EDJ90537 (CGSHi22421_03168)

Aliases : CGSHi22421_03168

Description : phosphate regulon transcriptional regulatory protein PhoB [Ensembl]. Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDJ90537
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AAC73502	phoB, b0399	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAC75140	baeR, b2079	response regulator in two-component regulatory system...	0.04	OrthoFinder
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.01	OrthoFinder
AAC76894	cpxR, b3912	response regulator in two-component regulatory system...	0.05	OrthoFinder
AAK98880	spr0076, rr08	Response regulator [Ensembl]. Transcriptional regulatory...	0.03	OrthoFinder
AAL19351	STM0397, phoB	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAL21035	STM2131, baeR	response regulator in two-component regulatory system...	0.04	OrthoFinder
AAL21670	STM2785, tctD	tricarboxylic transport regulatory protein [Ensembl]....	0.03	OrthoFinder
AGT22192	N559_0379	osmolarity response regulator [Ensembl]. Response...	0.03	OrthoFinder
AGT25258	N559_3616, KdpE	KDP operon transcriptional regulatory protein KdpE...	0.03	OrthoFinder
CCL16989	BN171_1060003	Two-component response regulator [Ensembl]. Response...	0.02	OrthoFinder
CCL17733	BN171_1740008	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL17877	BN171_1920004	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL18024	BN171_2030010	Two-component response regulator [Ensembl]. Response...	0.02	OrthoFinder
CCL18738	BN171_260007	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCL20132	BN171_370006	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCP43225	regX3, Rv0491	Two component sensory transduction protein RegX3...	0.02	OrthoFinder
CPC31435	arlR, ERS093114_00002	Putative response regulator ArlR [Ensembl]....	0.02	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.01	OrthoFinder
CPD21777	hssR, ERS093114_02323	two-component response regulator [Ensembl]....	0.04	OrthoFinder
CRO26633	phoB	Phosphate regulon transcriptional regulatory protein...	0.03	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.01	OrthoFinder
KNA52268	VCV51_033433	response regulator receiver domain-containing protein...	0.04	OrthoFinder
KNA58243	VCV51_032751	response regulator receiver domain-containing protein...	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004325	ferrochelatase activity	IEP	Enrichment
MF	GO:0004347	glucose-6-phosphate isomerase activity	IEP	Enrichment
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Enrichment
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
MF	GO:0004664	prephenate dehydratase activity	IEP	Enrichment
BP	GO:0006541	glutamine metabolic process	IEP	Enrichment
BP	GO:0006542	glutamine biosynthetic process	IEP	Enrichment
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Enrichment
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Enrichment
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0006783	heme biosynthetic process	IEP	Enrichment
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Enrichment
MF	GO:0008759	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity	IEP	Enrichment
MF	GO:0008852	exodeoxyribonuclease I activity	IEP	Enrichment
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Enrichment
MF	GO:0015501	glutamate:sodium symporter activity	IEP	Enrichment
BP	GO:0015800	acidic amino acid transport	IEP	Enrichment
BP	GO:0015807	L-amino acid transport	IEP	Enrichment
BP	GO:0015813	L-glutamate transmembrane transport	IEP	Enrichment
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Enrichment
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Enrichment
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Enrichment
MF	GO:0019213	deacetylase activity	IEP	Enrichment
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Enrichment
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Enrichment
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Enrichment
BP	GO:0042168	heme metabolic process	IEP	Enrichment
BP	GO:0043165	Gram-negative-bacterium-type cell outer membrane assembly	IEP	Enrichment
BP	GO:0071709	membrane assembly	IEP	Enrichment
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Enrichment
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Enrichment
BP	GO:1902475	L-alpha-amino acid transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001867	OmpR/PhoB-type_DNA-bd	69	144

External Links

No external refs found!

EDJ90537 (CGSHi22421_03168)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation