Aliases : CGSHi22421_04728
Description : 30S ribosomal protein S11 [Ensembl]. Ribosomal protein S11 [Interproscan].
Gene families : OG_02_0000561 (OrthoFinder) Phylogenetic Tree(s): OG0000561_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EDJ91379 | |
Cluster | HCCA: Cluster_17 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC76322 | rpsK, b3297 | 30S ribosomal subunit protein S11 [Ensembl]. Ribosomal... | 0.35 | OrthoFinder | |
AAK99018 | spr0214, rpsK | 30S Ribosomal protein S11 [Ensembl]. Ribosomal protein... | 0.17 | OrthoFinder | |
AAL22280 | STM3417, rpsK | 30S ribosomal subunit protein S11 [Ensembl]. Ribosomal... | 0.38 | OrthoFinder | |
ADK86660 | rpsK, MPNE_0219 | 30S ribosomal protein S11 [Ensembl]. | 0.16 | OrthoFinder | |
AEA92863 | rpsK, OG1RF_10176 | 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... | 0.2 | OrthoFinder | |
AHY40766 | CJ8421_07970 | 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... | 0.12 | OrthoFinder | |
AKI50542 | rpsK, L2625_02752 | ribosomal protein S11 [Ensembl]. Ribosomal protein S11... | 0.15 | OrthoFinder | |
CBI65741 | rpsK, HPB8_184 | small subunit ribosomal protein S11 [Ensembl]. Ribosomal... | 0.14 | OrthoFinder | |
CCG27404 | No alias | SSU ribosomal protein S11p (S14e) [Ensembl]. Ribosomal... | 0.13 | OrthoFinder | |
CCL20589 | rpsK, BN171_70029 | 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... | 0.19 | OrthoFinder | |
CCP46281 | rpsK, Rv3459c | 30S ribosomal protein S11 RpsK [Ensembl]. Ribosomal... | 0.15 | OrthoFinder | |
CPD14353 | rpsK, ERS093114_02147 | 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... | 0.29 | OrthoFinder | |
CRO74429 | rpsK | 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... | 0.2 | OrthoFinder | |
KNA54995 | VCV51_033178 | 30S ribosomal protein S11 [Ensembl]. Ribosomal protein... | 0.24 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Enrichment |
MF | GO:0004089 | carbonate dehydratase activity | IEP | Enrichment |
MF | GO:0004140 | dephospho-CoA kinase activity | IEP | Enrichment |
MF | GO:0004455 | ketol-acid reductoisomerase activity | IEP | Enrichment |
BP | GO:0008033 | tRNA processing | IEP | Enrichment |
MF | GO:0008097 | 5S rRNA binding | IEP | Enrichment |
MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Enrichment |
BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0015936 | coenzyme A metabolic process | IEP | Enrichment |
BP | GO:0015937 | coenzyme A biosynthetic process | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
BP | GO:0043094 | cellular metabolic compound salvage | IEP | Enrichment |
BP | GO:0043174 | nucleoside salvage | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:1990397 | queuosine salvage | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001971 | Ribosomal_S11 | 19 | 128 |
No external refs found! |