AAC77032 (soxS, b4062)

Aliases : soxS, b4062

Description : superoxide response regulon transcriptional activator; autoregulator [Ensembl]. Helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAC77032
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AAL20438 STM1519, marA AraC/XylS family transcriptional activator of defense... 0.07 OrthoFinder
AAL23089 STM4265, soxS transcriptional activator of superoxide response regulon... 0.05 OrthoFinder
AGT26420 N559_4834, SoxS DNA-binding transcriptional regulator SoxS [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
InterPro domains Description Start Stop
IPR018060 HTH_AraC 27 106
UniProtKB P0A9E2