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  5. EDJ91359

EDJ91359 (rplB, CGSHi22421_04628)


Aliases : rplB, CGSHi22421_04628

Description : 50S ribosomal protein L2 [Ensembl]. Ribosomal protein L22p/L17e [Interproscan].


Gene families : OG_02_0000485 (OrthoFinder) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91359
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC76340 rplV, b3315 50S ribosomal subunit protein L22 [Ensembl]. Ribosomal... 0.26 OrthoFinder
AAK98998 spr0194, rplV 50S Ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.24 OrthoFinder
AAL22298 STM3435, rplV 50S ribosomal subunit protein L22 [Ensembl]. Ribosomal... 0.32 OrthoFinder
ADK86723 rplV, MPNE_0199 ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
AEA92843 rplV, OG1RF_10156 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
AHY40887 rplV, CJ8421_08575 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.28 OrthoFinder
AKI50562 rplV, L2625_02772 ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
AKP15128 rplV, WX61_01074 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CBI65722 rplV, HPB8_165 large subunit ribosomal protein L22 [Ensembl]. Ribosomal... 0.18 OrthoFinder
CCG27384 No alias LSU ribosomal protein L22p (L17e) [Ensembl]. Ribosomal... 0.2 OrthoFinder
CCL20568 rplV, BN171_70008 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
CCP43450 rplV, Rv0706 50S ribosomal protein L22 RplV [Ensembl]. Ribosomal... 0.12 OrthoFinder
CPD13670 rplV, ERS093114_02127 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
CRO73906 rplV 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
KNA54977 VCV51_033160 ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004071 aspartate-ammonia ligase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0009061 anaerobic respiration IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 5 108
No external refs found!