Aliases : rpsC, CGSHi22421_04638
Description : 30S ribosomal protein S3 [Ensembl]. Ribosomal protein L16p/L10e [Interproscan].
Gene families : OG_02_0000399 (OrthoFinder) Phylogenetic Tree(s): OG0000399_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EDJ91361 | |
Cluster | HCCA: Cluster_17 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC76338 | rplP, b3313 | 50S ribosomal subunit protein L16 [Ensembl]. Ribosomal... | 0.3 | OrthoFinder | |
AAK99000 | spr0196, rplP | 50S Ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.22 | OrthoFinder | |
AAL22296 | STM3433, rplP | 50S ribosomal subunit protein L16 [Ensembl]. Ribosomal... | 0.37 | OrthoFinder | |
ADK87106 | rplP, MPNE_0201 | ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.17 | OrthoFinder | |
AEA92845 | rplP, OG1RF_10158 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.29 | OrthoFinder | |
AGT22249 | N559_0441 | 50S ribosomal protein L16 [Ensembl]. | 0.1 | OrthoFinder | |
AHY40885 | rplP, CJ8421_08565 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.25 | OrthoFinder | |
AKI50560 | rplP, L2625_02770 | ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.23 | OrthoFinder | |
AKP15130 | rplP, WX61_01076 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.1 | OrthoFinder | |
CBI65724 | rplP, HPB8_167 | large subunit ribosomal protein L16 [Ensembl]. Ribosomal... | 0.25 | OrthoFinder | |
CCG27386 | No alias | LSU ribosomal protein L16p (L10e) [Ensembl]. Ribosomal... | 0.18 | OrthoFinder | |
CCL20570 | rplP, BN171_70010 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.29 | OrthoFinder | |
CCP43452 | rplP, Rv0708 | 50S ribosomal protein L16 RplP [Ensembl]. Ribosomal... | 0.15 | OrthoFinder | |
CPD13746 | rplP, ERS093114_02129 | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.25 | OrthoFinder | |
CRO73962 | rplP | 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.26 | OrthoFinder | |
KNA54979 | VCV51_033162 | ribosomal protein L16 [Ensembl]. Ribosomal protein... | 0.26 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
BP | GO:0008104 | protein localization | IEP | Enrichment |
BP | GO:0009061 | anaerobic respiration | IEP | Enrichment |
BP | GO:0015031 | protein transport | IEP | Enrichment |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Enrichment |
BP | GO:0017013 | protein flavinylation | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016180 | Ribosomal_L10e/L16 | 4 | 131 |
No external refs found! |