | 31.36 | 14.79 | 57.86 | 32.31 | 65.17 | 25.93 | 53.35 |
AAL22108 (yhaJ) | 29.42 | 43.15 | 34.14 | 26.07 | 17.92 | 17.89 | 23.33 | 39.95 | 23.87 | 35.67 | 26.95 | 36.17 | 32.71 | 53.71 | 49.17 | 9.5 | 24.67 | 59.31 | 58.82 | 65.5 | 14.08 | 22.91 | 5.01 | 58.93 | 33.19 | 41.62 | 52.09 | 40.81 | 25.81 | 6.03 | 21.06 | 25.39 | 27.14 | 6.74 | 25.25 | 71.35 | 90.26 | 30.39 | 45.14 |
AAL22413 (ugpQ) | 23.51 | 60.59 | 95.02 | 22.77 | 24.27 | 14.63 | 57.77 | 55.83 | 10.32 | 28.78 | 7.92 | 31.26 | 105.27 | 55.95 | 60.64 | 47.97 | 54.86 | 73.89 | 68.15 | 87.2 | 25.1 | 38.67 | 5.41 | 67.02 | 25.73 | 22.04 | 25.99 | 30.75 | 22.04 | 1.7 | 20.6 | 22.57 | 22.01 | 25.01 | 118.27 | 24.26 | 100.31 | 36.43 | 38.09 |
AAL22546 (mtlR) | 33.33 | 84.06 | 65.25 | 20.74 | 30.7 | 10.49 | 39.69 | 41.77 | 50.28 | 33.43 | 79.63 | 31.93 | 185.96 | 60.09 | 66.72 | 33.52 | 27.31 | 50.03 | 41.53 | 66.89 | 33.07 | 95.67 | 10.39 | 56.55 | 28.82 | 38.8 | 40.83 | 49.76 | 31.18 | 14.48 | 25.12 | 36.54 | 25.03 | 31.97 | 46.51 | 30.58 | 87.76 | 37.64 | 72.99 |
AAL22613 (rhuM) | 44.52 | 53.66 | 75.6 | 31.26 | 40.1 | 8.84 | 37.85 | 45.27 | 36.24 | 33.49 | 42.98 | 30.02 | 79.95 | 30.15 | 73.11 | 20.4 | 33.13 | 55.23 | 49.63 | 68.47 | 11.71 | 28.41 | 24.36 | 37.25 | 19.71 | 34.76 | 31.68 | 42.83 | 36.25 | 5.36 | 28.87 | 73.56 | 30.78 | 20.89 | 30.16 | 36.26 | 58.88 | 47.59 | 65.56 |
AAL22624 (STM3766) | 11.18 | 18.11 | 16.9 | 8.17 | 9.86 | 2.61 | 23.99 | 23.91 | 14.29 | 10.78 | 25.84 | 2.22 | 25.1 | 14.78 | 41.18 | 13.09 | 51.29 | 18.79 | 14.34 | 20.9 | 4.02 | 8.59 | 10.92 | 52.68 | 5.82 | 10.12 | 8.58 | 12.3 | 4.24 | 2.6 | 10.72 | 12.22 | 4.33 | 18.29 | 50.79 | 8.74 | 97.54 | 19.92 | 15.4 |
AAL22631 (STM3773) | 15.29 | 41.32 | 27.22 | 21.37 | 23.32 | 8.76 | 25.65 | 38.19 | 22.66 | 31.8 | 26.44 | 18.75 | 24.23 | 50.32 | 48.97 | 13.73 | 41.11 | 26.67 | 29.13 | 32.92 | 9.97 | 28.5 | 20.42 | 42.46 | 10.87 | 20.58 | 20.31 | 20.71 | 16.6 | 4.68 | 14.33 | 30.38 | 13.12 | 13.95 | 47.9 | 19.27 | 76.16 | 23.96 | 61.97 |
AAL22707 (yieE) | 32.81 | 35.97 | 12.86 | 30.55 | 18.95 | 7.64 | 30.81 | 39.38 | 18.89 | 28.23 | 22.43 | 10.01 | 18.58 | 15.95 | 55.03 | 21.76 | 46.11 | 38.3 | 47.61 | 45.72 | 7.67 | 14.64 | 24.33 | 69.62 | 12.85 | 18.71 | 24.67 | 33.14 | 21.17 | 5.06 | 13.38 | 23.01 | 25.18 | 22.81 | 57.62 | 24.7 | 104.1 | 19.94 | 27.09 |
AAL22746 (yieP) | 51.66 | 74.47 | 56.2 | 65.56 | 28.1 | 9.28 | 72.61 | 62.32 | 37.65 | 43.43 | 41.45 | 35.67 | 54.59 | 37.63 | 255.88 | 31.17 | 94.18 | 74.9 | 48.99 | 79.07 | 13.74 | 39.45 | 35.15 | 108.46 | 26.97 | 32.0 | 35.89 | 64.75 | 58.5 | 24.63 | 29.92 | 52.15 | 58.27 | 33.43 | 114.12 | 42.64 | 228.09 | 41.56 | 56.72 |
