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  5. EDJ91368

EDJ91368 (rplE, CGSHi22421_04673)


Aliases : rplE, CGSHi22421_04673

Description : 50S ribosomal protein L5 [Ensembl]. Ribosomal protein L5, ribosomal L5P family C-terminus [Interproscan].


Gene families : OG_02_0000397 (OrthoFinder) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91368
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AAC76333 rplE, b3308 50S ribosomal subunit protein L5 [Ensembl]. Ribosomal... 0.29 OrthoFinder
AAK99005 spr0201, rplE 50S Ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
AAL22291 STM3428, rplE 50S ribosomal subunit protein L5 [Ensembl]. Ribosomal... 0.33 OrthoFinder
ADK86675 rplE, MPNE_0206 ribosomal protein L5 [Ensembl]. Ribosomal protein L5,... 0.18 OrthoFinder
AEA92850 rplE, OG1RF_10163 50S ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.24 OrthoFinder
AGT22254 N559_0446 50S ribosomal protein L5 [Ensembl]. ribosomal L5P family... 0.24 OrthoFinder
AHY40880 rplE, CJ8421_08540 50S ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
AKI50555 rplE, L2625_02765 ribosomal protein L5 [Ensembl]. Ribosomal protein L5... 0.25 OrthoFinder
AKP15135 rplE, WX61_01081 50S ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
CBI65729 rplE, HPB8_172 large subunit ribosomal protein L5 [Ensembl]. Ribosomal... 0.11 OrthoFinder
CCG27391 No alias LSU ribosomal protein L5p (L11e) [Ensembl]. Ribosomal... 0.17 OrthoFinder
CCL20575 rplE, BN171_70015 50S ribosomal protein L5 [Ensembl]. ribosomal L5P family... 0.23 OrthoFinder
CCP43460 rplE, Rv0716 50S ribosomal protein L5 RplE [Ensembl]. Ribosomal... 0.16 OrthoFinder
CPD13923 rplE, ERS093114_02134 50S ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
CRO74099 rplE 50S ribosomal protein L5 [Ensembl]. Ribosomal protein... 0.26 OrthoFinder
KNA54984 VCV51_033167 ribosomal L5P family protein [Ensembl]. Ribosomal... 0.2 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR031309 Ribosomal_L5_C 84 177
IPR031310 Ribosomal_L5_N 24 80
No external refs found!