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Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19204 (yaeJ) | 69.06 | 85.19 | 104.42 | 53.15 | 54.37 | 23.56 | 134.26 | 118.87 | 68.55 | 48.11 | 104.14 | 66.54 | 93.61 | 96.17 | 55.76 | 35.77 | 55.5 | 73.27 | 69.12 | 75.73 | 63.44 | 93.97 | 31.26 | 78.81 | 45.12 | 51.58 | 65.35 | 112.59 | 62.75 | 19.32 | 65.69 | 88.32 | 66.94 | 25.67 | 68.39 | 76.84 | 65.34 | 60.44 | 76.64 |
AAL19231 (STM0274A) | 8.68 | 0.0 | 15.72 | 1.88 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 3.19 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 8.1 | 0.0 | 0.0 | 0.0 | 10.97 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
AAL19313 (STM0359) | 142.84 | 2.24 | 1027.96 | 5.07 | 92.96 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1713.99 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 654.04 | 0.0 | 0.0 | 0.0 | 1850.78 | 0.0 | 0.0 | 900.18 | 0.0 | 0.0 | 0.0 | 117.07 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 607.52 | 81.82 |
AAL19322 (prpB) | 3.45 | 26.31 | 18.64 | 2.52 | 3.42 | 3.42 | 2.34 | 40.7 | 4.49 | 64.61 | 6.55 | 1.99 | 22.65 | 4.59 | 1.9 | 0.79 | 13.09 | 3.62 | 4.13 | 4.62 | 3.89 | 8.74 | 0.12 | 29.31 | 5.38 | 4.0 | 4.87 | 12.16 | 2.51 | 1.03 | 5.86 | 5.33 | 2.61 | 0.46 | 6.38 | 3.6 | 43.27 | 3.31 | 15.96 |
AAL19323 (prpC) | 2.71 | 22.24 | 21.91 | 2.28 | 3.87 | 2.53 | 2.02 | 29.99 | 4.43 | 82.06 | 6.81 | 1.17 | 29.01 | 3.38 | 1.8 | 4.05 | 2.57 | 3.09 | 3.81 | 3.87 | 2.37 | 12.6 | 1.81 | 29.18 | 5.41 | 3.07 | 3.63 | 9.51 | 1.63 | 1.02 | 10.65 | 2.99 | 1.72 | 2.76 | 3.54 | 2.45 | 36.05 | 5.53 | 8.38 |
AAL19324 (prpD) | 2.35 | 20.58 | 21.18 | 2.19 | 5.78 | 2.69 | 1.75 | 21.83 | 3.77 | 92.52 | 4.24 | 1.07 | 25.87 | 4.43 | 1.96 | 2.55 | 2.12 | 3.61 | 3.56 | 4.5 | 2.53 | 9.34 | 1.43 | 18.63 | 3.34 | 2.59 | 3.71 | 11.57 | 1.59 | 0.82 | 7.56 | 4.28 | 1.66 | 2.06 | 2.77 | 3.18 | 27.74 | 6.76 | 8.46 |
AAL19325 (prpE) | 7.57 | 22.87 | 18.67 | 3.03 | 5.59 | 3.48 | 2.98 | 36.07 | 5.46 | 81.85 | 7.12 | 1.95 | 22.88 | 7.09 | 2.78 | 2.46 | 5.48 | 5.07 | 5.17 | 6.36 | 4.99 | 11.0 | 1.11 | 32.83 | 4.21 | 3.66 | 4.19 | 7.65 | 2.9 | 0.59 | 7.08 | 5.15 | 2.74 | 1.88 | 5.35 | 3.29 | 43.01 | 7.44 | 8.61 |
AAL19332 (yaiY) | 45.12 | 85.9 | 76.53 | 37.81 | 49.46 | 49.53 | 101.36 | 102.24 | 38.31 | 33.51 | 50.33 | 11.53 | 52.87 | 34.3 | 34.6 | 77.56 | 19.53 | 41.61 | 45.78 | 56.07 | 101.01 | 99.23 | 110.32 | 150.65 | 77.8 | 29.18 | 50.85 | 102.4 | 79.68 | 4.4 | 59.53 | 42.08 | 96.46 | 58.28 | 28.81 | 22.53 | 336.88 | 58.61 | 37.21 |
AAL19413 (STM0458) | 9.77 | 18.72 | 50.14 | 14.88 | 20.98 | 4.89 | 10.76 | 18.5 | 49.64 | 8.86 | 38.98 | 4.49 | 85.33 | 13.63 | 5.73 | 16.14 | 114.92 | 12.48 | 14.81 | 15.72 | 4.76 | 9.97 | 3.93 | 32.31 | 6.29 | 6.95 | 30.15 | 11.68 | 5.65 | 6.05 | 8.97 | 18.87 | 5.93 | 8.12 | 13.68 | 6.29 | 77.2 | 22.11 | 20.27 |
AAL19490 (ppiB) | 429.68 | 587.72 | 465.97 | 602.82 | 334.86 | 580.51 | 1019.97 | 494.31 | 471.77 | 733.19 | 511.22 | 640.21 | 375.42 | 532.97 | 859.13 | 359.23 | 871.55 | 215.51 | 224.8 | 272.74 | 160.62 | 343.84 | 307.97 | 488.72 | 313.99 | 877.12 | 729.82 | 473.18 | 507.61 | 1192.54 | 185.08 | 448.13 | 497.11 | 322.02 | 862.6 | 888.67 | 470.24 | 375.46 | 531.75 |
AAL19497 (fimA) | 47.06 | 105.5 | 572.38 | 123.78 | 4.65 | 69.64 | 35.11 | 47.54 | 49.73 | 1055.9 | 97.7 | 2.23 | 26.5 | 11.85 | 578.34 | 41.23 | 75.64 | 340.28 | 436.58 | 517.15 | 3.79 | 19.59 | 301.77 | 27.63 | 19.01 | 210.47 | 37.41 | 336.39 | 86.3 | 59.65 | 583.8 | 491.57 | 103.33 | 94.44 | 1.69 | 46.76 | 50.81 | 11.83 | 9.18 |
AAL19624 (asnB) | 40.86 | 107.46 | 72.21 | 174.86 | 27.99 | 48.13 | 43.83 | 113.29 | 48.05 | 79.32 | 47.01 | 25.59 | 35.98 | 145.41 | 46.7 | 35.98 | 35.21 | 31.3 | 61.56 | 42.16 | 87.52 | 73.68 | 18.28 | 40.29 | 34.92 | 78.94 | 29.7 | 55.09 | 686.16 | 5.25 | 70.18 | 37.39 | 413.7 | 17.32 | 76.38 | 16.47 | 105.33 | 42.74 | 35.77 |
AAL19651 (STM0707) | 2.14 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 8.15 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
AAL19659 (STM0715) | 34.59 | 5.53 | 42.0 | 4.62 | 23.67 | 0.85 | 0.0 | 0.0 | 6.51 | 0.0 | 10.46 | 0.0 | 79.38 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 146.18 | 0.0 | 0.0 | 0.0 | 153.33 | 0.0 | 0.0 | 21.72 | 0.0 | 3.13 | 0.0 | 18.22 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 29.39 | 38.9 |
AAL19686 (ybgT) | 20.54 | 2.29 | 69.03 | 0.92 | 25.17 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 91.61 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 78.96 | 0.0 | 0.0 | 0.0 | 16.32 | 0.0 | 0.0 | 29.93 | 0.0 | 0.0 | 0.0 | 46.7 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 21.08 | 55.5 |
AAL20059 (STM1128) | 40.55 | 18.55 | 65.34 | 44.19 | 42.08 | 3.39 | 4.5 | 14.35 | 19.92 | 40.77 | 38.21 | 1.24 | 36.15 | 7.6 | 9.16 | 72.03 | 127.85 | 200.36 | 167.09 | 250.93 | 7.48 | 6.56 | 41.24 | 77.0 | 7.12 | 16.07 | 2.35 | 44.78 | 27.85 | 17.31 | 5.81 | 29.63 | 33.01 | 89.95 | 27.97 | 1.76 | 151.1 | 27.69 | 24.14 |
AAL20060 (STM1129) | 70.27 | 31.13 | 19.41 | 49.23 | 123.06 | 1.95 | 1.13 | 12.05 | 31.91 | 19.07 | 41.51 | 1.39 | 8.31 | 2.95 | 19.92 | 12.27 | 144.62 | 11.12 | 6.47 | 11.07 | 2.9 | 6.73 | 11.22 | 25.56 | 6.53 | 4.42 | 1.82 | 11.7 | 1.87 | 1.5 | 4.95 | 12.09 | 2.32 | 16.1 | 27.62 | 1.57 | 87.63 | 8.76 | 13.13 |
AAL20061 (STM1130) | 43.46 | 26.85 | 17.79 | 46.69 | 48.11 | 0.61 | 1.03 | 15.26 | 10.37 | 11.06 | 18.04 | 0.43 | 4.82 | 0.66 | 14.62 | 4.06 | 252.54 | 10.12 | 7.38 | 11.85 | 0.75 | 1.79 | 5.17 | 61.15 | 2.97 | 1.19 | 1.15 | 8.28 | 0.67 | 0.47 | 1.54 | 5.53 | 0.82 | 8.36 | 56.24 | 1.01 | 184.87 | 3.76 | 6.39 |
AAL20062 (STM1131) | 35.72 | 12.9 | 47.0 | 40.51 | 36.86 | 0.46 | 0.99 | 22.3 | 9.94 | 11.0 | 17.51 | 0.11 | 8.89 | 1.19 | 11.14 | 4.19 | 369.7 | 9.3 | 5.85 | 8.53 | 1.15 | 3.01 | 8.22 | 60.36 | 3.33 | 1.13 | 1.66 | 8.48 | 0.89 | 0.73 | 1.19 | 6.98 | 1.03 | 8.13 | 61.37 | 0.85 | 207.9 | 4.68 | 5.42 |
AAL20064 (STM1133) | 42.33 | 31.06 | 95.15 | 24.71 | 34.03 | 8.48 | 29.05 | 34.82 | 20.72 | 34.86 | 21.9 | 4.37 | 43.14 | 19.1 | 36.34 | 21.9 | 271.17 | 51.55 | 38.66 | 54.38 | 18.27 | 11.29 | 11.15 | 50.95 | 11.64 | 13.45 | 10.81 | 31.11 | 12.17 | 8.68 | 21.08 | 26.97 | 11.45 | 21.71 | 30.81 | 9.39 | 121.54 | 27.36 | 21.44 |
AAL20141 (ycfJ) | 45.98 | 70.02 | 43.36 | 38.03 | 59.78 | 23.25 | 246.24 | 59.63 | 21.83 | 37.08 | 35.5 | 18.42 | 62.96 | 20.86 | 33.37 | 77.64 | 19.09 | 59.91 | 69.07 | 64.36 | 37.35 | 27.11 | 109.22 | 97.44 | 25.63 | 37.46 | 82.04 | 73.06 | 39.81 | 6.43 | 28.52 | 37.05 | 52.97 | 85.89 | 23.05 | 33.84 | 163.44 | 73.41 | 31.21 |
AAL20200 (yaoF) | 216.88 | 248.46 | 1188.73 | 100.76 | 336.34 | 61.26 | 93.09 | 241.66 | 153.06 | 155.39 | 211.92 | 92.01 | 526.39 | 167.56 | 133.2 | 171.58 | 53.63 | 127.58 | 120.35 | 120.51 | 1245.47 | 354.13 | 24.4 | 120.01 | 895.84 | 176.14 | 119.36 | 297.55 | 144.49 | 16.51 | 476.91 | 398.42 | 114.21 | 42.24 | 54.3 | 142.26 | 154.05 | 348.6 | 359.33 |
AAL20349 (cfa) | 56.08 | 150.62 | 148.96 | 84.97 | 40.32 | 185.04 | 771.95 | 170.81 | 41.25 | 88.05 | 43.43 | 121.04 | 190.07 | 97.44 | 96.47 | 284.69 | 36.59 | 164.2 | 156.19 | 176.13 | 168.48 | 61.14 | 77.62 | 123.38 | 154.96 | 78.4 | 64.12 | 181.34 | 97.6 | 22.83 | 212.87 | 40.95 | 85.49 | 276.29 | 58.34 | 88.58 | 124.4 | 50.66 | 76.28 |
AAL20369 (ydhA) | 42.29 | 63.98 | 68.01 | 57.45 | 54.25 | 17.97 | 197.94 | 110.89 | 24.91 | 51.78 | 31.83 | 23.92 | 49.4 | 50.94 | 80.39 | 115.33 | 94.45 | 72.05 | 74.46 | 78.39 | 27.7 | 54.81 | 323.74 | 97.07 | 34.55 | 47.32 | 71.45 | 90.33 | 42.05 | 59.85 | 38.1 | 49.55 | 49.84 | 145.29 | 84.05 | 47.48 | 176.5 | 49.39 | 81.23 |
AAL20428 (ydfZ) | 626.18 | 677.53 | 863.74 | 264.37 | 55.69 | 59.17 | 1154.85 | 333.05 | 479.15 | 2120.16 | 847.29 | 3839.09 | 285.94 | 80.82 | 51.69 | 2474.1 | 17.01 | 180.19 | 392.23 | 387.88 | 247.0 | 187.58 | 2853.8 | 520.05 | 259.24 | 95.77 | 664.56 | 185.64 | 343.22 | 165.33 | 1535.92 | 105.73 | 157.95 | 3497.26 | 54.03 | 2309.22 | 439.14 | 118.34 | 162.82 |
AAL20480 (STM1562) | 244.3 | 234.24 | 91.9 | 191.07 | 57.17 | 32.56 | 20018.91 | 1008.18 | 43.38 | 237.49 | 66.34 | 143.96 | 57.42 | 20.7 | 1853.17 | 205.29 | 125.02 | 1405.57 | 1413.46 | 1462.62 | 20.77 | 48.26 | 417.76 | 100.93 | 47.63 | 61.2 | 274.61 | 212.34 | 10.45 | 49.29 | 7410.97 | 85.86 | 9.2 | 377.85 | 69.4 | 41.44 | 205.09 | 69.17 | 36.8 |
AAL20483 (rpsV) | 354.36 | 254.19 | 211.24 | 26.72 | 37.54 | 29.34 | 2044.63 | 56.93 | 4.89 | 1868.27 | 7.94 | 79.26 | 613.92 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 209.07 | 0.0 | 0.0 | 195.77 | 10657.85 | 0.0 | 0.0 | 1657.49 | 0.0 | 4.11 | 14.5 | 91.31 | 0.0 | 0.0 | 0.0 | 0.0 | 46.27 | 58.13 | 166.45 |
AAL20566 (hslJ) | 62.77 | 120.81 | 107.9 | 70.08 | 64.58 | 21.63 | 259.21 | 108.29 | 54.57 | 70.8 | 61.64 | 90.12 | 133.66 | 88.07 | 98.4 | 106.06 | 41.73 | 96.15 | 113.3 | 107.17 | 72.56 | 124.68 | 126.88 | 96.5 | 66.41 | 63.87 | 81.6 | 169.54 | 100.13 | 10.74 | 57.26 | 65.02 | 118.24 | 108.91 | 94.88 | 54.17 | 163.98 | 53.65 | 103.43 |