AAL22831 (hemG) | 57.77 | 80.26 | 80.39 | 74.55 | 70.73 | 41.83 | 147.49 | 90.88 | 44.6 | 70.0 | 52.58 | 60.2 | 78.64 | 92.45 | 129.23 | 59.93 | 67.85 | 75.3 | 77.06 | 80.66 | 39.21 | 36.34 | 48.4 | 84.63 | 26.73 | 89.37 | 40.74 | 75.45 | 57.59 | 14.92 | 35.19 | 64.38 | 58.58 | 68.25 | 78.37 | 39.5 | 125.62 | 76.36 | 78.75 |
AAL22832 (mobB) | 33.19 | 55.73 | 43.72 | 44.46 | 26.07 | 7.49 | 72.27 | 69.1 | 25.08 | 22.79 | 26.53 | 20.27 | 45.56 | 37.02 | 278.29 | 33.12 | 115.16 | 82.03 | 67.5 | 85.58 | 16.93 | 24.53 | 35.72 | 170.88 | 16.59 | 16.5 | 31.3 | 45.67 | 29.28 | 1.71 | 12.18 | 44.84 | 24.03 | 33.47 | 147.94 | 55.62 | 317.84 | 30.91 | 73.07 |
AAL22833 (mobA) | 26.88 | 73.13 | 41.27 | 45.82 | 35.56 | 8.76 | 65.73 | 50.13 | 36.3 | 35.84 | 43.69 | 28.22 | 53.61 | 38.18 | 103.19 | 22.33 | 78.17 | 54.1 | 42.91 | 64.23 | 12.34 | 36.42 | 24.32 | 119.5 | 23.16 | 24.05 | 38.62 | 45.71 | 41.96 | 7.35 | 24.65 | 59.98 | 38.24 | 20.77 | 102.3 | 67.26 | 216.47 | 35.22 | 72.07 |
AAL22923 (yiiR) | 58.76 | 76.69 | 67.55 | 38.39 | 35.41 | 3.62 | 63.28 | 73.6 | 37.89 | 33.86 | 53.17 | 26.24 | 56.44 | 41.94 | 111.4 | 15.92 | 70.23 | 121.47 | 55.83 | 110.77 | 21.2 | 43.8 | 13.55 | 124.38 | 26.41 | 22.48 | 40.2 | 39.54 | 43.42 | 3.11 | 31.02 | 71.95 | 40.04 | 9.45 | 103.84 | 35.6 | 221.57 | 51.88 | 73.01 |
AAL22971 (birA) | 42.74 | 74.85 | 34.26 | 49.37 | 32.88 | 9.25 | 88.15 | 66.56 | 51.14 | 44.92 | 58.0 | 53.05 | 40.2 | 60.97 | 116.62 | 48.81 | 118.12 | 79.0 | 75.6 | 80.51 | 21.02 | 29.7 | 93.59 | 111.74 | 22.99 | 37.37 | 41.65 | 34.68 | 45.56 | 14.84 | 28.4 | 41.02 | 44.49 | 64.61 | 174.57 | 37.97 | 187.42 | 41.77 | 57.46 |
AAL22994 (yjaD) | 37.41 | 55.57 | 46.18 | 37.36 | 30.28 | 11.7 | 77.49 | 48.94 | 37.41 | 30.06 | 53.81 | 31.39 | 81.97 | 57.89 | 60.79 | 24.0 | 38.81 | 73.9 | 60.92 | 66.46 | 27.74 | 39.14 | 14.33 | 44.83 | 34.92 | 57.71 | 27.18 | 43.78 | 44.7 | 2.8 | 18.39 | 39.57 | 45.73 | 17.84 | 58.74 | 25.93 | 62.55 | 40.45 | 74.12 |
AAL23077 (STM4253) | 22.4 | 22.41 | 9.82 | 19.06 | 13.18 | 1.95 | 34.8 | 21.94 | 7.82 | 5.91 | 18.13 | 6.01 | 45.08 | 20.24 | 72.85 | 8.24 | 10.8 | 64.9 | 55.86 | 76.88 | 11.32 | 4.84 | 5.94 | 43.86 | 8.8 | 7.34 | 6.11 | 20.45 | 11.89 | 1.36 | 10.91 | 18.38 | 11.07 | 7.05 | 110.18 | 3.99 | 107.31 | 11.72 | 38.56 |
AAL23395 (nadR) | 53.75 | 79.51 | 97.49 | 53.75 | 52.35 | 32.08 | 114.85 | 101.0 | 82.26 | 76.56 | 78.71 | 70.22 | 109.22 | 109.69 | 105.76 | 76.21 | 66.08 | 121.65 | 101.44 | 137.89 | 38.52 | 45.4 | 58.71 | 69.93 | 46.98 | 79.5 | 45.95 | 74.34 | 45.75 | 10.39 | 44.46 | 76.62 | 31.96 | 94.98 | 95.23 | 42.58 | 99.27 | 86.1 | 87.75 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)