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  5. EDJ91355

EDJ91355 (rplD, CGSHi22421_04608)


Aliases : rplD, CGSHi22421_04608

Description : 50S ribosomal protein L4 [Ensembl]. Ribosomal protein L4/L1 family [Interproscan].


Gene families : OG_02_0000487 (OrthoFinder) Phylogenetic Tree(s): OG0000487_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91355
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC76344 rplD, b3319 50S ribosomal subunit protein L4 [Ensembl]. Ribosomal... 0.3 OrthoFinder
AAK98993 spr0189, rplD 50S Ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
AAL22302 STM3439, rplD 50S ribosomal subunit protein L4 [Ensembl]. Ribosomal... 0.32 OrthoFinder
AEA92839 rplD, OG1RF_10152 ribosomal protein L4/L1 family protein [Ensembl].... 0.21 OrthoFinder
AGT22245 N559_0435 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.13 OrthoFinder
AHY40891 rplD, CJ8421_08595 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
AKI50566 rplD, L2625_02776 ribosomal protein L4 [Ensembl]. Ribosomal protein L4/L1e... 0.17 OrthoFinder
AKP15124 rplD, WX61_01070 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
CBI65718 rplD, HPB8_161 large subunit ribosomal protein L4 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCG27380 No alias LSU ribosomal protein L4p (L1e) [Ensembl]. Ribosomal... 0.14 OrthoFinder
CCL20564 rplD, BN171_70004 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
CCP43446 rplD, Rv0702 50S ribosomal protein L4 RplD [Ensembl]. Ribosomal... 0.12 OrthoFinder
CPD13539 rplD, ERS093114_02123 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
CRO73766 rplD 50S ribosomal protein L4 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
KNA54973 VCV51_033156 ribosomal protein L4/L1 family protein [Ensembl].... 0.24 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0009061 anaerobic respiration IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002136 Ribosomal_L4/L1e 12 197
No external refs found!