Aliases : yphD, b2546
Description : putative sugar ABC transporter permease [Ensembl]. Branched-chain amino acid transport system / permease component [Interproscan].
Gene families : OG_02_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAC75599 | |
Cluster | HCCA: Cluster_10 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC76773 | rbsC, b3750 | D-ribose ABC transporter permease [Ensembl].... | 0.03 | OrthoFinder | |
AGT22039 | N559_0217 | D-xylose transport permease ABC transporter membrane... | 0.05 | OrthoFinder | |
AGT26147 | N559_4544 | ribose high-affinity ABC transporter permease component... | 0.05 | OrthoFinder | |
AGT26396 | N559_4806 | putative carbohydrate ABC transport system permease [Ensembl]. | 0.04 | OrthoFinder | |
AGT26648 | N559_5071 | putative inner-membrane translocator [Ensembl]. | 0.04 | OrthoFinder | |
AGT26649 | N559_5072 | rhamnose ABC transport system permease component [Ensembl]. | 0.03 | OrthoFinder | |
EDJ91405 | CGSHi22421_04858 | beta-methylgalactoside transporter inner membrane... | 0.03 | OrthoFinder | |
EDJ91906 | CGSHi22421_09123 | D-xylose ABC transporter permease protein [Ensembl].... | 0.03 | OrthoFinder | |
EDJ91907 | CGSHi22421_09128 | D-xylose ABC transporter permease protein [Ensembl].... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
MF | GO:0022857 | transmembrane transporter activity | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Enrichment |
MF | GO:0005275 | amine transmembrane transporter activity | IEP | Enrichment |
BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
MF | GO:0008740 | L-rhamnose isomerase activity | IEP | Enrichment |
MF | GO:0008887 | glycerate kinase activity | IEP | Enrichment |
MF | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | IEP | Enrichment |
BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEP | Enrichment |
MF | GO:0015101 | organic cation transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015665 | alcohol transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015695 | organic cation transport | IEP | Enrichment |
BP | GO:0015837 | amine transport | IEP | Enrichment |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
MF | GO:0019203 | carbohydrate phosphatase activity | IEP | Enrichment |
BP | GO:0019299 | rhamnose metabolic process | IEP | Enrichment |
BP | GO:0019318 | hexose metabolic process | IEP | Enrichment |
BP | GO:0019700 | organic phosphonate catabolic process | IEP | Enrichment |
BP | GO:0031388 | organic acid phosphorylation | IEP | Enrichment |
MF | GO:0034228 | ethanolamine transmembrane transporter activity | IEP | Enrichment |
BP | GO:0034229 | ethanolamine transport | IEP | Enrichment |
MF | GO:0042132 | fructose 1,6-bisphosphate 1-phosphatase activity | IEP | Enrichment |
MF | GO:0050308 | sugar-phosphatase activity | IEP | Enrichment |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
MF | GO:0071949 | FAD binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001851 | ABC_transp_permease | 54 | 317 |
UniProtKB | P77315 |