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  5. EDJ91074

EDJ91074 (CGSHi22421_10047)


Aliases : CGSHi22421_10047

Description : tryptophan synthase subunit beta [Ensembl]. Pyridoxal-phosphate dependent enzyme [Interproscan].


Gene families : OG_02_0000713 (OrthoFinder) Phylogenetic Tree(s): OG0000713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91074
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AAC74343 trpB, b1261 tryptophan synthase, beta subunit [Ensembl].... 0.05 OrthoFinder
AAL00435 spr1632, trpB Tryptophan synthase beta chain [Ensembl].... 0.05 OrthoFinder
AAL20644 STM1726, trpB tryptophan synthase, beta protein [Ensembl].... 0.1 OrthoFinder
AGT24682 N559_3019 tryptophan synthase subunit beta [Ensembl]. 0.08 OrthoFinder
AHY39604 CJ8421_01745 tryptophan synthase subunit beta [Ensembl].... 0.06 OrthoFinder
AKI49625 trpB, L2625_01735 tryptophan synthase, beta subunit [Ensembl].... 0.06 OrthoFinder
CCP44376 trpB, Rv1612 Tryptophan synthase, beta subunit TrpB [Ensembl].... 0.04 OrthoFinder
CPC32444 trpB, ERS093114_00044 Tryptophan synthase beta chain [Ensembl].... 0.14 OrthoFinder
CRP69095 trpB Tryptophan synthase beta chain [Ensembl].... 0.03 OrthoFinder
KNA53895 VCV51_030824 tryptophan synthase [Ensembl]. Pyridoxal-phosphate... 0.09 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006004 fucose metabolic process IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006576 cellular biogenic amine metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
MF GO:0008736 L-fucose isomerase activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
CC GO:0019008 molybdopterin synthase complex IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0044106 cellular amine metabolic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001926 PLP-dep 53 365
No external refs found!