AAL20601 (ycjF) | 14.85 | 42.88 | 46.34 | 21.07 | 33.89 | 14.24 | 11.37 | 27.81 | 25.9 | 31.7 | 27.21 | 21.32 | 33.09 | 38.04 | 35.85 | 15.47 | 19.96 | 40.78 | 51.18 | 46.68 | 46.73 | 41.02 | 14.65 | 30.52 | 30.31 | 41.9 | 20.41 | 58.05 | 27.67 | 4.49 | 17.48 | 32.71 | 27.48 | 12.32 | 37.69 | 13.64 | 55.07 | 42.67 | 77.9 |
AAL20602 (ycjX) | 10.56 | 33.6 | 24.73 | 19.19 | 33.07 | 8.43 | 11.06 | 22.03 | 25.96 | 34.5 | 33.04 | 18.32 | 30.69 | 28.14 | 30.09 | 13.01 | 11.62 | 31.87 | 38.79 | 36.87 | 11.29 | 20.73 | 26.76 | 26.3 | 16.9 | 41.42 | 16.56 | 64.98 | 24.84 | 6.45 | 25.59 | 36.86 | 27.56 | 16.71 | 18.17 | 10.09 | 41.37 | 27.18 | 97.46 |
AAL20623 (osmB) | 784.36 | 636.28 | 1854.96 | 359.24 | 650.4 | 169.46 | 757.19 | 246.55 | 172.62 | 240.54 | 311.13 | 106.51 | 2213.96 | 24.58 | 84.92 | 532.45 | 157.57 | 269.94 | 260.77 | 255.01 | 3536.23 | 139.36 | 162.58 | 993.66 | 3142.99 | 737.92 | 2007.86 | 1803.48 | 741.15 | 170.0 | 173.89 | 426.45 | 764.34 | 347.61 | 95.87 | 584.26 | 3410.04 | 720.74 | 440.22 |
AAL20670 (galU) | 224.43 | 256.89 | 274.02 | 276.85 | 303.44 | 185.12 | 236.28 | 211.68 | 221.11 | 241.7 | 178.66 | 250.66 | 245.58 | 213.33 | 271.71 | 170.04 | 193.96 | 110.87 | 179.53 | 110.44 | 107.79 | 124.15 | 187.59 | 410.9 | 118.14 | 325.29 | 532.59 | 305.11 | 428.5 | 69.27 | 147.49 | 246.08 | 455.64 | 149.93 | 171.22 | 516.23 | 484.53 | 254.12 | 319.47 |
AAL20725 (STM1810) | 59.43 | 35.48 | 220.93 | 4.72 | 42.02 | 2.64 | 10.36 | 15.93 | 2.12 | 6.21 | 2.02 | 0.0 | 499.65 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 87.16 | 0.0 | 0.0 | 73.36 | 1754.91 | 0.0 | 3.35 | 173.99 | 0.0 | 4.42 | 0.0 | 71.27 | 0.0 | 0.0 | 0.0 | 0.0 | 29.84 | 57.69 | 113.05 |
AAL20755 (yobG) | 1540.48 | 88.15 | 4138.23 | 145.9 | 1259.68 | 140.94 | 14.21 | 10.69 | 151.53 | 57.5 | 189.54 | 79.59 | 2170.55 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 18734.6 | 0.0 | 0.0 | 234.34 | 4900.65 | 0.0 | 135.71 | 1519.96 | 0.0 | 364.63 | 413.54 | 1966.9 | 0.0 | 0.0 | 0.0 | 125.65 | 356.74 | 968.58 | 1975.53 |
AAL20780 (STM1865) | 26.83 | 0.0 | 44.28 | 1.23 | 4.99 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 41.43 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1031.21 | 0.0 | 0.0 | 0.0 | 1810.46 | 0.0 | 0.0 | 16.35 | 0.0 | 0.0 | 0.0 | 5.56 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 16.6 | 12.42 |
AAL21065 (STM2161) | 1.87 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.42 | 0.0 | 0.0 | 2.2 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
AAL21106 (yeiH) | 127.85 | 38.44 | 31.72 | 48.29 | 18.25 | 9.77 | 20.31 | 34.37 | 34.96 | 231.37 | 37.88 | 29.85 | 32.35 | 32.47 | 32.64 | 160.27 | 19.86 | 38.48 | 37.71 | 42.06 | 15.99 | 20.61 | 7.69 | 24.51 | 14.81 | 18.99 | 20.29 | 65.65 | 37.16 | 6.13 | 450.35 | 25.0 | 41.02 | 19.98 | 13.32 | 14.63 | 37.22 | 14.29 | 31.9 |
