- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : prfA, CGSHi22421_03458
Description : peptide chain release factor 1 [Ensembl]. Elongation factor P hydroxylase [Interproscan].
Gene families : OG_02_0002346 (OrthoFinder) Phylogenetic Tree(s): OG0002346_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EDJ90145 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL21282 | STM2381, yfcM | putative cytoplasmic protein [Ensembl]. Elongation... | 0.05 | OrthoFinder | |
| AGT23287 | N559_1535 | putative transporting ATPase [Ensembl]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | Enrichment |
| MF | GO:0003911 | DNA ligase (NAD+) activity | IEP | Enrichment |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | Enrichment |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Enrichment |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| MF | GO:0032977 | membrane insertase activity | IEP | Enrichment |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | Enrichment |
| MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | Enrichment |
| BP | GO:0055085 | transmembrane transport | IEP | Enrichment |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:0140104 | molecular carrier activity | IEP | Enrichment |
| MF | GO:0140597 | protein carrier activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007411 | EpmC | 11 | 173 |
| No external refs found! |