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  5. EDJ91356

EDJ91356 (rplW, CGSHi22421_04613)


Aliases : rplW, CGSHi22421_04613

Description : 50S ribosomal protein L23 [Ensembl]. Ribosomal protein L23 [Interproscan].


Gene families : OG_02_0000400 (OrthoFinder) Phylogenetic Tree(s): OG0000400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91356
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC76343 rplW, b3318 50S ribosomal subunit protein L23 [Ensembl]. Ribosomal... 0.35 OrthoFinder
AAK98994 spr0190, rplW 50S Ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
AAL22301 STM3438, rplW 50S ribosomal subunit protein L23 [Ensembl]. Ribosomal... 0.39 OrthoFinder
ADK86872 rplW, MPNE_0196 ribosomal protein L23 [Ensembl]. Ribosomal protein L23... 0.19 OrthoFinder
AEA92840 rplW, OG1RF_10153 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
AGT22246 N559_0436 rpL23-SA fusion protein [Ensembl]. 0.18 OrthoFinder
AHY40890 rplW, CJ8421_08590 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
AKI50565 rplW, L2625_02775 ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AKP15125 rplW, WX61_01071 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
CBI65719 rplW, HPB8_162 large subunit ribosomal protein L23 [Ensembl]. Ribosomal... 0.29 OrthoFinder
CCG27381 L23Ae LSU ribosomal protein L23p (L23Ae) [Ensembl]. Ribosomal... 0.27 OrthoFinder
CCL20565 rplW, BN171_70005 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
CCP43447 rplW, Rv0703 50S ribosomal protein L23 RplW [Ensembl]. Ribosomal... 0.2 OrthoFinder
CPD13571 rplW, ERS093114_02124 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
CRO73798 rplW 50S ribosomal protein L23 [Ensembl]. Ribosomal protein... 0.24 OrthoFinder
KNA54974 VCV51_033157 ribosomal protein L23 [Ensembl]. Ribosomal protein L23... 0.27 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR013025 Ribosomal_L25/23 9 94
No external refs found!