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  5. EDJ91357

EDJ91357 (CGSHi22421_04618)


Aliases : CGSHi22421_04618

Description : 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2 [Interproscan].


Gene families : OG_02_0000653 (OrthoFinder) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91357
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC76342 rplB, b3317 50S ribosomal subunit protein L2 [Ensembl]. Ribosomal... 0.3 OrthoFinder
AAK98995 spr0191, rplB 50S Ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.23 OrthoFinder
AAL22300 STM3437, rplB 50S ribosomal subunit protein L2 [Ensembl]. Ribosomal... 0.33 OrthoFinder
ADK87182 rplB, MPNE_0197 ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2... 0.18 OrthoFinder
AHY40889 rplB, CJ8421_08585 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.28 OrthoFinder
AKI50564 rplB, L2625_02774 ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2,... 0.22 OrthoFinder
AKP15126 rplB, WX61_01072 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.09 OrthoFinder
CBI65720 rplB, HPB8_163 large subunit ribosomal protein L2 [Ensembl]. Ribosomal... 0.21 OrthoFinder
CCL20566 rplB, BN171_70006 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.23 OrthoFinder
CCP43448 rplB, Rv0704 50S ribosomal protein L2 RplB [Ensembl]. Ribosomal... 0.15 OrthoFinder
CPD13600 rplB, ERS093114_02125 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.26 OrthoFinder
CRO73845 rplB 50S ribosomal protein L2 [Ensembl]. Ribosomal Proteins... 0.18 OrthoFinder
KNA54975 VCV51_033158 ribosomal protein L2 [Ensembl]. Ribosomal Proteins L2... 0.27 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0009061 anaerobic respiration IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 125 249
IPR022666 Rbsml_prot_L2_RNA-bd_dom 42 116
No external refs found!