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  5. EDJ91358

EDJ91358 (CGSHi22421_04623)


Aliases : CGSHi22421_04623

Description : 30S ribosomal protein S19 [Ensembl]. Ribosomal protein S19 [Interproscan].


Gene families : OG_02_0000486 (OrthoFinder) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91358
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC76341 rpsS, b3316 30S ribosomal subunit protein S19 [Ensembl]. Ribosomal... 0.34 OrthoFinder
AAK98996 spr0192, rpsS 30S Ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
AAL22299 STM3436, rpsS 30S ribosomal subunit protein S19 [Ensembl]. Ribosomal... 0.36 OrthoFinder
ADK87264 rpsS, MPNE_0198 ribosomal protein S19 [Ensembl]. Ribosomal protein S19... 0.18 OrthoFinder
AEA92842 rpsS, OG1RF_10155 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.32 OrthoFinder
AHY40888 rpsS, CJ8421_08580 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
AKI50563 rpsS, L2625_02773 ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
AKP15127 rpsS, WX61_01073 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
CBI65721 rpsS, HPB8_164 small subunit ribosomal protein S19 [Ensembl]. Ribosomal... 0.13 OrthoFinder
CCG27383 No alias SSU ribosomal protein S19p (S15e) [Ensembl]. Ribosomal... 0.23 OrthoFinder
CCL20567 rpsS, BN171_70007 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
CCP43449 rpsS, Rv0705 30S ribosomal protein S19 RpsS [Ensembl]. Ribosomal... 0.21 OrthoFinder
CPD13636 rpsS, ERS093114_02126 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.31 OrthoFinder
CRO73874 rpsS 30S ribosomal protein S19 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
KNA54976 VCV51_033159 ribosomal protein S19 [Ensembl]. Ribosomal protein S19... 0.19 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 3 83
No external refs found!