EDJ91279 (CGSHi22421_02134)

Aliases : CGSHi22421_02134

Description : formate dehydrogenase, iron-sulfur subunit [Ensembl]. 4Fe-4S dicluster domain, Formate dehydrogenase N [Interproscan].

Gene families : OG_02_0001447 (OrthoFinder) Phylogenetic Tree(s): OG0001447_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EDJ91279
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAD13439 fdnH, b1475 formate dehydrogenase-N, Fe-S (beta) subunit,... 0.03 OrthoFinder
AAD13455 fdoH, b3893 formate dehydrogenase-O, Fe-S subunit [Ensembl]. 4Fe-4S... 0.03 OrthoFinder
AAL20487 STM1569, fdnH formate dehydrogenase-N, Fe-S beta subunit [Ensembl].... 0.02 OrthoFinder
AAL22875 STM4036, fdoH formate dehydrogenase-O, Fe-S subunit [Ensembl]. Formate... 0.03 OrthoFinder
CRO50118 fdoH Formate dehydrogenase-O subunit beta [Ensembl]. 4Fe-4S... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Enrichment
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043768 S-ribosylhomocysteine lyase activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR017896 4Fe4S_Fe-S-bd 98 194
IPR015246 Formate_DH_TM 252 294
No external refs found!