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AAC77304 (hsdS, b4348)


Aliases : hsdS, b4348

Description : specificity determinant for hsdM and hsdR [Ensembl]. Type I restriction modification DNA specificity domain [Interproscan].


Gene families : OG_02_0000928 (OrthoFinder) Phylogenetic Tree(s): OG0000928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC77304
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AAK99252 spr0448, hsdS Type I site-specific deoxyribonuclease chain S... 0.02 OrthoFinder
AAL23342 STM4524, hsdS specificity determinant for hsdM and hsdR [Ensembl].... 0.08 OrthoFinder
AHY40725 CJ8421_07755 Type I restriction-modification system, specificity... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006304 DNA modification IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0006955 immune response IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008378 galactosyltransferase activity IEP Enrichment
BP GO:0008653 lipopolysaccharide metabolic process IEP Enrichment
MF GO:0008767 UDP-galactopyranose mutase activity IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
MF GO:0008918 lipopolysaccharide 3-alpha-galactosyltransferase activity IEP Enrichment
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Enrichment
BP GO:0009307 DNA restriction-modification system IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0035250 UDP-galactosyltransferase activity IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044355 clearance of foreign intracellular DNA IEP Enrichment
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0098542 defense response to other organism IEP Enrichment
BP GO:0099046 clearance of foreign intracellular nucleic acids IEP Enrichment
InterPro domains Description Start Stop
IPR000055 Restrct_endonuc_typeI_TRD 7 190
IPR000055 Restrct_endonuc_typeI_TRD 348 403
UniProtKB P05719