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  5. EDJ90616

EDJ90616 (CGSHi22421_01387)


Aliases : CGSHi22421_01387

Description : 30S ribosomal protein S16 [Ensembl]. Ribosomal protein S16 [Interproscan].


Gene families : OG_02_0000374 (OrthoFinder) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90616
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC75658 rpsP, b2609 30S ribosomal subunit protein S16 [Ensembl]. Ribosomal... 0.14 OrthoFinder
AAK99486 spr0682, rpsP 30S Ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AAL21565 STM2676, rpsP 30S ribosomal subunit protein S16 [Ensembl]. Ribosomal... 0.14 OrthoFinder
AEA94094 rpsP, OG1RF_11407 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AGT23084 N559_1322 30S ribosomal protein S16 [Ensembl]. 0.03 OrthoFinder
CCP45711 rpsP, Rv2909c 30S ribosomal protein S16 RpsP [Ensembl]. Ribosomal... 0.06 OrthoFinder
CPC35905 rpsP, ERS093114_00186 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
CRO16871 rpsP 30S ribosomal protein S16 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
KNA51822 VCV51_033509 ribosomal protein S16 [Ensembl]. Ribosomal protein S16... 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
BP GO:0009061 anaerobic respiration IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
InterPro domains Description Start Stop
IPR000307 Ribosomal_S16 8 68
No external refs found!