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Aliases : CGSHi22421_06494
Description : shikimate 5-dehydrogenase [Ensembl]. Shikimate dehydrogenase substrate binding domain [Interproscan].
Gene families : OG_02_0000118 (OrthoFinder) Phylogenetic Tree(s): OG0000118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EDJ90268 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL22264 | STM3401, aroE | dehydroshikimate reductase [Ensembl]. Shikimate /... | 0.04 | OrthoFinder | |
| AKP14671 | aroE, WX61_00592 | Shikimate dehydrogenase [Ensembl]. Shikimate / quinate... | 0.04 | OrthoFinder | |
| CCG27468 | No alias | Shikimate/quinate 5-dehydrogenase I beta [Ensembl].... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEA | Interproscan |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | Enrichment |
| MF | GO:0003951 | NAD+ kinase activity | IEP | Enrichment |
| BP | GO:0006298 | mismatch repair | IEP | Enrichment |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Enrichment |
| BP | GO:0006563 | L-serine metabolic process | IEP | Enrichment |
| BP | GO:0006741 | NADP biosynthetic process | IEP | Enrichment |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0008410 | CoA-transferase activity | IEP | Enrichment |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0010033 | response to organic substance | IEP | Enrichment |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | Enrichment |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Enrichment |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | Enrichment |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Enrichment |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Enrichment |
| MF | GO:0030983 | mismatched DNA binding | IEP | Enrichment |
| BP | GO:0042221 | response to chemical | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0061024 | membrane organization | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013708 | Shikimate_DH-bd_N | 23 | 90 |
| No external refs found! |