EDJ90748 (CGSHi22421_00250)

Aliases : CGSHi22421_00250

Description : hypothetical protein [Ensembl]. F pilus assembly Type-IV secretion system for plasmid transfer [Interproscan].

Gene families : OG_02_0002475 (OrthoFinder) Phylogenetic Tree(s): OG0002475_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EDJ90748
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AGT22597 N559_0807 hypothetical protein [Ensembl]. F pilus assembly Type-IV... 0.1 OrthoFinder
CRN66794 No alias conjugal transfer protein TrbE [Ensembl]. F pilus... 0.17 OrthoFinder
CRN76908 No alias type IV secretion system ATPase VirB4 [Ensembl]. F pilus... 0.15 OrthoFinder
CRN93079 No alias type IV secretion system ATPase VirB4 [Ensembl]. F pilus... 0.16 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000150 DNA strand exchange activity IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
CC GO:0009317 acetyl-CoA carboxylase complex IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
InterPro domains Description Start Stop
IPR025955 TraC/Conjuga_ATPase 73 340
No external refs found!