AAL21164 (eco) | 159.4 | 115.03 | 237.67 | 152.93 | 219.97 | 32.02 | 138.31 | 119.97 | 148.17 | 175.91 | 217.02 | 77.45 | 203.0 | 49.2 | 234.16 | 47.81 | 46.31 | 231.12 | 228.15 | 258.68 | 12.51 | 61.93 | 121.12 | 181.43 | 27.76 | 86.62 | 170.35 | 273.08 | 96.07 | 21.8 | 172.14 | 186.43 | 82.05 | 62.79 | 61.75 | 202.03 | 190.43 | 231.81 | 213.17 |
AAL21290 (yfcY) | 7.18 | 23.45 | 37.73 | 10.5 | 18.06 | 2.37 | 1.99 | 12.37 | 9.26 | 15.01 | 8.37 | 2.41 | 28.31 | 10.06 | 10.03 | 7.72 | 35.47 | 25.25 | 19.93 | 28.97 | 2.96 | 6.01 | 2.65 | 29.37 | 7.72 | 13.74 | 5.74 | 14.26 | 6.24 | 0.48 | 9.2 | 14.76 | 7.52 | 8.2 | 53.74 | 3.62 | 48.3 | 37.5 | 9.71 |
AAL21307 (ypeC) | 66.54 | 203.45 | 192.95 | 46.77 | 62.99 | 35.8 | 203.54 | 124.17 | 55.86 | 96.32 | 76.48 | 19.58 | 184.92 | 95.98 | 41.67 | 84.35 | 254.08 | 103.98 | 142.22 | 114.42 | 124.6 | 252.83 | 94.52 | 128.3 | 156.93 | 118.84 | 145.96 | 155.69 | 49.44 | 10.82 | 87.51 | 101.06 | 59.34 | 105.93 | 152.87 | 65.12 | 252.58 | 96.38 | 187.45 |
AAL21442 (asrA) | 44.16 | 20.18 | 6.46 | 26.51 | 6.01 | 0.76 | 6.92 | 34.13 | 4.67 | 273.38 | 5.51 | 6.06 | 8.26 | 2.29 | 60.73 | 28.66 | 4.0 | 121.0 | 92.31 | 137.81 | 1.61 | 2.71 | 6.33 | 34.47 | 3.75 | 2.42 | 12.06 | 47.93 | 5.43 | 0.32 | 244.32 | 6.08 | 5.56 | 13.56 | 3.1 | 2.08 | 60.34 | 3.08 | 23.44 |
AAL21443 (asrB) | 41.0 | 20.74 | 7.52 | 16.02 | 5.45 | 1.34 | 2.68 | 24.08 | 7.23 | 329.76 | 8.36 | 6.97 | 7.36 | 8.7 | 17.72 | 21.07 | 1.82 | 48.05 | 40.0 | 47.08 | 2.62 | 7.13 | 4.97 | 23.72 | 4.08 | 4.8 | 13.47 | 44.53 | 6.67 | 0.36 | 260.04 | 7.19 | 7.19 | 8.34 | 3.24 | 2.7 | 52.1 | 2.98 | 24.37 |
AAL21444 (asrC) | 50.61 | 25.01 | 19.97 | 21.25 | 8.87 | 3.9 | 8.87 | 37.44 | 15.54 | 437.75 | 18.63 | 10.31 | 13.11 | 26.62 | 35.48 | 20.45 | 14.34 | 54.86 | 48.61 | 60.86 | 6.68 | 12.14 | 6.19 | 37.19 | 7.54 | 7.63 | 17.56 | 53.8 | 9.53 | 1.64 | 264.22 | 9.99 | 9.71 | 9.46 | 22.53 | 7.94 | 79.33 | 8.93 | 24.65 |
AAL21686 (ygaC) | 73.72 | 108.26 | 112.81 | 42.24 | 75.63 | 6.27 | 477.18 | 104.19 | 82.63 | 70.48 | 155.34 | 48.71 | 241.38 | 39.05 | 70.97 | 118.05 | 78.8 | 117.63 | 111.91 | 145.25 | 19.64 | 88.05 | 286.28 | 210.61 | 30.63 | 90.23 | 83.86 | 132.08 | 84.85 | 15.83 | 42.73 | 142.58 | 92.99 | 231.59 | 128.23 | 75.3 | 288.06 | 52.33 | 102.9 |
AAL21883 (ygdR) | 398.56 | 326.45 | 1536.78 | 307.5 | 862.11 | 66.01 | 653.09 | 396.9 | 633.64 | 346.14 | 600.2 | 95.46 | 1587.75 | 223.04 | 285.53 | 1552.09 | 339.03 | 277.4 | 338.03 | 331.61 | 281.21 | 43.97 | 2062.8 | 506.7 | 433.62 | 299.22 | 260.68 | 963.69 | 241.13 | 259.67 | 484.05 | 804.31 | 249.03 | 2215.32 | 482.33 | 220.59 | 891.33 | 714.08 | 1277.12 |
AAL21940 (yggE) | 68.06 | 103.72 | 88.44 | 75.35 | 52.41 | 66.52 | 126.2 | 110.57 | 60.32 | 46.07 | 75.23 | 58.78 | 99.16 | 105.2 | 70.29 | 39.22 | 70.06 | 65.22 | 62.99 | 61.27 | 100.14 | 70.56 | 37.72 | 160.35 | 120.16 | 146.98 | 175.74 | 161.61 | 118.01 | 18.43 | 72.84 | 45.02 | 154.93 | 22.42 | 90.08 | 102.33 | 250.41 | 52.14 | 70.99 |
AAL21952 (yggG) | 52.07 | 73.77 | 76.59 | 50.06 | 56.49 | 19.89 | 103.91 | 86.49 | 65.86 | 52.71 | 87.37 | 31.78 | 92.96 | 50.66 | 67.76 | 36.08 | 80.41 | 45.4 | 46.68 | 53.82 | 91.52 | 73.15 | 39.12 | 89.86 | 79.17 | 66.57 | 84.52 | 82.64 | 69.11 | 14.62 | 38.71 | 66.14 | 77.96 | 33.93 | 80.87 | 48.65 | 114.06 | 58.68 | 83.95 |
AAL21988 (nupG) | 13.62 | 94.45 | 37.01 | 36.45 | 30.6 | 4.56 | 17.46 | 52.57 | 199.03 | 27.24 | 164.98 | 79.76 | 21.57 | 30.42 | 312.87 | 26.23 | 299.59 | 8.67 | 7.02 | 9.96 | 1.75 | 34.57 | 53.35 | 77.97 | 4.23 | 12.81 | 21.4 | 13.1 | 8.33 | 2.29 | 29.89 | 109.71 | 8.35 | 31.55 | 204.79 | 28.91 | 121.81 | 35.13 | 52.26 |
AAL22008 (STM3134) | 17.34 | 49.4 | 39.84 | 66.31 | 58.65 | 11.1 | 3.79 | 33.11 | 91.75 | 49.62 | 85.31 | 10.67 | 24.39 | 3.87 | 306.37 | 22.56 | 174.61 | 27.8 | 21.34 | 29.84 | 3.72 | 15.76 | 17.16 | 72.35 | 6.23 | 9.95 | 7.85 | 47.82 | 6.07 | 2.06 | 18.56 | 105.54 | 3.11 | 17.49 | 154.12 | 7.66 | 127.87 | 28.3 | 112.8 |
AAL22009 (STM3135) | 34.14 | 76.34 | 55.88 | 133.79 | 70.03 | 23.65 | 12.32 | 76.61 | 160.47 | 93.25 | 145.8 | 57.78 | 34.6 | 13.97 | 780.01 | 35.45 | 254.86 | 41.8 | 31.68 | 43.47 | 7.67 | 31.99 | 22.41 | 48.94 | 9.93 | 40.24 | 10.55 | 87.65 | 20.25 | 7.45 | 27.22 | 105.71 | 8.62 | 18.41 | 481.22 | 16.66 | 88.47 | 30.87 | 146.33 |
AAL22010 (STM3136) | 13.35 | 39.56 | 30.23 | 51.88 | 27.93 | 13.12 | 4.96 | 27.79 | 66.35 | 46.32 | 56.01 | 28.3 | 24.41 | 11.62 | 202.9 | 10.96 | 30.87 | 14.0 | 13.59 | 15.03 | 4.09 | 11.43 | 7.06 | 39.16 | 5.79 | 19.18 | 6.4 | 45.69 | 14.93 | 2.01 | 15.96 | 49.83 | 8.21 | 3.54 | 64.52 | 7.54 | 66.74 | 16.03 | 92.07 |
AAL22011 (STM3137) | 24.29 | 44.4 | 89.13 | 66.28 | 30.96 | 27.88 | 11.92 | 41.02 | 81.5 | 68.52 | 87.69 | 32.84 | 58.47 | 29.54 | 253.42 | 25.18 | 30.17 | 16.99 | 18.06 | 21.97 | 11.74 | 19.51 | 17.48 | 33.07 | 10.68 | 27.44 | 9.19 | 63.15 | 21.65 | 10.6 | 31.46 | 53.59 | 13.12 | 19.3 | 74.21 | 11.81 | 69.7 | 30.9 | 96.27 |
AAL22069 (ribB) | 252.05 | 194.63 | 68.57 | 107.12 | 96.95 | 37.02 | 217.95 | 227.26 | 132.37 | 131.77 | 94.25 | 86.74 | 179.44 | 320.19 | 128.05 | 148.43 | 224.75 | 144.03 | 247.65 | 229.44 | 42.69 | 144.14 | 128.25 | 238.26 | 47.27 | 145.01 | 170.73 | 132.44 | 137.05 | 13.26 | 96.96 | 164.65 | 150.97 | 187.94 | 1029.48 | 99.39 | 492.71 | 111.36 | 328.66 |
AAL22088 (yqjI) | 69.29 | 105.78 | 80.09 | 81.24 | 48.35 | 20.89 | 99.79 | 143.51 | 68.55 | 70.02 | 196.0 | 103.42 | 40.59 | 110.74 | 330.51 | 25.63 | 103.23 | 116.16 | 98.15 | 119.82 | 28.7 | 55.73 | 18.17 | 65.84 | 24.72 | 37.89 | 60.26 | 72.43 | 59.02 | 9.29 | 36.08 | 70.95 | 73.05 | 20.66 | 125.58 | 126.64 | 75.48 | 71.04 | 65.55 |
AAL22092 (fadH) | 18.49 | 23.86 | 49.14 | 9.01 | 18.75 | 2.74 | 2.02 | 12.47 | 14.26 | 15.01 | 18.59 | 2.59 | 38.92 | 11.8 | 8.21 | 6.75 | 17.61 | 12.82 | 11.18 | 14.0 | 15.82 | 8.13 | 2.5 | 21.09 | 13.18 | 13.09 | 9.46 | 20.65 | 5.69 | 1.6 | 10.87 | 23.59 | 5.35 | 5.95 | 23.78 | 8.02 | 34.75 | 23.07 | 21.72 |
