AAC76609 (yiaU, b3585)

Aliases : yiaU, b3585

Description : putative DNA-binding transcriptional regulator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAC76609
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AAL21469	STM2575	putative LysR family transcriptional regulator...	0.04	OrthoFinder
AAL21995	STM3121	putative LysR family transcriptional regulator...	0.02	OrthoFinder
AGT23181	N559_1423	LysR family transcriptional regulator [Ensembl]. LysR...	0.05	OrthoFinder
AGT23255	N559_1502	putative LysR-family transcriptional regulator...	0.06	OrthoFinder
AGT23273	N559_1520, CynR	DNA-binding transcriptional regulator CynR [Ensembl]....	0.06	OrthoFinder
AGT23447	N559_1705	LysR family transcriptional regulator [Ensembl]. LysR...	0.08	OrthoFinder
AGT24425	N559_2752	LysR family transcriptional regulator [Ensembl]. LysR...	0.03	OrthoFinder
AGT24793	N559_3132	LysR family transcriptional regulator [Ensembl]. LysR...	0.06	OrthoFinder
CCL17254	BN171_1410016	Transcriptional regulator, LysR family [Ensembl]. LysR...	0.04	OrthoFinder
CCL20714	BN171_960006	LysR family transcriptional regulator [Ensembl]. LysR...	0.03	OrthoFinder
CRO11818	benM_2	Ben and cat operon transcriptional regulator [Ensembl]....	0.03	OrthoFinder
CRO72193	hcaR_3	Hca operon transcriptional activator [Ensembl]. LysR...	0.03	OrthoFinder
CRP45508	benM_8	Ben and cat operon transcriptional regulator [Ensembl]....	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005244	voltage-gated ion channel activity	IEP	Enrichment
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Enrichment
MF	GO:0005254	chloride channel activity	IEP	Enrichment
CC	GO:0005886	plasma membrane	IEP	Enrichment
BP	GO:0006274	DNA replication termination	IEP	Enrichment
BP	GO:0006820	anion transport	IEP	Enrichment
BP	GO:0006821	chloride transport	IEP	Enrichment
MF	GO:0008308	voltage-gated anion channel activity	IEP	Enrichment
MF	GO:0008509	anion transmembrane transporter activity	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0022832	voltage-gated channel activity	IEP	Enrichment
MF	GO:0022836	gated channel activity	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005119	LysR_subst-bd	95	303
IPR000847	Tscrpt_reg_HTH_LysR	9	66

External Links

UniProtKB	P37682

AAC76609 (yiaU, b3585)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation