EDJ91415 (CGSHi22421_04908)

Aliases : CGSHi22421_04908

Description : fumarate reductase iron-sulfur subunit [Ensembl]. 4Fe-4S dicluster domain, 2Fe-2S iron-sulfur cluster binding domain [Interproscan].

Gene families : OG_02_0000322 (OrthoFinder) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EDJ91415
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC73818 sdhB, b0724 succinate dehydrogenase, FeS subunit [Ensembl]. 4Fe-4S... 0.04 OrthoFinder
AAC77113 frdB, b4153 fumarate reductase (anaerobic), Fe-S subunit [Ensembl].... 0.08 OrthoFinder
AAL19679 STM0735, sdhB succinate dehydrogenase, Fe-S protein [Ensembl]. 4Fe-4S... 0.05 OrthoFinder
AAL23165 STM4342, frdB fumarate reductase [Ensembl]. 4Fe-4S dicluster domain,... 0.07 OrthoFinder
AGT25240 N559_3593 succinate dehydrogenase iron-sulfur subunit [Ensembl].... 0.04 OrthoFinder
AGT26332 N559_4741 fumarate reductase iron-sulfur subunit [Ensembl]. 2Fe-2S... 0.05 OrthoFinder
AHY39666 frdB, CJ8421_02055 fumarate reductase iron-sulfur subunit [Ensembl]. 4Fe-4S... 0.04 OrthoFinder
AHY39694 CJ8421_02195 succinate dehydrogenase, iron-sulfur protein subunit... 0.03 OrthoFinder
KNA54919 VCV51_031783 succinate dehydrogenase and fumarate reductase... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006106 fumarate metabolic process IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016841 ammonia-lyase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019645 anaerobic electron transport chain IEP Enrichment
MF GO:0043546 molybdopterin cofactor binding IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR025192 Succ_DH/fum_Rdtase_N 9 111
IPR017896 4Fe4S_Fe-S-bd 157 230
No external refs found!