AAL22110 (yhaL) | 1258.37 | 56.9 | 330.02 | 123.85 | 346.86 | 218.4 | 2.83 | 10.16 | 494.91 | 208.12 | 417.11 | 49.21 | 319.64 | 1.86 | 0.0 | 8.57 | 1.11 | 0.0 | 0.0 | 0.0 | 943.96 | 15.83 | 2.55 | 114.46 | 372.32 | 11.9 | 105.65 | 441.3 | 24.85 | 150.6 | 404.45 | 347.93 | 22.47 | 0.79 | 1.67 | 203.84 | 202.62 | 273.34 | 329.93 |
AAL22111 (yhaN) | 20.67 | 33.56 | 17.99 | 35.2 | 37.23 | 9.12 | 11.68 | 28.37 | 67.37 | 21.92 | 56.46 | 14.42 | 32.78 | 22.58 | 18.57 | 27.23 | 13.37 | 39.7 | 42.78 | 48.43 | 23.76 | 27.17 | 15.13 | 38.39 | 14.12 | 13.85 | 14.32 | 36.75 | 12.81 | 2.85 | 20.76 | 24.89 | 11.12 | 37.04 | 7.57 | 12.21 | 58.66 | 11.86 | 40.6 |
AAL22112 (yhaO) | 10.26 | 16.41 | 49.48 | 11.69 | 70.89 | 1.93 | 6.09 | 18.51 | 42.09 | 9.31 | 37.34 | 1.28 | 161.44 | 5.39 | 9.31 | 55.77 | 9.73 | 22.26 | 22.96 | 29.89 | 2.9 | 5.94 | 36.44 | 68.65 | 4.12 | 3.13 | 4.81 | 25.69 | 2.72 | 1.46 | 9.35 | 39.06 | 3.07 | 126.78 | 4.54 | 3.57 | 121.21 | 60.98 | 46.13 |
AAL22175 (nlp) | 141.66 | 73.38 | 43.05 | 36.14 | 41.61 | 22.19 | 190.6 | 72.76 | 74.95 | 24.88 | 124.52 | 45.75 | 39.4 | 120.14 | 75.27 | 28.19 | 133.89 | 23.34 | 37.29 | 37.85 | 9.77 | 73.7 | 30.83 | 175.4 | 23.49 | 52.18 | 142.8 | 43.8 | 36.31 | 27.72 | 7.27 | 36.1 | 42.98 | 36.58 | 399.13 | 84.61 | 315.84 | 39.34 | 45.74 |
AAL22179 (yrbC) | 105.19 | 144.17 | 221.59 | 143.5 | 135.44 | 170.23 | 173.32 | 187.64 | 144.71 | 166.42 | 151.12 | 142.22 | 211.38 | 234.05 | 152.17 | 67.87 | 111.31 | 88.52 | 105.07 | 97.19 | 96.34 | 106.18 | 51.61 | 129.2 | 132.99 | 275.34 | 168.82 | 180.57 | 177.26 | 47.53 | 102.72 | 142.69 | 188.97 | 44.28 | 106.55 | 122.45 | 215.38 | 176.73 | 152.91 |
AAL22246 (STM3377) | 34.31 | 49.2 | 46.58 | 21.03 | 16.93 | 19.28 | 38.21 | 34.66 | 17.02 | 21.09 | 25.68 | 15.67 | 29.69 | 51.38 | 36.28 | 20.48 | 34.9 | 26.27 | 26.06 | 30.3 | 23.45 | 57.64 | 25.54 | 59.78 | 24.42 | 45.48 | 26.6 | 91.25 | 21.93 | 4.31 | 11.56 | 24.86 | 19.61 | 23.76 | 35.87 | 33.28 | 85.45 | 20.32 | 41.79 |
AAL22247 (STM3378) | 35.1 | 46.77 | 85.41 | 25.09 | 35.14 | 20.82 | 73.34 | 53.35 | 32.68 | 32.39 | 47.75 | 15.66 | 69.6 | 76.06 | 48.07 | 54.41 | 28.1 | 43.13 | 36.01 | 46.65 | 26.58 | 38.69 | 65.77 | 89.77 | 24.44 | 42.82 | 23.33 | 121.78 | 26.84 | 14.75 | 24.07 | 49.25 | 20.96 | 67.07 | 33.94 | 26.26 | 132.87 | 41.83 | 66.6 |
AAL22261 (yhdV) | 99.39 | 96.17 | 53.32 | 49.35 | 43.5 | 9.42 | 586.28 | 85.0 | 65.74 | 58.01 | 93.7 | 130.49 | 52.25 | 51.5 | 176.94 | 197.15 | 200.54 | 63.96 | 80.93 | 80.14 | 50.17 | 28.39 | 285.0 | 267.61 | 142.47 | 40.22 | 71.97 | 211.25 | 41.75 | 155.75 | 36.74 | 42.83 | 40.06 | 186.61 | 205.26 | 57.08 | 462.84 | 35.26 | 52.4 |
AAL22440 (STM3580) | 200.39 | 309.98 | 367.9 | 238.3 | 324.13 | 379.18 | 236.62 | 295.2 | 216.5 | 237.27 | 249.41 | 324.22 | 291.52 | 239.7 | 274.17 | 150.27 | 151.91 | 126.78 | 167.53 | 156.4 | 255.08 | 436.27 | 128.57 | 246.18 | 252.44 | 302.47 | 374.27 | 336.03 | 307.42 | 69.59 | 168.54 | 434.14 | 334.79 | 76.45 | 98.51 | 304.9 | 322.42 | 242.13 | 456.77 |
