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  5. EDJ91361

EDJ91361 (rpsC, CGSHi22421_04638)


Aliases : rpsC, CGSHi22421_04638

Description : 30S ribosomal protein S3 [Ensembl]. Ribosomal protein L16p/L10e [Interproscan].


Gene families : OG_02_0000399 (OrthoFinder) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91361
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC76338 rplP, b3313 50S ribosomal subunit protein L16 [Ensembl]. Ribosomal... 0.3 OrthoFinder
AAK99000 spr0196, rplP 50S Ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
AAL22296 STM3433, rplP 50S ribosomal subunit protein L16 [Ensembl]. Ribosomal... 0.37 OrthoFinder
ADK87106 rplP, MPNE_0201 ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
AEA92845 rplP, OG1RF_10158 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
AGT22249 N559_0441 50S ribosomal protein L16 [Ensembl]. 0.1 OrthoFinder
AHY40885 rplP, CJ8421_08565 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
AKI50560 rplP, L2625_02770 ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
AKP15130 rplP, WX61_01076 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
CBI65724 rplP, HPB8_167 large subunit ribosomal protein L16 [Ensembl]. Ribosomal... 0.25 OrthoFinder
CCG27386 No alias LSU ribosomal protein L16p (L10e) [Ensembl]. Ribosomal... 0.18 OrthoFinder
CCL20570 rplP, BN171_70010 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
CCP43452 rplP, Rv0708 50S ribosomal protein L16 RplP [Ensembl]. Ribosomal... 0.15 OrthoFinder
CPD13746 rplP, ERS093114_02129 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.25 OrthoFinder
CRO73962 rplP 50S ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
KNA54979 VCV51_033162 ribosomal protein L16 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0009061 anaerobic respiration IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR016180 Ribosomal_L10e/L16 4 131
No external refs found!