Coexpression cluster: Cluster_17 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043043 peptide biosynthetic process 26.51% (22/83) 3.69 0.0 0.0
GO:0006518 peptide metabolic process 26.51% (22/83) 3.69 0.0 0.0
GO:0043604 amide biosynthetic process 26.51% (22/83) 3.69 0.0 0.0
GO:0003735 structural constituent of ribosome 26.51% (22/83) 3.73 0.0 0.0
GO:0005198 structural molecule activity 26.51% (22/83) 3.73 0.0 0.0
GO:0006412 translation 26.51% (22/83) 3.76 0.0 0.0
GO:0005840 ribosome 25.3% (21/83) 3.73 0.0 0.0
GO:0043603 cellular amide metabolic process 26.51% (22/83) 3.56 0.0 0.0
GO:0044267 cellular protein metabolic process 26.51% (22/83) 3.56 0.0 0.0
GO:0043228 non-membrane-bounded organelle 25.3% (21/83) 3.63 0.0 0.0
GO:0043229 intracellular organelle 25.3% (21/83) 3.63 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 25.3% (21/83) 3.63 0.0 0.0
GO:0043226 organelle 25.3% (21/83) 3.63 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 28.92% (24/83) 3.22 0.0 0.0
GO:0009059 macromolecule biosynthetic process 28.92% (24/83) 3.12 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 28.92% (24/83) 2.8 0.0 0.0
GO:0019538 protein metabolic process 26.51% (22/83) 2.93 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 30.12% (25/83) 2.43 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 26.51% (22/83) 2.5 0.0 0.0
GO:0044249 cellular biosynthetic process 28.92% (24/83) 2.04 0.0 0.0
GO:1901576 organic substance biosynthetic process 28.92% (24/83) 2.01 0.0 0.0
GO:0009058 biosynthetic process 28.92% (24/83) 1.8 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 30.12% (25/83) 1.72 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 31.33% (26/83) 1.56 0.0 1e-06
GO:0043170 macromolecule metabolic process 30.12% (25/83) 1.57 0.0 1e-06
GO:0006807 nitrogen compound metabolic process 34.94% (29/83) 1.29 1e-06 7e-06
GO:0110165 cellular anatomical entity 31.33% (26/83) 1.39 1e-06 8e-06
GO:0005575 cellular_component 31.33% (26/83) 1.29 5e-06 3e-05
GO:0044238 primary metabolic process 33.73% (28/83) 1.16 1.2e-05 6.7e-05
GO:0044237 cellular metabolic process 33.73% (28/83) 1.11 2.4e-05 0.000128
GO:0071704 organic substance metabolic process 33.73% (28/83) 0.93 0.00024 0.001231
GO:0008152 metabolic process 34.94% (29/83) 0.81 0.000825 0.0041
GO:0006351 transcription, DNA-templated 2.41% (2/83) 4.07 0.004521 0.021144
GO:0097659 nucleic acid-templated transcription 2.41% (2/83) 4.07 0.004521 0.021144
GO:0009987 cellular process 34.94% (29/83) 0.65 0.00468 0.021263
GO:0034062 5'-3' RNA polymerase activity 2.41% (2/83) 3.66 0.008811 0.036865
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.41% (2/83) 3.66 0.008811 0.036865
GO:0097747 RNA polymerase activity 2.41% (2/83) 3.66 0.008811 0.036865
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Campylobacter jejuni HCCA Cluster_2 0.051 OrthoFinder Compare
Campylobacter jejuni HCCA Cluster_8 0.107 OrthoFinder Compare
Clostridioides difficile HCCA Cluster_2 0.118 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_7 0.069 OrthoFinder Compare
Enterococcus faecalis HCCA Cluster_18 0.068 OrthoFinder Compare
Escherichia coli HCCA Cluster_1 0.213 OrthoFinder Compare
Escherichia coli HCCA Cluster_31 0.028 OrthoFinder Compare
Escherichia coli HCCA Cluster_42 0.051 OrthoFinder Compare
Helicobacter pylori HCCA Cluster_9 0.128 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_12 0.146 OrthoFinder Compare
Klebsiella pneumoniae HCCA Cluster_34 0.043 OrthoFinder Compare
Listeria monocytogenes HCCA Cluster_2 0.148 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_3 0.029 OrthoFinder Compare
Mycoplasma pneumoniae HCAA Cluster_5 0.144 OrthoFinder Compare
Mycobacterium tuberculosis HCCA Cluster_25 0.084 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_5 0.037 OrthoFinder Compare
Neisseria gonorrhoeae HCCA Cluster_6 0.079 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_16 0.04 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_22 0.099 OrthoFinder Compare
Pseudomonas aeruginosa HCCA Cluster_63 0.033 OrthoFinder Compare
Salmonella enterica HCCA Cluster_23 0.354 OrthoFinder Compare
Staphylococcus aureus HCCA Cluster_24 0.257 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_7 0.158 OrthoFinder Compare
Streptococcus pneumoniae HCCA Cluster_13 0.057 OrthoFinder Compare
Streptococcus pyogenes HCAA Cluster_4 0.083 OrthoFinder Compare
Vibrio cholerae HCCA Cluster_8 0.292 OrthoFinder Compare
Sequences (83) (download table)

InterPro Domains

GO Terms

Family Terms