AAL22618 (STM3760) | 1.45 | 0.0 | 0.0 | 0.46 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 5.72 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 7.9 | 0.0 | 0.0 | 0.0 | 18.49 | 0.0 | 0.0 | 3.19 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
AAL23046 (yjbE) | 245.11 | 55.13 | 168.96 | 102.33 | 81.41 | 180.19 | 100.8 | 113.66 | 43.12 | 123.61 | 54.12 | 38.64 | 89.66 | 92.81 | 22.07 | 21.33 | 24.2 | 30.76 | 21.2 | 23.01 | 1179.77 | 73.05 | 6.39 | 94.75 | 1065.0 | 255.6 | 1033.65 | 82.0 | 285.36 | 299.32 | 67.17 | 85.87 | 171.6 | 7.12 | 13.63 | 128.68 | 505.95 | 78.61 | 69.82 |
AAL23068 (yjbO) | 52.05 | 71.68 | 64.87 | 15.96 | 23.76 | 7.13 | 25.37 | 36.9 | 66.64 | 27.27 | 127.58 | 26.44 | 99.65 | 23.19 | 4.04 | 18.75 | 6.31 | 15.36 | 14.6 | 23.15 | 23.64 | 61.63 | 10.72 | 136.84 | 46.03 | 36.64 | 58.97 | 66.73 | 23.53 | 18.13 | 50.02 | 44.18 | 21.27 | 29.69 | 11.28 | 37.45 | 290.78 | 28.17 | 73.17 |
AAL23120 (adi) | 15.61 | 23.87 | 8.91 | 6.43 | 6.25 | 2.09 | 309.94 | 16.78 | 10.4 | 9.44 | 20.14 | 7.23 | 15.39 | 13.6 | 33.5 | 6.99 | 8.08 | 15.23 | 14.21 | 18.9 | 4.6 | 8.62 | 4.87 | 37.8 | 5.15 | 4.96 | 11.84 | 9.16 | 4.92 | 3.09 | 66.39 | 10.55 | 5.53 | 6.67 | 11.72 | 10.44 | 99.26 | 5.68 | 19.33 |
AAL23225 (ytfJ) | 22.66 | 69.66 | 153.82 | 38.69 | 72.98 | 14.05 | 24.86 | 40.29 | 25.78 | 67.5 | 35.64 | 6.73 | 114.64 | 22.18 | 30.01 | 50.27 | 51.4 | 36.44 | 43.24 | 51.76 | 26.95 | 99.12 | 55.08 | 58.15 | 56.68 | 40.29 | 9.24 | 47.89 | 14.38 | 7.93 | 39.07 | 82.24 | 13.47 | 53.82 | 85.48 | 9.91 | 121.0 | 99.65 | 68.35 |
AAL23325 (uxuR) | 136.69 | 116.17 | 98.55 | 74.5 | 66.48 | 18.15 | 69.88 | 108.62 | 106.18 | 98.47 | 114.3 | 60.13 | 85.33 | 57.25 | 197.63 | 42.89 | 150.1 | 115.79 | 102.24 | 141.64 | 43.71 | 108.24 | 29.84 | 92.26 | 90.89 | 83.37 | 63.25 | 91.78 | 64.3 | 8.94 | 63.91 | 72.99 | 50.59 | 33.93 | 158.4 | 89.54 | 152.58 | 76.64 | 78.64 |
AAL23377 (STM4562) | 412.33 | 1747.59 | 1787.55 | 104.01 | 210.16 | 57.33 | 377.64 | 83.86 | 81.0 | 147.49 | 46.83 | 25.22 | 1186.71 | 22.77 | 0.0 | 1986.46 | 18.96 | 0.0 | 0.0 | 0.0 | 6049.61 | 879.82 | 39.49 | 183.16 | 13170.59 | 247.85 | 397.82 | 4392.32 | 299.81 | 112.33 | 436.68 | 218.38 | 126.24 | 1124.15 | 62.49 | 211.78 | 427.81 | 395.17 | 226.97 |
AAL23522 (pefA) | 17.08 | 36.28 | 126.45 | 36.65 | 61.19 | 22.73 | 6.87 | 47.93 | 20.91 | 213.6 | 31.13 | 104.44 | 25.8 | 87.65 | 17.65 | 1.74 | 20.42 | 65.87 | 42.19 | 59.23 | 6.26 | 7.77 | 0.33 | 0.1 | 22.63 | 34.63 | 0.0 | 28.22 | 37.43 | 4.25 | 40.02 | 60.8 | 22.18 | 1.16 | 7.12 | 0.0 | 0.08 | 58.09 | 35.19 |
AAM89474 (ysdA) | 37.15 | 14.82 | 12.6 | 0.0 | 14.07 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 8.58 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 375.57 | 0.0 | 0.0 | 265.21 | 0.0 | 0.0 | 0.0 | 6.21 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 3.17 | 4.61 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)