EDJ91092 (rpsI, CGSHi22421_10137)

Aliases : rpsI, CGSHi22421_10137

Description : 30S ribosomal protein S9 [Ensembl]. Ribosomal protein S9/S16 [Interproscan].

Gene families : OG_02_0000559 (OrthoFinder) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDJ91092
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AAC76262	rpsI, b3230	30S ribosomal subunit protein S9 [Ensembl]. Ribosomal...	0.12	OrthoFinder
AAK99076	spr0272, rpsI	30S Ribosomal protein S9 [Ensembl]. Ribosomal protein...	0.05	OrthoFinder
AAL22213	STM3344, rpsI	30S ribosomal subunit protein S9 [Ensembl]. Ribosomal...	0.15	OrthoFinder
ADK86926	rpsI, MPNE_0721	ribosomal protein S9 [Ensembl]. Ribosomal protein S9/S16...	0.05	OrthoFinder
AGT22336	N559_0534	30S ribosomal protein S9 [Ensembl].	0.08	OrthoFinder
AHY40658	rpsI, CJ8421_07405	30S ribosomal protein S9 [Ensembl]. Ribosomal protein...	0.05	OrthoFinder
CBI67039	rpsI, HPB8_1482	small subunit ribosomal protein S9 [Ensembl]. Ribosomal...	0.04	OrthoFinder
CCG27316	No alias	SSU ribosomal protein S9p (S16e) [Ensembl]. Ribosomal...	0.1	OrthoFinder
CCL20598	rpsI, BN171_70038	30S ribosomal protein S9 [Ensembl]. Ribosomal protein...	0.02	OrthoFinder
CCP46264	rpsI, Rv3442c	30S ribosomal protein S9 RpsI [Ensembl]. Ribosomal...	0.05	OrthoFinder
CPD14676	rpsI, ERS093114_02156	30S ribosomal protein S9 [Ensembl]. Ribosomal protein...	0.08	OrthoFinder
CRP09052	rpsI	30S ribosomal protein S9 [Ensembl]. Ribosomal protein...	0.07	OrthoFinder
KNA51830	VCV51_033518	ribosomal protein S9/S16 [Ensembl]. Ribosomal protein...	0.07	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0004820	glycine-tRNA ligase activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
BP	GO:0006426	glycyl-tRNA aminoacylation	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Enrichment
MF	GO:0008915	lipid-A-disaccharide synthase activity	IEP	Enrichment
MF	GO:0008962	phosphatidylglycerophosphatase activity	IEP	Enrichment
MF	GO:0015099	nickel cation transmembrane transporter activity	IEP	Enrichment
BP	GO:0015675	nickel cation transport	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0016791	phosphatase activity	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0032784	regulation of DNA-templated transcription, elongation	IEP	Enrichment
BP	GO:0035444	nickel cation transmembrane transport	IEP	Enrichment
BP	GO:0043094	cellular metabolic compound salvage	IEP	Enrichment
BP	GO:0043174	nucleoside salvage	IEP	Enrichment
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment
BP	GO:1990397	queuosine salvage	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000754	Ribosomal_S9	10	130

External Links

No external refs found!

EDJ91092 (rpsI, CGSHi22421_10137)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation